source: plugins/base2/net.sf.basedb.normalizers/trunk/src/c++/bin/qQN.cc @ 989

// $Id: qQN.cc 989 2009-03-14 10:55:23Z jari $

/*
  Copyright (C) 2009 Jari Häkkinen

  This file is part of the Normalizers plug-in package for BASE
  (net.sf.based.normalizers). The package is available at
  http://baseplugins.thep.lu.se/ BASE main site is
  http://base.thep.lu.se/

  This is free software; you can redistribute it and/or modify it
  under the terms of the GNU General Public License as published by
  the Free Software Foundation; either version 3 of the License, or
  (at your option) any later version.

  The software is distributed in the hope that it will be useful, but
  WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
  General Public License for more details.

  You should have received a copy of the GNU General Public License
  along with this program. If not, see <http://www.gnu.org/licenses/>.
*/

#include "yat/normalizer/ColumnNormalizer.h"
#include "yat/normalizer/qQuantileNormalizer.h"

#include "yat/utility/Matrix.h"

#include <fstream>
#include <iostream>

using namespace theplu::yat;

int main(int argc, char* argv[])
{  
  using namespace normalizer;

  utility::Matrix m(std::cin,'\t');
  utility::Matrix result(m.rows(),m.columns());
  qQuantileNormalizer qqn(m.begin_column(0), m.end_column(0),100);
  ColumnNormalizer<qQuantileNormalizer> cn(qqn);
  cn(m,result);
  std::cout << result << std::endl;

  return 0;
}