Changeset 910
- Timestamp:
- Dec 9, 2008, 1:01:38 PM (14 years ago)
- Location:
- plugins/base2/net.sf.basedb.normalizers/trunk
- Files:
-
- 1 deleted
- 13 edited
- 1 copied
Legend:
- Unmodified
- Added
- Removed
-
plugins/base2/net.sf.basedb.normalizers/trunk/INSTALL
r909 r910 12 12 This is free software; you can redistribute it and/or 13 13 modify it under the terms of the GNU General Public License 14 as published by the Free Software Foundation; either version 214 as published by the Free Software Foundation; either version 3 15 15 of the License, or (at your option) any later version. 16 16 … … 21 21 22 22 You should have received a copy of the GNU General Public License 23 along with this program; if not, write to the Free Software 24 Foundation, Inc., 59 Temple Place - Suite 330, 25 Boston, MA 02111-1307, USA. 23 along with this program. If not, see <http://www.gnu.org/licenses/>. 26 24 }}} 27 25 ---------------------------------------------------------------------- -
plugins/base2/net.sf.basedb.normalizers/trunk/META-INF/base-plugins.xml
r749 r910 1 1 <?xml version="1.0" encoding="UTF-8"?> 2 2 <!-- 3 3 $Id$ 4 4 5 Copyright (C) 2008 Martin Svensson 6 7 This file is part of Normalizers plug-in package for BASE. 8 Available at http://baseplugins.thep.lu.se/ 9 BASE main site: http://base.thep.lu.se/ 10 11 This is free software; you can redistribute it and/or 12 modify it under the terms of the GNU General Public License 13 as published by the Free Software Foundation; either version 2 14 of the License, or (at your option) any later version. 15 16 The software is distributed in the hope that it will be useful, 17 but WITHOUT ANY WARRANTY; without even the implied warranty of 18 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 19 GNU General Public License for more details. 20 21 You should have received a copy of the GNU General Public License 22 along with this program; if not, write to the Free Software 23 Foundation, Inc., 59 Temple Place - Suite 330, 24 Boston, MA 02111-1307, USA. 5 Copyright (C) 2008 Martin Svensson 6 7 This file is part of the Normalizers plug-in package for BASE 8 (net.sf.based.normalizers). The package is available at 9 http://baseplugins.thep.lu.se/ BASE main site is 10 http://base.thep.lu.se/ 11 12 This is free software; you can redistribute it and/or modify it 13 under the terms of the GNU General Public License as published by 14 the Free Software Foundation; either version 3 of the License, or 15 (at your option) any later version. 16 17 The software is distributed in the hope that it will be useful, 18 but WITHOUT ANY WARRANTY; without even the implied warranty of 19 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 20 General Public License for more details. 21 22 You should have received a copy of the GNU General Public License 23 along with this program. If not, see <http://www.gnu.org/licenses/>. 25 24 --> 26 25 <!DOCTYPE plugins SYSTEM "base-plugins.dtd" > 27 <!-- $Id -->28 26 <plugins jarname="%%plugins.jar%%"> 29 27 <pluginclass classname="net.sf.basedb.plugins.AverageNormalization"> -
plugins/base2/net.sf.basedb.normalizers/trunk/README
r909 r910 74 74 This is free software; you can redistribute it and/or 75 75 modify it under the terms of the GNU General Public License 76 as published by the Free Software Foundation; either version 276 as published by the Free Software Foundation; either version 3 77 77 of the License, or (at your option) any later version. 78 78 … … 83 83 84 84 You should have received a copy of the GNU General Public License 85 along with this program; if not, write to the Free Software 86 Foundation, Inc., 59 Temple Place - Suite 330, 87 Boston, MA 02111-1307, USA. 85 along with this program. If not, see <http://www.gnu.org/licenses/>. 88 86 }}} -
plugins/base2/net.sf.basedb.normalizers/trunk/build.xml
r747 r910 1 1 <?xml version="1.0" encoding="UTF-8"?> 2 2 <!-- 3 3 $Id$ 4 4 5 Copyright (C) 2008 Martin Svensson 6 7 This file is part of Normalizers plug-in package for BASE. 8 Available at http://baseplugins.thep.lu.se/ 9 BASE main site: http://base.thep.lu.se/ 10 11 This is free software; you can redistribute it and/or 12 modify it under the terms of the GNU General Public License 13 as published by the Free Software Foundation; either version 2 14 of the License, or (at your option) any later version. 15 16 The software is distributed in the hope that it will be useful, 17 but WITHOUT ANY WARRANTY; without even the implied warranty of 18 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 19 GNU General Public License for more details. 20 21 You should have received a copy of the GNU General Public License 22 along with this program; if not, write to the Free Software 23 Foundation, Inc., 59 Temple Place - Suite 330, 24 Boston, MA 02111-1307, USA. 5 Copyright (C) 2008 Martin Svensson 6 7 This file is part of the Normalizers plug-in package for BASE 8 (net.sf.based.normalizers). The package is available at 9 http://baseplugins.thep.lu.se/ BASE main site is 10 http://base.thep.lu.se/ 11 12 This is free software; you can redistribute it and/or modify it 13 under the terms of the GNU General Public License as published by 14 the Free Software Foundation; either version 3 of the License, or 15 (at your option) any later version. 16 17 The software is distributed in the hope that it will be useful, 18 but WITHOUT ANY WARRANTY; without even the implied warranty of 19 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 20 General Public License for more details. 21 22 You should have received a copy of the GNU General Public License 23 along with this program. If not, see <http://www.gnu.org/licenses/>. 25 24 --> 26 25 … … 133 132 </target> 134 133 135 </project> 134 </project> -
plugins/base2/net.sf.basedb.normalizers/trunk/src/net/sf/basedb/normalizers/Normalizations.java
r746 r910 2 2 $Id:Normalizations.java 744 2008-08-26 07:54:01Z martin $ 3 3 4 Copyright (C) 2008 4 Copyright (C) 2008 Martin Svensson 5 5 6 This file is part of Normalizers package for BASE. 7 Available at http://baseplugins.thep.lu.se/ 8 BASE main site: http://base.thep.lu.se/ 6 This file is part of the Normalizers plug-in package for BASE 7 (net.sf.based.normalizers). The package is available at 8 http://baseplugins.thep.lu.se/ BASE main site is 9 http://base.thep.lu.se/ 9 10 10 11 This is free software; you can redistribute it and/or 11 12 modify it under the terms of the GNU General Public License 12 as published by the Free Software Foundation; either version 213 as published by the Free Software Foundation; either version 3 13 14 of the License, or (at your option) any later version. 14 15 … … 19 20 20 21 You should have received a copy of the GNU General Public License 21 along with this program; if not, write to the Free Software 22 Foundation, Inc., 59 Temple Place - Suite 330, 23 Boston, MA 02111-1307, USA. 22 along with this program. If not, see <http://www.gnu.org/licenses/>. 24 23 */ 25 24 -
plugins/base2/net.sf.basedb.normalizers/trunk/src/net/sf/basedb/plugins/AbstractNormalizationPlugin.java
r753 r910 2 2 $Id$ 3 3 4 Copyright (C) 2008 4 Copyright (C) 2008 Martin Svensson 5 5 6 This file is part of Normalizers package for BASE. 7 Available at http://baseplugins.thep.lu.se/ 8 BASE main site: http://base.thep.lu.se/ 6 This file is part of the Normalizers plug-in package for BASE 7 (net.sf.based.normalizers). The package is available at 8 http://baseplugins.thep.lu.se/ BASE main site is 9 http://base.thep.lu.se/ 9 10 10 11 This is free software; you can redistribute it and/or 11 12 modify it under the terms of the GNU General Public License 12 as published by the Free Software Foundation; either version 213 as published by the Free Software Foundation; either version 3 13 14 of the License, or (at your option) any later version. 14 15 … … 19 20 20 21 You should have received a copy of the GNU General Public License 21 along with this program; if not, write to the Free Software 22 Foundation, Inc., 59 Temple Place - Suite 330, 23 Boston, MA 02111-1307, USA. 22 along with this program. If not, see <http://www.gnu.org/licenses/>. 24 23 */ 25 24 -
plugins/base2/net.sf.basedb.normalizers/trunk/src/net/sf/basedb/plugins/AbstractSpotData.java
r753 r910 2 2 $Id$ 3 3 4 Copyright (C) 2008 4 Copyright (C) 2008 Martin Svensson 5 5 6 This file is part of Normalizers package for BASE. 7 Available at http://baseplugins.thep.lu.se/ 8 BASE main site: http://base.thep.lu.se/ 6 This file is part of the Normalizers plug-in package for BASE 7 (net.sf.based.normalizers). The package is available at 8 http://baseplugins.thep.lu.se/ BASE main site is 9 http://base.thep.lu.se/ 9 10 10 11 This is free software; you can redistribute it and/or 11 12 modify it under the terms of the GNU General Public License 12 as published by the Free Software Foundation; either version 213 as published by the Free Software Foundation; either version 3 13 14 of the License, or (at your option) any later version. 14 15 … … 19 20 20 21 You should have received a copy of the GNU General Public License 21 along with this program; if not, write to the Free Software 22 Foundation, Inc., 59 Temple Place - Suite 330, 23 Boston, MA 02111-1307, USA. 22 along with this program. If not, see <http://www.gnu.org/licenses/>. 24 23 */ 25 24 package net.sf.basedb.plugins; -
plugins/base2/net.sf.basedb.normalizers/trunk/src/net/sf/basedb/plugins/AverageNormalization.java
r909 r910 2 2 $Id$ 3 3 4 Copyright (C) 2008 5 6 This file is part of Normalizers package for BASE. 7 Available at http://baseplugins.thep.lu.se/ 8 BASE main site: http://base.thep.lu.se/ 4 Copyright (C) 2008 Martin Svensson 5 6 This file is part of the Normalizers plug-in package for BASE 7 (net.sf.based.normalizers). The package is available at 8 http://baseplugins.thep.lu.se/ BASE main site is 9 http://base.thep.lu.se/ 9 10 10 11 This is free software; you can redistribute it and/or 11 12 modify it under the terms of the GNU General Public License 12 as published by the Free Software Foundation; either version 213 as published by the Free Software Foundation; either version 3 13 14 of the License, or (at your option) any later version. 14 15 … … 19 20 20 21 You should have received a copy of the GNU General Public License 21 along with this program; if not, write to the Free Software 22 Foundation, Inc., 59 Temple Place - Suite 330, 23 Boston, MA 02111-1307, USA. 22 along with this program. If not, see <http://www.gnu.org/licenses/>. 24 23 */ 25 24 -
plugins/base2/net.sf.basedb.normalizers/trunk/src/net/sf/basedb/plugins/CubicSplineNormalization.java
r746 r910 2 2 $Id$ 3 3 4 Copyright (C) 2008 5 6 This file is part of Normalizers package for BASE. 7 Available at http://baseplugins.thep.lu.se/ 8 BASE main site: http://base.thep.lu.se/ 4 Copyright (C) 2008 Martin Svensson 5 6 This file is part of the Normalizers plug-in package for BASE 7 (net.sf.based.normalizers). The package is available at 8 http://baseplugins.thep.lu.se/ BASE main site is 9 http://base.thep.lu.se/ 9 10 10 11 This is free software; you can redistribute it and/or 11 12 modify it under the terms of the GNU General Public License 12 as published by the Free Software Foundation; either version 213 as published by the Free Software Foundation; either version 3 13 14 of the License, or (at your option) any later version. 14 15 … … 19 20 20 21 You should have received a copy of the GNU General Public License 21 along with this program; if not, write to the Free Software 22 Foundation, Inc., 59 Temple Place - Suite 330, 23 Boston, MA 02111-1307, USA. 22 along with this program. If not, see <http://www.gnu.org/licenses/>. 24 23 */ 25 24 -
plugins/base2/net.sf.basedb.normalizers/trunk/src/net/sf/basedb/plugins/Normalizable.java
r753 r910 4 4 Copyright (C) 2008 Martin Svensson 5 5 6 This file is part of Normalizers package for BASE. 7 Available at http://baseplugins.thep.lu.se/ 8 BASE main site: http://base.thep.lu.se/ 6 This file is part of the Normalizers plug-in package for BASE 7 (net.sf.based.normalizers). The package is available at 8 http://baseplugins.thep.lu.se/ BASE main site is 9 http://base.thep.lu.se/ 9 10 10 11 This is free software; you can redistribute it and/or 11 12 modify it under the terms of the GNU General Public License 12 as published by the Free Software Foundation; either version 213 as published by the Free Software Foundation; either version 3 13 14 of the License, or (at your option) any later version. 14 15 … … 19 20 20 21 You should have received a copy of the GNU General Public License 21 along with this program; if not, write to the Free Software 22 Foundation, Inc., 59 Temple Place - Suite 330, 23 Boston, MA 02111-1307, USA. 22 along with this program. If not, see <http://www.gnu.org/licenses/>. 24 23 */ 25 24 package net.sf.basedb.plugins; -
plugins/base2/net.sf.basedb.normalizers/trunk/src/net/sf/basedb/plugins/RankInvariantNormalization.java
r909 r910 4 4 Copyright (C) 2008 Martin Svensson 5 5 6 This file is part of Normalizers package for BASE. 7 Available at http://baseplugins.thep.lu.se/ 8 BASE main site: http://base.thep.lu.se/ 6 This file is part of the Normalizers plug-in package for BASE 7 (net.sf.based.normalizers). The package is available at 8 http://baseplugins.thep.lu.se/ BASE main site is 9 http://base.thep.lu.se/ 9 10 10 11 This is free software; you can redistribute it and/or 11 12 modify it under the terms of the GNU General Public License 12 as published by the Free Software Foundation; either version 213 as published by the Free Software Foundation; either version 3 13 14 of the License, or (at your option) any later version. 14 15 … … 19 20 20 21 You should have received a copy of the GNU General Public License 21 along with this program; if not, write to the Free Software 22 Foundation, Inc., 59 Temple Place - Suite 330, 23 Boston, MA 02111-1307, USA. 22 along with this program. If not, see <http://www.gnu.org/licenses/>. 24 23 */ 25 24 package net.sf.basedb.plugins; -
plugins/base2/net.sf.basedb.normalizers/trunk/src/net/sf/basedb/plugins/SpotData1Ch.java
r755 r910 4 4 Copyright (C) 2008 Martin Svensson 5 5 6 This file is part of Normalizers package for BASE. 7 Available at http://baseplugins.thep.lu.se/ 8 BASE main site: http://base.thep.lu.se/ 6 This file is part of the Normalizers plug-in package for BASE 7 (net.sf.based.normalizers). The package is available at 8 http://baseplugins.thep.lu.se/ BASE main site is 9 http://base.thep.lu.se/ 9 10 10 11 This is free software; you can redistribute it and/or 11 12 modify it under the terms of the GNU General Public License 12 as published by the Free Software Foundation; either version 213 as published by the Free Software Foundation; either version 3 13 14 of the License, or (at your option) any later version. 14 15 … … 19 20 20 21 You should have received a copy of the GNU General Public License 21 along with this program; if not, write to the Free Software 22 Foundation, Inc., 59 Temple Place - Suite 330, 23 Boston, MA 02111-1307, USA. 22 along with this program. If not, see <http://www.gnu.org/licenses/>. 24 23 */ 25 24 -
plugins/base2/net.sf.basedb.normalizers/trunk/src/net/sf/basedb/plugins/SpotData2Ch.java
r755 r910 4 4 Copyright (C) 2008 Martin Svensson 5 5 6 This file is part of Normalizers package for BASE. 7 Available at http://baseplugins.thep.lu.se/ 8 BASE main site: http://base.thep.lu.se/ 6 This file is part of the Normalizers plug-in package for BASE 7 (net.sf.based.normalizers). The package is available at 8 http://baseplugins.thep.lu.se/ BASE main site is 9 http://base.thep.lu.se/ 9 10 10 11 This is free software; you can redistribute it and/or 11 12 modify it under the terms of the GNU General Public License 12 as published by the Free Software Foundation; either version 213 as published by the Free Software Foundation; either version 3 13 14 of the License, or (at your option) any later version. 14 15 … … 19 20 20 21 You should have received a copy of the GNU General Public License 21 along with this program; if not, write to the Free Software 22 Foundation, Inc., 59 Temple Place - Suite 330, 23 Boston, MA 02111-1307, USA. 22 along with this program. If not, see <http://www.gnu.org/licenses/>. 24 23 */ 25 24
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