Changeset 1097


Ignore:
Timestamp:
May 28, 2009, 9:37:09 AM (12 years ago)
Author:
Martin Svensson
Message:

References #180. The plot-extension is almost done. How the spot data should be plotted is not decieded yet.

Location:
plugins/base2/net.sf.basedb.illumina/trunk
Files:
4 added
5 edited

Legend:

Unmodified
Added
Removed
  • plugins/base2/net.sf.basedb.illumina/trunk/COMPILE

    r810 r1097  
    12122. Java 1.6
    1313
    14 3. BASE 2.9.0
     143. BASE 2.12.0
    1515
    1616---------
     
    20201. Type `ant download-lib` to automatically download the BASE core JAR file that
    2121   are neeed for compilation. You can also do this manually by copying the
    22    BASE2Core.jar, BASE2CorePlugins.jar and BASE2WSClient.jar files from the
     22   BASE2Core.jar, BASE2CorePlugins.jar, BASE2Webclient.jar and BASE2WSClient.jar files from the
    2323   BASE installation directory (<basedir>/www/WEB-INF/lib/) to the ./lib/compile
    2424   directory.
  • plugins/base2/net.sf.basedb.illumina/trunk/INSTALL

    r959 r1097  
    2727== Requirements ==
    2828
    29  1. BASE 2.9.0 or later.
     29 1. BASE 2.12.0 or later.
    3030
    3131
  • plugins/base2/net.sf.basedb.illumina/trunk/README

    r1093 r1097  
    2424== Requirements ==
    2525
    26  1. BASE 2.9.0 or later.
     26 1. BASE 2.12.0 or later.
    2727 
    2828For expression experiments:
  • plugins/base2/net.sf.basedb.illumina/trunk/build.xml

    r1032 r1097  
    2424  <property name="javac.encoding" value="UTF-8" />
    2525  <property name="depend.jars"
    26     value="http://base2.thep.lu.se/base/jars/2.9.0"
     26    value="http://base2.thep.lu.se/base/jars/2.12.0"
    2727    description="The location of the BASE core JARs that we depend on"
    2828  />
     
    9595    >
    9696    <property name="jar" value="${name}.jar" />
     97    <property name="jar.extensions" value="illumina-extensions.jar" />
    9798    <mkdir dir="${build}" />
    9899    <javac
     
    108109    </javac>
    109110    <copy todir="${build}">
    110       <fileset dir="." includes="META-INF/*" />
     111      <fileset dir="." includes="META-INF/*"/>
    111112    </copy>
    112113    <replace token="%%plugins.jar%%" value="${jar}" file="${build}/META-INF/base-plugins.xml" />
    113114    <jar
    114115      jarfile="${dist}/${jar}"
    115       basedir="${build}" 
     116      basedir="${build}"
    116117      >
    117     </jar>
     118    </jar>     
    118119  </target>
    119120 
    120121  <target
    121122    name="checkjar"
    122     description="Checks that the BASE2Core.jar, BASE2CorePlugins.jar and BASE2WSClient.jar exists."
     123    description="Checks that the BASE2Core.jar, BASE2Webclient, BASE2CorePlugins.jar and BASE2WSClient.jar exists."
    123124    >
    124125    <available classname="net.sf.basedb.core.Application"
     
    128129    <available classname="net.sf.basedb.ws.client.SessionClient"
    129130      classpathref="classpath" property="base2wsclient" />
     131    <available classname="net.sf.basedb.clients.web.extensions.menu.FixedMenuItemFactory"
     132      classpathref="classpath" property="base2web" />
    130133    <fail unless="base2core" message="Can't find BASE2Core.jar in ./lib/compile. Try 'ant download-lib' to download the missing file." />
    131134    <fail unless="base2coreplugins" message="Can't find BASE2CorePlugins.jar in ./lib/compile. Try 'ant download-lib' to download the missing file." />
    132135    <fail unless="base2wsclient" message="Can't find BASE2WSClient.jar in ./lib/compile. Try 'ant download-lib' to download the missing file." />
    133     <echo>Found BASE2Core.jar, BASE2CorePlugins.jar, and BASE2WSClient.jar.</echo>
     136    <fail unless="base2web" message="Can't find BASE2Webclient.jar in ./lib/compile. Try 'ant download-lib' to download the missing file." />
     137    <echo>Found BASE2Core.jar, BASE2CorePlugins.jar, BASE2Webclient.jar and BASE2WSClient.jar.</echo>
    134138  </target>
    135139
     
    148152    <download-lib file="BASE2CorePlugins.jar" />
    149153    <download-lib file="BASE2WSClient.jar" />
     154    <download-lib file="BASE2Webclient.jar" />
    150155  </target>
    151156 
  • plugins/base2/net.sf.basedb.illumina/trunk/lib/compile

    • Property svn:ignore
      •  

        old new  
        22BASE2CorePlugins.jar
        33BASE2WSClient.jar
         4BASE2Webclient.jar
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