Changeset 1217


Ignore:
Timestamp:
Mar 26, 2010, 2:15:39 PM (12 years ago)
Author:
Jari Häkkinen
Message:

Addresses #248 and #252. Updated description to describe new features.

File:
1 edited

Legend:

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  • plugins/base2/net.sf.basedb.illumina/trunk/src/net/sf/basedb/illumina/plugins/BackgroundCorrection.java

    r1211 r1217  
    111111      "A spot is considered to be a negative control spot if it has an " +
    112112      "''Control group name'' exactly matching the string ''negative''.\n\n" +
    113       "The only parameter to set is how background intensities should be " +
    114       "calculated. Allowed values are median or mean, i.e. the background is " +
    115       "either the median or the mean of the negative control spots on the " +
    116       "array.\n\n" +
     113      "There is one parameter to set that specifies how background " +
     114      "intensities should be calculated. Allowed values are median or mean, " +
     115      "i.e. the background is either the median or the mean of the negative " +
     116      "control spots on the array.\n\n" +
     117      "The expression of the background probes is optionally saved to a " +
     118      "file. The default is not to save the expression matrix but this can be " +
     119      "changed during job configuration.\n\n" +
    117120      "Please send feedback to " +
    118121      Illumina.EMAIL,
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