Changeset 1941

Timestamp:

Apr 18, 2013, 2:59:05 PM (10 years ago)

Author:

Nicklas Nordborg

Message:

References #424: Select RNA items for library preparation

Fixed a NullPointerException? when selecting Stratagene, which doesn't have RNAQC child items.

File:

• extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/Rna.java (modified) (1 diff)

extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/Rna.java

@@ -329 +329 @@
   public Float loadRnaQc(DbControl dc)
   {
+    Float rqs = null;
+    Float rin = null;
+    
     Extract qc = findLastRnaQc(dc);
-    
-    Float rqs = (Float)Annotationtype.CA_RQS.getAnnotationValue(dc, qc);
-    Float rin = (Float)Annotationtype.BA_RIN.getAnnotationValue(dc, qc);
-    
-    if (rqs != null) setAnnotation("rqs", rqs);
-    if (rin != null) setAnnotation("rin", rin);
-    
+    if (qc != null)
+    {
+      rqs = (Float)Annotationtype.CA_RQS.getAnnotationValue(dc, qc);
+      rin = (Float)Annotationtype.BA_RIN.getAnnotationValue(dc, qc);
+      if (rqs != null) setAnnotation("rqs", rqs);
+      if (rin != null) setAnnotation("rin", rin);
+    }
     return rqs != null ? rqs : rin;
   }