Changeset 796

Timestamp:

Oct 1, 2008, 3:09:23 PM (13 years ago)

Author:

Jari Häkkinen

Message:

References #129. Improved table footnote.

File:

• plugins/base1/se.lu.onk.ReplicateError/trunk/src/replicateerror/AcrossAssays/HTML.java (modified) (1 diff)

plugins/base1/se.lu.onk.ReplicateError/trunk/src/replicateerror/AcrossAssays/HTML.java

@@ -132 +132 @@
     table.println("</table>");
     table.println("<table width=500>");
-    table.print("<tr><td>SD is the standard deviation</td></tr>");
+    table.print("<tr><td>SD is the standard deviation of the log2ratio ");
+    table.println("difference between replicates.</td></tr>");
     table.print("<tr><td><strong>Note:</strong> Numbers presented ");
-    table.print("here differ from the number of spots shown in the bioassay ");
-    table.print("listings. The table show number of replicates, whereas bioassay ");
-    table.print("listings show total number of spots (sum{replicates times multiplicity} ");
-    table.println("optionally added with the number of singletons).</td></tr></table>");
+    table.print("here differ from the numbers shown in the bioassay listings. The table ");
+    table.print("above display number of replicates in each bioassay whereas <br> i) ");
+    table.print("bioassay set listings show total number of spots and reporters for ");
+    table.print("bioassay sets, and <br> ii) bioassay listings show the total number of ");
+    table.println("spots in each bioassay.</td></tr></table>");
     table.println("</body>");
     table.println("</html>");