Ignore:
Timestamp:
Jun 5, 2009, 1:53:03 PM (14 years ago)
Author:
Nicklas Nordborg
Message:

References #218: Proof-of-concept: run a selected GenePattern? module from BASE

It works! But...

  • There is very little error handling.
  • There is no integration with exporters.
  • File selection must be made manually. The default choices made by BASE are poor.
  • Results files are imported back to a child bioassay set. There is not much to do with them except to look at them in a text editor.
  • Lots of other possible enhancments... for example aborting a job...


Location:
extensions/net.sf.basedb.genepattern/trunk
Files:
1 added
1 edited

Legend:

Unmodified
Added
Removed

  • extensions/net.sf.basedb.genepattern/trunk/META-INF/base-plugins.xml

    r1091 r1110  
    66    <hasconfigurations/>
    77  </pluginclass>
     8  <pluginclass classname="net.sf.basedb.genepattern.plugin.GenePatternAnalysisPlugin">
     9    <minbaseversion>2.12</minbaseversion>
     10    <hasconfigurations/>
     11  </pluginclass>
     12  <!--
     13  <pluginclass classname="net.sf.basedb.genepattern.plugin.GenePatternVisualisationPlugin">
     14    <minbaseversion>2.12</minbaseversion>
     15    <hasconfigurations/>
     16  </pluginclass>
     17  -->
    818</plugins>
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