source: trunk/se/lu/thep/affymetrix/Makefile @ 290

# $Id: Makefile 289 2007-05-22 15:33:49Z peter $

# ======================================================================
# Copyright (C) 2006 Jari Häkkinen
# Copyright (C) 2007 Peter Johansson
#
# This file is part of RMAExpress plug-in for BASE,
# http://baseplugins.thep.lu.se/wiki/thep.lu.se.RMAExpressPlugIn
#
# RMAExpress plug-in for BASE is free software; you can redistribute it
# and/or modify it under the terms of the GNU General Public License as
# published by the Free Software Foundation; either version 2 of the
# License, or (at your option) any later version.
#
# RMAExpress plug-in for BASE is distributed in the hope that it will be
# useful, but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
# General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307,
# USA.
# ======================================================================
#
# Maintainer and advanced user information.
#
# 'make' will compile the source and create the jar file assuming that
# the BASE application is located in BASEROOT defined below, and in
# consequnce use BASECORE defined below as the BASE2Core.jar file.
#
# 'make BASEROOT=dir' can be used to point to where the BASE
# application is installed. BASECORE and PLUGINDIR will be changed
# accordingly.
#
# 'make BASECORE=/path/to/BASE2Core.jar' can be used to set the
# BASE2Core.jar file independently of the BASE appication root.
#
# 'make RELPLUGINDIR=dir install' sets the plug-in installation
# directory location relative to BASE root when installing the
# plug-in. If the plug-dir location should be outside of the BASE
# directory hierarchy use 'make PLUGINDIR=dir'.
#
# 'make PLUGINDIR=dir install' sets the plug-in installation directory
# location independently of BASE root when installing the plug-in.
#
# 'make dist' with optional BASEROOT or BASECORE will create binary
# distribution and source distribution packages with corresponding
# md5sum files. 
#

VERSION = pre0.6

SRCDIR = .src
TOPDIR = ../../../..

# Prefix for where to install the plug-in. This is normally the path
# to BASE
BASEROOT ?= /usr/local/base

# Location of BASE2Core.jar. This is usually
# $(BASEROOT)/www/WEB-INF/lib/BASE2Core.jar
BASECORE ?= $(BASEROOT)/www/WEB-INF/lib/BASE2Core.jar

# The directory, relative to $(BASEROOT), where to install the plug-in
RELPLUGINDIR ?= www/plugins/se/lu/thep/affymetrix
PLUGINDIR ?= $(BASEROOT)/$(RELPLUGINDIR)

JAVA = RMAExpress.java Plier.java
CLASS = $(JAVA:.java=.class)
JAR  = affymetrix.jar

# Files to include in binary distributions
BINDISTFILES = AUTHORS ChangeLog COPYING INSTALL Makefile README $(JAR)
# Binary package name
BINPACKAGEFILE = base_affymetrix_plugin-$(VERSION)
# Files to include in binary distributions
SRCDISTFILES = AUTHORS ChangeLog COPYING INSTALL Makefile README $(JAVA)
# Binary package name
SRCPACKAGEFILE = $(BINPACKAGEFILE)-src

all: $(SRCDIR) $(JAR)

clean:; @(rm -rf *.jar *.class *~ $(SRCDIR)\
  $(BINPACKAGEFILE) $(BINPACKAGEFILE).tar.gz $(BINPACKAGEFILE).tar.gz.MD5 \
  $(SRCPACKAGEFILE) $(SRCPACKAGEFILE).tar.gz $(SRCPACKAGEFILE).tar.gz.MD5 ) 

dist: clean all 
  @echo Creating dist files
  @mkdir $(BINPACKAGEFILE)
  @cp -p $(BINDISTFILES) $(BINPACKAGEFILE)
  @tar zcf $(BINPACKAGEFILE).tar.gz $(BINPACKAGEFILE)
  @md5sum $(BINPACKAGEFILE).tar.gz > $(BINPACKAGEFILE).tar.gz.MD5
  @mkdir $(SRCPACKAGEFILE)
  @cp -p $(SRCDISTFILES) $(SRCPACKAGEFILE)
  @tar zcf $(SRCPACKAGEFILE).tar.gz $(SRCPACKAGEFILE)
  @md5sum $(SRCPACKAGEFILE).tar.gz > $(SRCPACKAGEFILE).tar.gz.MD5

.PHONY: all clean dist install install-precompiled 

install: all install-precompiled

install-precompiled:
  @install -d $(PLUGINDIR)
  install -p $(JAR) $(PLUGINDIR)

$(JAR): $(CLASS)
  @echo Creating $(JAR)
  @( cd $(TOPDIR) ; \
    jar cf se/lu/thep/affymetrix/$(JAR) se/lu/thep/affymetrix/*.class )

$(SRCDIR)/%.java: %.java Makefile
  @sed -e 's/@version.*/@version $(VERSION)/' \
  "$<" > "$@"; \

%.class: $(SRCDIR)/%.java
  javac -cp $(BASECORE) -d $(TOPDIR) $<

$(SRCDIR):
  mkdir $@