Changeset 784
- Timestamp:
- Sep 18, 2008, 9:53:24 PM (14 years ago)
- Location:
- plugins/base1/se.lu.onk.ReplicateError/trunk
- Files:
-
- 15 edited
Legend:
- Unmodified
- Added
- Removed
-
plugins/base1/se.lu.onk.ReplicateError/trunk/build.xml
r773 r784 17 17 The software is distributed in the hope that it will be useful, 18 18 but WITHOUT ANY WARRANTY; without even the implied warranty of 19 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. 19 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 20 20 General Public License for more details. 21 21 -
plugins/base1/se.lu.onk.ReplicateError/trunk/lib/AAindex.html
r766 r784 1 1 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Frameset//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-frameset.dtd"> 2 2 3 <!-- $Id$ --> 3 <!-- 4 $Id$ 5 6 Copyright (C) 2005, 2006 Johan Enell 7 Copyright (C) 2008 Jari Hakkinen 8 9 This file is part of the se.lu.onk.ReplicateError plug-in for 10 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 11 site is http://base.thep.lu.se 12 13 This is free software; you can redistribute it and/or modify it 14 under the terms of the GNU General Public License as published by 15 the Free Software Foundation; either version 3 of the License, or 16 (at your option) any later version. 17 18 The software is distributed in the hope that it will be useful, 19 but WITHOUT ANY WARRANTY; without even the implied warranty of 20 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 21 General Public License for more details. 22 23 You should have received a copy of the GNU General Public License 24 along with BASE. If not, see <http://www.gnu.org/licenses/>. 25 --> 4 26 5 27 <html> -
plugins/base1/se.lu.onk.ReplicateError/trunk/lib/AAtabs.html
r766 r784 1 1 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Frameset//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-frameset.dtd"> 2 2 3 <!-- $Id$ --> 3 <!-- 4 $Id$ 5 6 Copyright (C) 2005, 2006 Johan Enell 7 Copyright (C) 2008 Jari Hakkinen 8 9 This file is part of the se.lu.onk.ReplicateError plug-in for 10 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 11 site is http://base.thep.lu.se 12 13 This is free software; you can redistribute it and/or modify it 14 under the terms of the GNU General Public License as published by 15 the Free Software Foundation; either version 3 of the License, or 16 (at your option) any later version. 17 18 The software is distributed in the hope that it will be useful, 19 but WITHOUT ANY WARRANTY; without even the implied warranty of 20 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 21 General Public License for more details. 22 23 You should have received a copy of the GNU General Public License 24 along with BASE. If not, see <http://www.gnu.org/licenses/>. 25 --> 4 26 5 27 <html> -
plugins/base1/se.lu.onk.ReplicateError/trunk/lib/WAindex.html
r766 r784 1 1 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Frameset//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-frameset.dtd"> 2 2 3 <!-- $Id$ --> 3 <!-- 4 $Id$ 5 6 Copyright (C) 2005, 2006 Johan Enell 7 Copyright (C) 2008 Jari Hakkinen 8 9 This file is part of the se.lu.onk.ReplicateError plug-in for 10 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 11 site is http://base.thep.lu.se 12 13 This is free software; you can redistribute it and/or modify it 14 under the terms of the GNU General Public License as published by 15 the Free Software Foundation; either version 3 of the License, or 16 (at your option) any later version. 17 18 The software is distributed in the hope that it will be useful, 19 but WITHOUT ANY WARRANTY; without even the implied warranty of 20 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 21 General Public License for more details. 22 23 You should have received a copy of the GNU General Public License 24 along with BASE. If not, see <http://www.gnu.org/licenses/>. 25 --> 4 26 5 27 <html> -
plugins/base1/se.lu.onk.ReplicateError/trunk/lib/WAtabs.html
r766 r784 1 1 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Frameset//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-frameset.dtd"> 2 2 3 <!-- $Id$ --> 3 <!-- 4 $Id$ 5 6 Copyright (C) 2005, 2006 Johan Enell 7 Copyright (C) 2008 Jari Hakkinen 8 9 This file is part of the se.lu.onk.ReplicateError plug-in for 10 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 11 site is http://base.thep.lu.se 12 13 This is free software; you can redistribute it and/or modify it 14 under the terms of the GNU General Public License as published by 15 the Free Software Foundation; either version 3 of the License, or 16 (at your option) any later version. 17 18 The software is distributed in the hope that it will be useful, 19 but WITHOUT ANY WARRANTY; without even the implied warranty of 20 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 21 General Public License for more details. 22 23 You should have received a copy of the GNU General Public License 24 along with BASE. If not, see <http://www.gnu.org/licenses/>. 25 --> 4 26 5 27 <html> -
plugins/base1/se.lu.onk.ReplicateError/trunk/lib/base.css
r766 r784 1 <!-- $Id$ --> 1 <!-- 2 $Id$ 3 4 Copyright (C) 2005 Johan Enell 5 6 This file is part of the se.lu.onk.ReplicateError plug-in for 7 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 8 site is http://base.thep.lu.se 9 10 This is free software; you can redistribute it and/or modify it 11 under the terms of the GNU General Public License as published by 12 the Free Software Foundation; either version 3 of the License, or 13 (at your option) any later version. 14 15 The software is distributed in the hope that it will be useful, 16 but WITHOUT ANY WARRANTY; without even the implied warranty of 17 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 18 General Public License for more details. 19 20 You should have received a copy of the GNU General Public License 21 along with BASE. If not, see <http://www.gnu.org/licenses/>. 22 --> 2 23 3 24 a:active { text-decoration: none; color: #ff5050; } -
plugins/base1/se.lu.onk.ReplicateError/trunk/lib/runAA
r766 r784 1 1 #!/bin/bash - 2 3 # $Id$ 2 # 3 # $Id$ 4 # 5 # Copyright (C) 2005 Johan Enell 6 # Copyright (C) 2008 Jari Häkkinen 7 # 8 # This file is part of the se.lu.onk.MergeBioAssay plug-in for 9 # BASE. Available at http://baseplugins.thep.lu.se/ and BASE web site 10 # is http://base.thep.lu.se 11 # 12 # This is free software; you can redistribute it and/or modify it 13 # under the terms of the GNU General Public License as published by 14 # the Free Software Foundation; either version 3 of the License, or 15 # (at your option) any later version. 16 # 17 # The software is distributed in the hope that it will be useful, but 18 # WITHOUT ANY WARRANTY; without even the implied warranty of 19 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 20 # General Public License for more details. 21 # 22 # You should have received a copy of the GNU General Public License 23 # along with BASE. If not, see <http://www.gnu.org/licenses/>. 24 # 4 25 5 26 progdir="`dirname \"$0\"`" -
plugins/base1/se.lu.onk.ReplicateError/trunk/lib/runWA
r766 r784 1 1 #!/bin/bash - 2 3 # $Id$ 2 # 3 # $Id$ 4 # 5 # Copyright (C) 2005 Johan Enell 6 # Copyright (C) 2008 Jari Häkkinen 7 # 8 # This file is part of the se.lu.onk.MergeBioAssay plug-in for 9 # BASE. Available at http://baseplugins.thep.lu.se/ and BASE web site 10 # is http://base.thep.lu.se 11 # 12 # This is free software; you can redistribute it and/or modify it 13 # under the terms of the GNU General Public License as published by 14 # the Free Software Foundation; either version 3 of the License, or 15 # (at your option) any later version. 16 # 17 # The software is distributed in the hope that it will be useful, but 18 # WITHOUT ANY WARRANTY; without even the implied warranty of 19 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 20 # General Public License for more details. 21 # 22 # You should have received a copy of the GNU General Public License 23 # along with BASE. If not, see <http://www.gnu.org/licenses/>. 24 # 4 25 5 26 progdir="`dirname \"$0\"`" -
plugins/base1/se.lu.onk.ReplicateError/trunk/src/replicateerror/AcrossAssays/HTML.java
-
Property
svn:keywords
set to
Id
r149 r784 1 1 /* 2 * plugins 3 * Copyright (C) 2005 Johan Enell 4 * 5 * This program is free software; you can redistribute it and/or 6 * modify it under the terms of the GNU General Public License 7 * as published by the Free Software Foundation; either version 2 8 * of the License, or (at your option) any later version. 9 * 10 * This program is distributed in the hope that it will be useful, 11 * but WITHOUT ANY WARRANTY; without even the implied warranty of 12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 13 * GNU General Public License for more details. 14 * 15 * You should have received a copy of the GNU General Public License 16 * along with this program; if not, write to the Free Software 17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. 18 */ 2 $Id$ 3 4 Copyright (C) 2005 Johan Enell 5 6 This file is part of the se.lu.onk.ReplicateError plug-in for 7 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 8 site is http://base.thep.lu.se 9 10 This is free software; you can redistribute it and/or modify it 11 under the terms of the GNU General Public License as published by 12 the Free Software Foundation; either version 3 of the License, or 13 (at your option) any later version. 14 15 The software is distributed in the hope that it will be useful, but 16 WITHOUT ANY WARRANTY; without even the implied warranty of 17 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 18 General Public License for more details. 19 20 You should have received a copy of the GNU General Public License 21 along with BASE. If not, see <http://www.gnu.org/licenses/>. 22 */ 19 23 package replicateerror.AcrossAssays; 20 24 -
Property
svn:keywords
set to
-
plugins/base1/se.lu.onk.ReplicateError/trunk/src/replicateerror/AcrossAssays/ReplicateErrorAA.java
-
Property
svn:keywords
set to
Id
r149 r784 1 1 /* 2 * plugins 3 * Copyright (C) 2005 Johan Enell 4 * 5 * This program is free software; you can redistribute it and/or 6 * modify it under the terms of the GNU General Public License 7 * as published by the Free Software Foundation; either version 2 8 * of the License, or (at your option) any later version. 9 * 10 * This program is distributed in the hope that it will be useful, 11 * but WITHOUT ANY WARRANTY; without even the implied warranty of 12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 13 * GNU General Public License for more details. 14 * 15 * You should have received a copy of the GNU General Public License 16 * along with this program; if not, write to the Free Software 17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. 18 */ 2 $Id$ 3 4 Copyright (C) 2005 Johan Enell 5 6 This file is part of the se.lu.onk.ReplicateError plug-in for 7 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 8 site is http://base.thep.lu.se 9 10 This is free software; you can redistribute it and/or modify it 11 under the terms of the GNU General Public License as published by 12 the Free Software Foundation; either version 3 of the License, or 13 (at your option) any later version. 14 15 The software is distributed in the hope that it will be useful, but 16 WITHOUT ANY WARRANTY; without even the implied warranty of 17 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 18 General Public License for more details. 19 20 You should have received a copy of the GNU General Public License 21 along with BASE. If not, see <http://www.gnu.org/licenses/>. 22 */ 19 23 package replicateerror.AcrossAssays; 20 24 -
Property
svn:keywords
set to
-
plugins/base1/se.lu.onk.ReplicateError/trunk/src/replicateerror/R.java
-
Property
svn:keywords
set to
Id
r149 r784 1 1 /* 2 * plugins 3 * Copyright (C) 2005 Johan Enell 4 * 5 * This program is free software; you can redistribute it and/or 6 * modify it under the terms of the GNU General Public License 7 * as published by the Free Software Foundation; either version 2 8 * of the License, or (at your option) any later version. 9 * 10 * This program is distributed in the hope that it will be useful, 11 * but WITHOUT ANY WARRANTY; without even the implied warranty of 12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 13 * GNU General Public License for more details. 14 * 15 * You should have received a copy of the GNU General Public License 16 * along with this program; if not, write to the Free Software 17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. 18 */ 2 $Id$ 3 4 Copyright (C) 2005 Johan Enell 5 6 This file is part of the se.lu.onk.ReplicateError plug-in for 7 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 8 site is http://base.thep.lu.se 9 10 This is free software; you can redistribute it and/or modify it 11 under the terms of the GNU General Public License as published by 12 the Free Software Foundation; either version 3 of the License, or 13 (at your option) any later version. 14 15 The software is distributed in the hope that it will be useful, but 16 WITHOUT ANY WARRANTY; without even the implied warranty of 17 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 18 General Public License for more details. 19 20 You should have received a copy of the GNU General Public License 21 along with BASE. If not, see <http://www.gnu.org/licenses/>. 22 */ 19 23 package replicateerror; 20 24 -
Property
svn:keywords
set to
-
plugins/base1/se.lu.onk.ReplicateError/trunk/src/replicateerror/Replicate.java
-
Property
svn:keywords
set to
Id
r149 r784 1 1 /* 2 * plugins 3 * Copyright (C) 2005 Johan Enell 4 * 5 * This program is free software; you can redistribute it and/or 6 * modify it under the terms of the GNU General Public License 7 * as published by the Free Software Foundation; either version 2 8 * of the License, or (at your option) any later version. 9 * 10 * This program is distributed in the hope that it will be useful, 11 * but WITHOUT ANY WARRANTY; without even the implied warranty of 12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 13 * GNU General Public License for more details. 14 * 15 * You should have received a copy of the GNU General Public License 16 * along with this program; if not, write to the Free Software 17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. 18 */ 2 $Id$ 3 4 Copyright (C) 2005 Johan Enell 5 6 This file is part of the se.lu.onk.ReplicateError plug-in for 7 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 8 site is http://base.thep.lu.se 9 10 This is free software; you can redistribute it and/or modify it 11 under the terms of the GNU General Public License as published by 12 the Free Software Foundation; either version 3 of the License, or 13 (at your option) any later version. 14 15 The software is distributed in the hope that it will be useful, but 16 WITHOUT ANY WARRANTY; without even the implied warranty of 17 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 18 General Public License for more details. 19 20 You should have received a copy of the GNU General Public License 21 along with BASE. If not, see <http://www.gnu.org/licenses/>. 22 */ 19 23 package replicateerror; 20 24 -
Property
svn:keywords
set to
-
plugins/base1/se.lu.onk.ReplicateError/trunk/src/replicateerror/ReplicateError.java
-
Property
svn:keywords
set to
Id
r769 r784 1 1 /* 2 * plugins 3 * Copyright (C) 2005 Johan Enell 4 * 5 * This program is free software; you can redistribute it and/or 6 * modify it under the terms of the GNU General Public License 7 * as published by the Free Software Foundation; either version 2 8 * of the License, or (at your option) any later version. 9 * 10 * This program is distributed in the hope that it will be useful, 11 * but WITHOUT ANY WARRANTY; without even the implied warranty of 12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 13 * GNU General Public License for more details. 14 * 15 * You should have received a copy of the GNU General Public License 16 * along with this program; if not, write to the Free Software 17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. 18 */ 2 $Id$ 3 4 Copyright (C) 2005 Johan Enell 5 Copyright (C) 2008 Jari Häkkinen 6 7 This file is part of the se.lu.onk.ReplicateError plug-in for 8 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 9 site is http://base.thep.lu.se 10 11 This is free software; you can redistribute it and/or modify it 12 under the terms of the GNU General Public License as published by 13 the Free Software Foundation; either version 3 of the License, or 14 (at your option) any later version. 15 16 The software is distributed in the hope that it will be useful, but 17 WITHOUT ANY WARRANTY; without even the implied warranty of 18 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 19 General Public License for more details. 20 21 You should have received a copy of the GNU General Public License 22 along with BASE. If not, see <http://www.gnu.org/licenses/>. 23 */ 19 24 package replicateerror; 20 25 -
Property
svn:keywords
set to
-
plugins/base1/se.lu.onk.ReplicateError/trunk/src/replicateerror/Spot.java
-
Property
svn:keywords
set to
Id
r149 r784 1 1 /* 2 * plugins 3 * Copyright (C) 2006 Johan Enell 4 * 5 * This program is free software; you can redistribute it and/or 6 * modify it under the terms of the GNU General Public License 7 * as published by the Free Software Foundation; either version 2 8 * of the License, or (at your option) any later version. 9 * 10 * This program is distributed in the hope that it will be useful, 11 * but WITHOUT ANY WARRANTY; without even the implied warranty of 12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 13 * GNU General Public License for more details. 14 * 15 * You should have received a copy of the GNU General Public License 16 * along with this program; if not, write to the Free Software 17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. 18 */ 2 $Id$ 3 4 Copyright (C) 2005 Johan Enell 5 6 This file is part of the se.lu.onk.ReplicateError plug-in for 7 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 8 site is http://base.thep.lu.se 9 10 This is free software; you can redistribute it and/or modify it 11 under the terms of the GNU General Public License as published by 12 the Free Software Foundation; either version 3 of the License, or 13 (at your option) any later version. 14 15 The software is distributed in the hope that it will be useful, but 16 WITHOUT ANY WARRANTY; without even the implied warranty of 17 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 18 General Public License for more details. 19 20 You should have received a copy of the GNU General Public License 21 along with BASE. If not, see <http://www.gnu.org/licenses/>. 22 */ 19 23 package replicateerror; 20 24 -
Property
svn:keywords
set to
-
plugins/base1/se.lu.onk.ReplicateError/trunk/src/replicateerror/WithinAssays/ReplicateErrorWA.java
-
Property
svn:keywords
set to
Id
r149 r784 1 1 /* 2 * plugins 3 * Copyright (C) 2005 Johan Enell 4 * 5 * This program is free software; you can redistribute it and/or 6 * modify it under the terms of the GNU General Public License 7 * as published by the Free Software Foundation; either version 2 8 * of the License, or (at your option) any later version. 9 * 10 * This program is distributed in the hope that it will be useful, 11 * but WITHOUT ANY WARRANTY; without even the implied warranty of 12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 13 * GNU General Public License for more details. 14 * 15 * You should have received a copy of the GNU General Public License 16 * along with this program; if not, write to the Free Software 17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. 18 */ 2 $Id$ 3 4 Copyright (C) 2005 Johan Enell 5 6 This file is part of the se.lu.onk.ReplicateError plug-in for 7 BASE. Available at http://baseplugins.thep.lu.se/ and BASE web 8 site is http://base.thep.lu.se 9 10 This is free software; you can redistribute it and/or modify it 11 under the terms of the GNU General Public License as published by 12 the Free Software Foundation; either version 3 of the License, or 13 (at your option) any later version. 14 15 The software is distributed in the hope that it will be useful, but 16 WITHOUT ANY WARRANTY; without even the implied warranty of 17 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 18 General Public License for more details. 19 20 You should have received a copy of the GNU General Public License 21 along with BASE. If not, see <http://www.gnu.org/licenses/>. 22 */ 19 23 package replicateerror.WithinAssays; 20 24 -
Property
svn:keywords
set to
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