Changeset 5808

Timestamp:

Jan 10, 2020, 10:56:21 AM (2 years ago)

Author:

Nicklas Nordborg

Message:

References #1216: Finalize the "Confirm MIPs demux" wizard

The read string construction seems to work as expected.

File:

• extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/servlet/DemuxMergeServlet.java (modified) (1 diff)

extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/servlet/DemuxMergeServlet.java

@@ -744 +744 @@
         else if (pipeline == Pipeline.MIPS)
         {
-          // TODO -- values found from example demux script (MiSeq) 
-          // verify that the rules are valid for HiSeq/NextSeq
-          
           // First read converted to 4M(x-4)T
           if (cycles[read1] > 0) readString.append("4M").append(cycles[read1]-4).append("T");