Changeset 1049

Timestamp:

May 6, 2009, 9:20:59 AM (14 years ago)

Author:

Jari Häkkinen

Message:

Addresses #206. Last commit destroyed nan fixing in changeset:1045 for some cases of reference selection, the nan fix is now restored.

File:

• plugins/base2/net.sf.basedb.normalizers/trunk/src/c++/bin/qQN.cc (modified) (2 diffs)

plugins/base2/net.sf.basedb.normalizers/trunk/src/c++/bin/qQN.cc

@@ -135 +135 @@
   while (getline(is, line)) {
     size_t found=line.find("yes");
+
     if (found!=std::string::npos) {
+      // use this assay as a part of reference
       for (size_t row=0; row<m.rows(); ++row)
         if (m(row,column).weight()) { // weight either 0 or 1
@@ -144 +146 @@
           m(row,column).data()=0;
     }
+    else
+      // this assay as not a part of the reference but fix nan
+      for (size_t row=0; row<m.rows(); ++row)
+        if (!m(row,column).weight()) // weight either 0 or 1
+          m(row,column).data()=0;
+
     ++column;
     if (column>m.columns())