Changeset 1943

Timestamp:

Apr 19, 2013, 11:37:27 AM (10 years ago)

Author:

Nicklas Nordborg

Message:

References #424: Select RNA items for library preparation

Adding LowQualityScore as a valid value for the Flag annotation.

File:

• extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/servlet/InstallServlet.java (modified) (1 diff)

extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/servlet/InstallServlet.java

@@ -232 +232 @@
         
         jsonChecks.add(checkAnnotationType(dc, Annotationtype.FLAG, 1, 
-            new ValueOptions(Rna.FLAG_NOT_ENOUGH_REMAINING_QUANTITY, Rna.FLAG_MRNA_PLATE_FAILED, Rna.FLAG_CDNA_PLATE_FAILED, Rna.FLAG_LIB_PLATE_FAILED),
+            new ValueOptions(Rna.FLAG_NOT_ENOUGH_REMAINING_QUANTITY, Rna.FLAG_LOW_QUALITY_SCORE,
+              Rna.FLAG_MRNA_PLATE_FAILED, Rna.FLAG_CDNA_PLATE_FAILED, Rna.FLAG_LIB_PLATE_FAILED),
             effectiveOptions, createIfMissing));
         jsonChecks.add(checkAnnotationType(dc, Annotationtype.AUTO_PROCESSING, 1,