Changeset 1124 for plugins/base2

Timestamp:

Jun 10, 2009, 11:58:43 PM (14 years ago)

Author:

Jari Häkkinen

Message:

Fixes #231.

File:

• plugins/base2/net.sf.basedb.illumina/trunk/src/net/sf/basedb/illumina/plugins/DetectionPValue.java (modified) (1 diff)

plugins/base2/net.sf.basedb.illumina/trunk/src/net/sf/basedb/illumina/plugins/DetectionPValue.java

@@ -522 +522 @@
           }
           dri.close();
+          if (sortedControlIntensity.length==0)
+          {
+            throw new BaseException("No negative controls in bioassayset. Cannot " +
+                                    "calculate P-values (see documentation for details)");
+          }
           int[] controlStartStop =  locateOutlierBoundary(sortedControlIntensity, 
             (Float)job.getValue(outlierParameter.getName()));