Changeset 3829


Ignore:
Timestamp:
Apr 6, 2016, 7:59:57 AM (6 years ago)
Author:
Nicklas Nordborg
Message:

References #875: Soft and hard target amount for NeoPrep?

Added RNAMinimalAmount annotation type.

Location:
extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie
Files:
2 edited

Legend:

Unmodified
Added
Removed
  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/Annotationtype.java

    r3786 r3829  
    696696
    697697  /**
     698    The "RNAMinimalAmount" annotation, used for
     699    protocol (RNANormalization). It is a float annotation type.
     700    @since 4.3
     701  */
     702  public static final Annotationtype RNA_MINIMAL_AMOUNT =
     703    new Annotationtype("RNAMinimalAmount", Type.FLOAT, false, Item.PROTOCOL);
     704 
     705  /**
    698706    The "RNATargetVolume" annotation, used for
    699707    protocol (RNANormalization). It is a float annotation type.
  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/servlet/InstallServlet.java

    r3787 r3829  
    408408       
    409409        jsonChecks.add(checkAnnotationType(dc, Annotationtype.RNA_TARGET_AMOUNT, 1, null, effectivePermissionsUse, createIfMissing));
     410        jsonChecks.add(checkAnnotationType(dc, Annotationtype.RNA_MINIMAL_AMOUNT, 1, null, effectivePermissionsUse, createIfMissing));
    410411        jsonChecks.add(checkAnnotationType(dc, Annotationtype.RNA_TARGET_VOLUME, 1, null, effectivePermissionsUse, createIfMissing));
    411412       
     
    623624       
    624625        jsonChecks.add(checkAnnotationTypeCategory(dc, Subtype.RNA_NORMALIZATION_PROTOCOL, createIfMissing,
    625             Annotationtype.RNA_TARGET_VOLUME, Annotationtype.RNA_TARGET_AMOUNT
     626            Annotationtype.RNA_TARGET_VOLUME, Annotationtype.RNA_TARGET_AMOUNT,
     627            Annotationtype.RNA_MINIMAL_AMOUNT
    626628            ));
    627629       
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