Ignore:
Timestamp:
Dec 4, 2007, 3:46:31 PM (16 years ago)
Author:
mbayer
Message:
  • have tied the interface to the importer plugin class now -- all parameters get picked up fine by the plugin
File:
1 edited

Legend:

Unmodified
Added
Removed

  • branches/uk_ac_ebi_Tab2MageImporter/jsp/uk/ac/ebi/nugo/plugins/experiment.jsp

    r511 r512  
    9999  <!-- ------------------------------------------------------------------------------------------------------------------------------------------------ -->
    100100  <tr>
    101     <td  class="boldText">Quality Control:</td>
    102     <td class="input">
    103 
    104     <table class="noBorder" cellpadding="1">
    105 
    106       <tr class="noBorder">
    107         <td>biological replicate</td>
    108         <td><input type="checkbox" name="biological replicate" value="biological replicate" checked="checked"/></td>
    109       </tr>
    110 
    111       <tr class="noBorder">
    112         <td>dye swap quality control</td>
    113         <td><input type="checkbox" name="dye swap quality control" value="dye swap quality control" /></td>
    114       </tr>
    115 
    116       <tr class="noBorder">
    117         <td>peer review quality control</td>
    118         <td><input type="checkbox" name="peer review quality control" value="peer review quality control" /></td>
    119       </tr>
    120 
    121       <tr class="noBorder">
    122         <td>real time PCR quality control</td>
    123         <td><input type="checkbox" name="real time PCR quality control" value="real time PCR quality control" /></td>
    124       </tr>
    125 
    126       <tr class="noBorder">
    127         <td>reverse transcription PCR quality control</td>
    128         <td><input type="checkbox" name="reverse transcription PCR quality control"
    129           value="reverse transcription PCR quality control" /></td>
    130       </tr>
    131 
    132       <tr class="noBorder">
    133         <td>spike quality control</td>
    134         <td><input type="checkbox" name="spike quality control" value="spike quality control" /></td>
    135       </tr>
    136 
    137       <tr class="noBorder">
    138         <td>technical replicate</td>
    139         <td><input type="checkbox" name="technical replicate" value="technical replicate" /></td>
    140       </tr>
    141 
    142     </table>
    143 
    144   </td>
    145   <td>A list of terms taken from the <a href="http://mged.sourceforge.net/ontologies/MGEDontology.php" target="new">MGED ontology</a>. Multiple values can be selected.</td>
    146   </tr>
    147  
     101    <td class="boldText">Quality Control:</td>
     102    <td class="input"><select multiple name="qualityControl">
     103      <option selected="selected">biological replicate</option>
     104      <option>dye swap quality control</option>
     105      <option>peer review quality control</option>
     106      <option>real time PCR quality control</option>
     107      <option>reverse transcription PCR quality control</option>
     108      <option selected="selected">spike quality control</option>
     109      <option>technical replicate</option>
     110    </select></td>
     111    <td>A list of terms taken from the <a href="http://mged.sourceforge.net/ontologies/MGEDontology.php" target="new">MGED
     112    ontology</a>. Multiple values can be selected by holding down the Ctrl key and clicking on items.</td>
     113  </tr>
     114
    148115  <!-- ------------------------------------------------------------------------------------------------------------------------------------------------ -->
    149116  <tr>
    … …  
    159126          title="Show/hide items"> <img src="<%= request.getContextPath()%>/plugins/uk/ac/ebi/nugo/plugins/show.gif" border="0" id="buttonBiologicalProperty"
    160127          name="buttonBiologicalProperty" /></a> <!-- begin div containing hidden items -->
    161         <div id="BiologicalProperty" style="display:none"><select multiple="multiple">
     128        <div id="BiologicalProperty" style="display:none"><select multiple="multiple" name="biologicalProperty">
    162129          <option selected="selected">cell_component_comparison_design</option>
    163130          <option>cell_cycle_design</option>
    … …  
    185152          title="Show/hide items"> <img src="<%= request.getContextPath()%>/plugins/uk/ac/ebi/nugo/plugins/show.gif" border="0" id="buttonBioMolecularAnnotation"
    186153          name="buttonBioMolecularAnnotation" /></a> <!-- begin div containing hidden items -->
    187         <div id="BioMolecularAnnotation" style="display:none"><select multiple="multiple">
     154        <div id="BioMolecularAnnotation" style="display:none"><select multiple="multiple" name="bioMolecularAnnotation">
    188155          <option selected="selected">RNA_stability_design</option>
    189156          <option>binding_site_identification_design</option>
    … …  
    205172        <td><a onclick="showHideItems('EpidemiologicalDesign', 'buttonEpidemiologicalDesign');" title="Show/hide items">
    206173        <img src="<%= request.getContextPath()%>/plugins/uk/ac/ebi/nugo/plugins/show.gif" border="0" id="buttonEpidemiologicalDesign" name="buttonEpidemiologicalDesign" /></a> <!-- begin div containing hidden items -->
    207         <div id="EpidemiologicalDesign" style="display:none"><select multiple="multiple">
     174        <div id="EpidemiologicalDesign" style="display:none"><select multiple="multiple" name="epidemiologicalDesign">
    208175          <option>clinical_history_design</option>
    209176          <option>disease_state_design</option>
    … …  
    218185        <td><a onclick="showHideItems('MethodologicalDesign', 'buttonMethodologicalDesign');" title="Show/hide items">
    219186        <img src="<%= request.getContextPath()%>/plugins/uk/ac/ebi/nugo/plugins/show.gif" border="0" id="buttonMethodologicalDesign" name="buttonMethodologicalDesign" /></a> <!-- begin div containing hidden items -->
    220         <div id="MethodologicalDesign" style="display:none"><select multiple="multiple">
     187        <div id="MethodologicalDesign" style="display:none"><select multiple="multiple" name="methodologicalDesign">
    221188          <option>all_pairs</option>
    222189          <option>array_platform_variation_design</option>
    … …  
    245212        <td><a onclick="showHideItems('PerturbationalDesign', 'buttonPerturbationalDesign');" title="Show/hide items">
    246213        <img src="<%= request.getContextPath()%>/plugins/uk/ac/ebi/nugo/plugins/show.gif" border="0" id="buttonPerturbationalDesign" name="buttonPerturbationalDesign" /></a> <!-- begin div containing hidden items -->
    247         <div id="PerturbationalDesign" style="display:none"><select multiple="multiple">
     214        <div id="PerturbationalDesign" style="display:none"><select multiple="multiple" name="perturbationalDesign">
    248215          <option>cellular_modification_design</option>
    249216          <option>compound_treatment_design</option>
    … …  
    266233        <td><a onclick="showHideItems('TechnologicalDesign', 'buttonTechnologicalDesign');" title="Show/hide items">
    267234        <img src="<%= request.getContextPath()%>/plugins/uk/ac/ebi/nugo/plugins/show.gif" border="0" id="buttonTechnologicalDesign" name="TechnologicalDesign" /></a> <!-- begin div containing hidden items -->
    268         <div id="TechnologicalDesign" style="display:none"><select multiple="multiple">
     235        <div id="TechnologicalDesign" style="display:none"><select multiple="multiple" name="technologicalDesign">
    269236          <option>binding_site_identification_design</option>
    270237          <option>cellular_modification_design</option>
    … …  
    280247    </td>
    281248    <td>A list of terms taken from the <a href="http://mged.sourceforge.net/ontologies/MGEDontology.php" target="new">MGED ontology</a>.
    282      Multiple values can be selected.
    283249    <p>Click "expand" for an item to see list boxes with specific choices.<br>
    284     Hold down the 'Ctrl' key and click to select multiple options.
     250    Multiple values can be selected by holding down the Ctrl key and clicking on items.
    285251    </td>
    286252  </tr>
    … …  
    307273  <tr>
    308274    <td class="boldText">Release Date:</td>
    309     <td class="input"><input type="text" size="10" name="" value="2007-12-03" /></td>
     275    <td class="input"><input type="text" size="10" name="releaseDate" value="2007-12-03" /></td>
    310276    <td>Date for public release, in the format YYYY-MM-DD.</td>
    311277  </tr>
    … …  
    352318      <tr class="noBorder">
    353319        <td>Journal:</td>
    354         <td class="input"><textarea rows="2" cols="30" name="journal">The Journal of Unreproducible Results</textarea></td>
     320        <td class="input"><textarea rows="2" cols="30" name="journal">The Journal of Irreproducible Results</textarea></td>
    355321        <td></td>
    356322      </tr>
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