Changeset 877
- Timestamp:
- Dec 5, 2008, 11:27:06 AM (14 years ago)
- File:
-
- 1 edited
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plugins/base1/se.lu.onk.MergeBioAssay/trunk/README
r876 r877 53 53 # Upload the configuration file `mergebioassay.base` 54 54 # Create/update a configuration for the plug-in where you select the 55 plug-in defin tion file `mergebioassay.base`. BASE will respond55 plug-in definition file `mergebioassay.base`. BASE will respond 56 56 that plug-ins where configured but ... 57 57 # Re-configure the plug-in without selecting a file, set the `Plugin … … 159 159 ''Assayname'':: 160 160 This parameter specifies how the name of the assays is 161 constructed. Use %0-%9 as wild cards and then put any character(s)161 constructed. Use %0-%9 as wild-cards and then put any character(s) 162 162 between as delimiters. For example assay name Assay_1_A can be 163 163 divided into three parts. By setting the parameter to %1_%2_%3 the 164 plug in will read assay name assay_1_A and set %1=Assay, %2=1 and164 plug-in will read assay name assay_1_A and set %1=Assay, %2=1 and 165 165 %3=A. Thus, if your assays have names constructed in the same way 166 166 merge can sort the assays in groups depending on %1, %2 or %3. … … 191 191 192 192 ''Merge method'':: 193 Choose one of the method es described above.193 Choose one of the methods described above. 194 194 195 195 ''Ratio'':: … … 199 199 parameter you can choose a %-number followed by the two values it 200 200 can take. The last character in the string must be the delimiter the 201 user has cho osen otuse. The other way a user can specify the ratio201 user has chosen to use. The other way a user can specify the ratio 202 202 is by choosing an annotation type in the list and specify the values 203 203 in the annotation values parameter. This is done by writing the
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