Changeset 1187


Ignore:
Timestamp:
Feb 11, 2010, 11:01:57 AM (13 years ago)
Author:
Nicklas Nordborg
Message:

Fixes #257: Fix issues with the BGX reporter importer due to changes in the core api of BASE 2.15

File:
1 edited

Legend:

Unmodified
Added
Removed
  • plugins/base2/net.sf.basedb.illumina/trunk/src/net/sf/basedb/illumina/plugins/BgxReporterImporter.java

    r1146 r1187  
    110110  private Section currentSection;
    111111 
    112   private ParameterValuesProxy confProxy;
     112  private ParameterValuesProxy jobParameterProxy;
    113113 
    114114  public BgxReporterImporter()
     
    127127  public void init(SessionControl sc, ParameterValues configuration, ParameterValues job)
    128128  {
    129     this.confProxy = new ParameterValuesProxy(configuration);
    130     super.init(sc, this.confProxy, job);
     129    this.jobParameterProxy = job == null ? null : new ParameterValuesProxy(job);
     130    super.init(sc, configuration, this.jobParameterProxy);
    131131  }
    132132  // -------------------------------------------
     
    229229      override.put("extendedColumnMapping.controlGroupId", "\\Reporter_Group_id\\");
    230230      override.put("extendedColumnMapping.controlCompositeMap", "\\Reporter_Composite_map\\");
    231       confProxy.setOverride(override);
     231      jobParameterProxy.setOverride(override);
    232232    }
    233233    else
    234234    {
    235       confProxy.setOverride(null);
     235      jobParameterProxy.setOverride(null);
    236236    }
    237237  }
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