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Diff Rev Age Author Log Message
(edit) @307   16 years Jari Häkkinen Tagging se.lu.thep.affymetrix release 0.6
(edit) @306   16 years Jari Häkkinen Setting up tagging hierarchy.
(edit) @305   16 years Jari Häkkinen Added fixed items to list.
(edit) @304   16 years Jari Häkkinen Bumped version number.
(edit) @303   16 years Jari Häkkinen Improved speed.
(edit) @302   16 years Peter Johansson changed to log2 base
(edit) @301   16 years Jari Häkkinen Added clarification on result scale.
(edit) @300   16 years Peter Johansson Result from plier is now logarithmized prior imported to BASE
(edit) @299   16 years Jari Häkkinen Wiki page changed.
(edit) @298   16 years Jari Häkkinen Fixing broken sed substitution.
(edit) @297   16 years Jari Häkkinen Fixing copyright year.
(edit) @296   16 years Peter Johansson removing debug ''
(edit) @295   16 years Jari Häkkinen Added Plier class name to instructions.
(edit) @294   16 years Peter Johansson typo
(edit) @293   16 years Peter Johansson improved text on PLIER
(edit) @292   16 years Jari Häkkinen Fixing precompiled dependency.
(edit) @291   16 years Jari Häkkinen Fixes #21.
(edit) @290   16 years Jari Häkkinen Got rid of deprecation warning.
(edit) @289   16 years Peter Johansson improved dependencies
(edit) @288   16 years Peter Johansson typo
(edit) @287   16 years Jari Häkkinen Removed explicit version number.
(edit) @286   16 years Jari Häkkinen Fixes #42.
(edit) @285   16 years Jari Häkkinen Addresses #42.
(edit) @284   16 years Jari Häkkinen Spell checked.
(edit) @283   16 years Jari Häkkinen Removed stray \!
(edit) @282   16 years Jari Häkkinen Improved text.
(edit) @281   16 years Jari Häkkinen Updated confusing numbering.
(edit) @280   16 years Jari Häkkinen Removed my email address. Updated RMAExpress information to release …
(edit) @279   16 years Jari Häkkinen Removed my email address, and updated link to new demo server location.
(edit) @278   16 years Peter Johansson fixing a few typos
(edit) @277   16 years Peter Johansson some lippstick refs #45
(edit) @276   16 years Peter Johansson updated README for affy package refs #45
(edit) @275   16 years Peter Johansson adding property mime-type text/x-trac-wiki
(edit) @274   16 years Peter Johansson some more lippstick refs #45
(edit) @273   16 years Peter Johansson some more installation instructions for affymetrix package refs #45
(edit) @272   16 years Peter Johansson intermediate commit of new installation instructions for affymetrix …
(edit) @271   16 years Peter Johansson Fixing the import into BASE of the results generated by PLIER. Refs …
(edit) @270   16 years Johan Enell corrected an error message
(edit) @269   16 years Johan Enell made findFieldIntList a little bir more stable
(edit) @268   16 years Peter Johansson removed deprecated options in svndigest config file. Also sorted …
(edit) @267   16 years Jari Häkkinen Added config file for svndigest.
(edit) @266   16 years Peter Johansson initial check-in of PLIER refs #45
(edit) @265   16 years Johan Enell the sections sets default value at construction
(edit) @264   16 years Johan Enell made the exception msg a little better
(edit) @263   16 years Johan Enell Added methods to get sections of a specific type
(edit) @262   16 years Johan Enell Fixed a nullpointer
(edit) @261   16 years Jari Häkkinen Changed samples and code to refer to the demo server.
(edit) @260   16 years Jari Häkkinen Fixed svn properties, 2nd try.
(edit) @259   16 years Jari Häkkinen Fixed svn properties. Added $ string.
(edit) @258   16 years Jari Häkkinen Changed default server to the demo server, default user to base2.
(edit) @257   16 years mattias Initial import of webservice modules in Perl and R
(edit) @256   16 years Jari Häkkinen Adding directory for web services clients from thep.
(edit) @255   16 years Johan Enell made some changes in the printing methods
(edit) @254   16 years Johan Enell prints the spot data
(edit) @253   16 years Johan Enell BASEFile prints spot data
(edit) @252   16 years Johan Enell Calculates RankProduct? and creates output
(edit) @251   16 years Johan Enell changed getCount
(edit) @250   16 years Johan Enell there were some buggs …
(edit) @249   16 years Johan Enell removed some warnings
(edit) @248   16 years Johan Enell major changes to basefile some methods are deprecated and will be removed
(edit) @247   16 years Johan Enell Added BASEFileAssaySection
(edit) @246   16 years Johan Enell RankProduct? calculates the rp correct
(edit) @245   16 years Johan Enell added a new method in BASEFileException and caught an exception in the …
(edit) @244   16 years Johan Enell RankProduct? now working
(edit) @243   16 years Johan Enell renamed plot
(edit) @242   16 years Johan Enell plot classes added
(edit) @241   16 years Johan Enell added ztest to onclass package
(edit) @240   16 years Johan Enell OneClass? added with ztest
(edit) @239   16 years mbayer several bug fixes: - change handling of dirs and files so that file is …
(edit) @238   16 years mbayer updated
(edit) @237   16 years mbayer Removed file/folder
(edit) @236   16 years mbayer first added
(edit) @235   16 years mbayer updated
(edit) @234   16 years mbayer error handling improved
(edit) @233   16 years mbayer updated -- see code changes in revision 236
(edit) @232   16 years mbayer updated to reflect the changes prior to release (Affy support, …
(edit) @231   16 years mbayer fixed a number of issues: - implemented support for Affy files - have …
(edit) @230   16 years mbayer minor changes to comments
(edit) @229   16 years mbayer removed hard coding of id of RawDataImporter? plugin
(edit) @228   16 years Jari Häkkinen Fixes #44.
(edit) @227   16 years Johan Enell Fixes #37 Added boxplot
(edit) @226   16 years mbayer initial import
(edit) @225   16 years mbayer Removed file/folder
(edit) @224   16 years mbayer Removed file/folder
(edit) @223   16 years mbayer initial import
(edit) @222   16 years Johan Enell References #37
(edit) @221   16 years Johan Enell Fixes #40
(edit) @220   16 years Johan Enell Cleaned up the code
(edit) @219   16 years Johan Enell Fixes #32 The normsdist function works if used in the correct way. The …
(edit) @218   16 years Jari Häkkinen Creating directories for new developers.
(edit) @217   16 years Johan Enell References #32. Needs a normsdist function and the HistogramDataset? …
(edit) @216   16 years Johan Enell moved plotfunctions to their own class
(edit) @215   16 years Johan Enell corrected the classpath
(edit) @214   16 years Johan Enell Fixes #29 #30
(edit) @213   16 years Johan Enell Fixes #28
(edit) @212   16 years Johan Enell Case sensitivity added again. Apparently it was needed…
(edit) @211   16 years Johan Enell made the filter case insensitive
(edit) @210   16 years Johan Enell Fixes #38
(edit) @209   16 years Johan Enell added ignore property, not using newline as separator
(edit) @208   16 years Johan Enell JFreeChart added
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