Changeset 5793

Timestamp:

Dec 16, 2019, 11:30:03 AM (3 years ago)

Author:

Nicklas Nordborg

Message:

References #1215: Include mutation signature analysis in the variant calling pipeline

0-pad names so that we get MutationSignature01 instead. It is nicer to have the annotations sorted in the expected order.

File:

• extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/Annotationtype.java (modified) (1 diff)

extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/dao/Annotationtype.java

@@ -1895 +1895 @@
       synchronized(mutationSignatures)
       {
-        signature = new Annotationtype("MutationSignature" + index, Type.FLOAT, false, Item.RAWBIOASSAY);
+        signature = new Annotationtype("MutationSignature"+(index < 10 ? "0" : "")+index, Type.FLOAT, false, Item.RAWBIOASSAY);
         mutationSignatures.put(index, signature);
       }