Changeset 578

Timestamp:

Feb 8, 2008, 2:21:03 PM (15 years ago)

Author:

Martin Svensson

Message:

Fixes #90 Create array design from a bgx-file.

File:

• trunk/net/sf/basedb/illumina/src/net/sf/basedb/illumina/plugins/BgxFeatureImporter.java (modified) (2 diffs)

trunk/net/sf/basedb/illumina/src/net/sf/basedb/illumina/plugins/BgxFeatureImporter.java

@@ -74 +74 @@
     "Illumina BGX feature importer", 
     "Plugin that imports features from a Illumina BGX-file." +
-    "Both compressed(gzip) and uncompressed files are supported.",
+    "Both compressed(gzip) and uncompressed files are supported." +
+    "None of the mappings for the file's [CONTROLS] section are configurable. " +
+    "These are set like follows:\n" +
+    "Identify features by->FEATURE_ID\nReporter ID->\\Probe_Id\\\nFeature ID->\\Array_Address_Id\\\n" +
+    "Reg exp for data header is preconfigured to 'Probe_Id\\tArray_Address_Id.*'",
     Illumina.VERSION,
     Illumina.COPYRIGHT,
@@ -81 +85 @@
     Illumina.URL
   );
-  
   /**
     Needed for progress reporting when reading from a compressed