Changeset 1867


Ignore:
Timestamp:
Feb 19, 2013, 1:36:13 PM (10 years ago)
Author:
Nicklas Nordborg
Message:

References #422, #423 and other related tickets. Updated @since javadoc annotations to @since 2.12 for new methods and classes.

Location:
extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie
Files:
9 edited

Legend:

Unmodified
Added
Removed
  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/Annotationtype.java

    r1865 r1867  
    331331    selected by wizards for the next processing step. The value
    332332    is a string containing the reason for disabling the item
    333     @since 2.x
     333    @since 2.12
    334334  */
    335335  public static final Annotationtype DISABLE_AUTO_PROCESSING =
     
    340340    pooling schema to use when working with mRNA, cDNA and Library
    341341    plates. It an enumerated string annotation type.
    342     @since 2.x
     342    @since 2.12
    343343  */
    344344  public static final Annotationtype POOL_SCHEMA =
     
    349349    barcode variant to use when working with mRNA, cDNA and Library
    350350    plates. It a string annotation type.
    351     @since 2.x
     351    @since 2.12
    352352  */
    353353  public static final Annotationtype BARCODE_VARIANT =
  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/BiomaterialList.java

    r1865 r1867  
    2020 
    2121  @author nicklas
    22   @since 2.x
     22  @since 2.12
    2323*/
    2424public class BiomaterialList
  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/BioplateEventtype.java

    r1865 r1867  
    2020 
    2121  @author nicklas
    22   @since 2.x
     22  @since 2.12
    2323*/
    2424public class BioplateEventtype
  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/BioplateType.java

    r1865 r1867  
    6161    The definition of the "mRNA reaction plate" type. It is locked to extracts
    6262    of subtype {@link Subtype#MRNA} and uses 8x12 geometry.
    63     @since 2.x
     63    @since 2.12
    6464  */
    6565  public static final BioplateType MRNA =
     
    6969    The definition of the "cDNA reaction plate" type. It is locked to extracts
    7070    of subtype {@link Subtype#CDNA} and uses 8x12 geometry.
    71     @since 2.x
     71    @since 2.12
    7272  */
    7373  public static final BioplateType CDNA =
  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/CDna.java

    r1865 r1867  
    1616 
    1717  @author nicklas
    18   @since 2.x
     18  @since 2.12
    1919*/
    2020public class CDna
  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/MRna.java

    r1865 r1867  
    1616 
    1717  @author nicklas
    18   @since 2.x
     18  @since 2.12
    1919*/
    2020public class MRna
  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/ReactionPlate.java

    r1865 r1867  
    276276    a role is specified, the list is filter to only
    277277    include events where the bioplate has the given role.
    278     @since 2.x
     278    @since 2.12
    279279  */
    280280  public List<BioPlateEvent> findEvents(DbControl dc, String eventType, String role)
  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/Subtype.java

    r1865 r1867  
    153153  /**
    154154    The definition of the "mRNA" extract subtype.
    155     @since 2.x
     155    @since 2.12
    156156  */
    157157  public static final Subtype MRNA = new Subtype("mRNA", Item.EXTRACT, false);
     
    159159  /**
    160160    The definition of the "cDNA" extract subtype.
    161     @since 2.x
     161    @since 2.12
    162162  */
    163163  public static final Subtype CDNA = new Subtype("cDNA", Item.EXTRACT, false);
     
    166166    The definition of the "Library" extract subtype. Should already exist
    167167    in BASE.
    168     @since 2.x
     168    @since 2.12
    169169  */
    170170  public static final Subtype LIBRARY = new Subtype("Library", Item.EXTRACT, false);
     
    172172  /**
    173173    The definition of the "mRNA preparation" protocol subtype.
    174     @since 2.x
     174    @since 2.12
    175175  */
    176176  public static final Subtype MRNA_PROTOCOL = new Subtype("mRNA preparation", Item.PROTOCOL, false);
     
    179179  /**
    180180    The definition of the "cDNA preparation" protocol subtype.
    181     @since 2.x
     181    @since 2.12
    182182  */
    183183  public static final Subtype CDNA_PROTOCOL = new Subtype("cDNA preparation", Item.PROTOCOL, false);
     
    186186    The definition of the "Barcode" subtype for tags. Should already
    187187    exist in BASE.
    188     @since 2.x
     188    @since 2.12
    189189   */
    190190  public static final Subtype BARCODE = new Subtype("Barcode", Item.TAG, false);
  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/servlet/InstallServlet.java

    r1865 r1867  
    741741    Create a Tag with the given options. The tag is created in
    742742    a separate transaction.
    743     @since 2.x
     743    @since 2.12
    744744  */
    745745  public Tag createTag(SessionControl sc, String name, Subtype subtype, String description, PermissionOptions permissions)
     
    776776    <li>message: A descriptive message in case of an error
    777777    </ul>
    778     @since 2.x
     778    @since 2.12
    779779  */
    780780  @SuppressWarnings("unchecked")
     
    990990    Create a bioplate event type with the given options. The bioplate event type is created in
    991991    a separate transaction.
    992     @since 2.x
     992    @since 2.12
    993993  */
    994994  public BioPlateEventType createBioPlateEventType(SessionControl sc, BioplateEventtype def)
     
    10231023    <li>message: A descriptive message in case of an error
    10241024    </ul>
    1025     @since 2.x
     1025    @since 2.12
    10261026  */
    10271027  @SuppressWarnings("unchecked")
     
    11891189    Create a biomaterial list with the given options. The list is created in
    11901190    a separate transaction.
    1191     @since 2.x
     1191    @since 2.12
    11921192  */
    11931193  public BioMaterialList createBioMaterialList(SessionControl sc, BiomaterialList def)
     
    12251225    <li>message: A descriptive message in case of an error
    12261226    </ul>
    1227     @since 2.x
     1227    @since 2.12
    12281228  */
    12291229  @SuppressWarnings("unchecked")
     
    13801380    Create a MIME type with the given options. The type is created in
    13811381    a separate transaction.
    1382     @since 2.x
     1382    @since 2.12
    13831383  */
    13841384  public Extract createExtract(SessionControl sc, String name, Subtype subtype, String description, PermissionOptions permissions)
     
    14141414    <li>message: A descriptive message in case of an error
    14151415    </ul>
    1416     @since 2.x
     1416    @since 2.12
    14171417  */
    14181418  @SuppressWarnings("unchecked")
Note: See TracChangeset for help on using the changeset viewer.