|
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@636
|
16 years |
Nicklas Nordborg |
References #103: Create example extensions
First checkin of example …
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|
|
@635
|
16 years |
Nicklas Nordborg |
Added directory structure for extension examples
|
|
|
@634
|
16 years |
Nicklas Nordborg |
Added release procedure instructions.
|
|
|
@633
|
16 years |
Nicklas Nordborg |
Changes for future release 1.1
|
|
|
@632
|
16 years |
Nicklas Nordborg |
Tagging release 1.0
|
|
|
@631
|
16 years |
Nicklas Nordborg |
References #91: Import Illumina Bead Summary(IBS) files as raw data
…
|
|
|
@630
|
16 years |
Nicklas Nordborg |
References #94: Import reporter annotations from bgx files
Added …
|
|
|
@629
|
16 years |
Nicklas Nordborg |
References #89: Installation program and documentation
Preparing for …
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|
|
@628
|
16 years |
Nicklas Nordborg |
References #89: Installation program and documentation
Made the SNP …
|
|
|
@627
|
16 years |
Nicklas Nordborg |
References #89: Installation program and documentation
Added readme …
|
|
|
@626
|
16 years |
Nicklas Nordborg |
References #89, #100: Added formulas for better SNP gui. Gtype = …
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|
|
@625
|
16 years |
Nicklas Nordborg |
References #102: Intensity calculator for Illumina SNP data
Added …
|
|
|
@624
|
16 years |
Nicklas Nordborg |
References #102: Intensity calculator for Illumina SNP data
The main …
|
|
|
@623
|
16 years |
Martin Svensson |
Fixes #100. Add Illumina SNP platform to the installation program
|
|
|
@622
|
16 years |
Martin Svensson |
References #101comment:9 - fixes the listed items in the comment.
|
|
|
@621
|
16 years |
Nicklas Nordborg |
Removed unused imports
|
|
|
@620
|
16 years |
Martin Svensson |
Fixes #93 Added some more javadoc and improved the code format in a …
|
|
|
@619
|
16 years |
Martin Svensson |
Fixes #101. The plug-in tested both from raw bioassay-listview and …
|
|
|
@618
|
16 years |
Martin Svensson |
References #101. The import is now done. Code needs to be cleaned up …
|
|
|
@617
|
16 years |
Martin Svensson |
References #101. Creating RawBioAssays? and split up files. The data …
|
|
|
@616
|
16 years |
Nicklas Nordborg |
Deleting old locations (again)
|
|
|
@615
|
16 years |
Nicklas Nordborg |
Deleting old branches (fourth try)
|
|
|
@614
|
16 years |
(none) |
|
|
|
@613
|
16 years |
(none) |
Deleting old branches (second try)
|
|
|
@612
|
16 years |
(none) |
Deleting old locations
|
|
|
@611
|
16 years |
Nicklas Nordborg |
Moving tab2mageimporter branch to the new location
|
|
|
@610
|
16 years |
Nicklas Nordborg |
Moving affymetrix 0.7 tag to new location
|
|
|
@609
|
16 years |
Nicklas Nordborg |
Moving affymetrix 0.6 tag to new location
|
|
|
@608
|
16 years |
Nicklas Nordborg |
Moving perl/R webservices example project to new location
|
|
|
@607
|
16 years |
Nicklas Nordborg |
Moving batchimporter project to new location
|
|
|
@606
|
16 years |
Nicklas Nordborg |
Moving tab2mage project to new location
|
|
|
@605
|
16 years |
Nicklas Nordborg |
Moving se.lu.thep.wenni project to new location
|
|
|
@604
|
16 years |
Nicklas Nordborg |
Moving se.lu.thep.affymetrix project to new location
|
|
|
@603
|
16 years |
Nicklas Nordborg |
Moving se.lu.onk project to new location
|
|
|
@602
|
16 years |
Nicklas Nordborg |
Removed trunk folders that prevents moving the projects
|
|
|
@601
|
16 years |
Nicklas Nordborg |
Moving Illumina project to new location (second try)
|
|
|
@600
|
16 years |
Nicklas Nordborg |
Copied to incorrect directory
|
|
|
@599
|
16 years |
Nicklas Nordborg |
Moving Illumina project to new location
|
|
|
@598
|
16 years |
Nicklas Nordborg |
Preparing new directory structure
|
|
|
@597
|
16 years |
Jari Häkkinen |
Improved memory usage of NNIFileConverter.
|
|
|
@596
|
16 years |
Jari Häkkinen |
Removing obsolete member function declarations.
|
|
|
@595
|
16 years |
Jari Häkkinen |
test should be the last directory visited for 'make'
|
|
|
@594
|
16 years |
Jari Häkkinen |
Improved memory usage of BaseFileConverter?. Previous implementation …
|
|
|
@593
|
16 years |
Jari Häkkinen |
Clarified that absolute path needed fof configure.
|
|
|
@592
|
16 years |
Martin Svensson |
References #101. Started on the plugin. A commit for the weekend.
|
|
|
@591
|
16 years |
Martin Svensson |
References #93 Correct some comments and removed debug-code
|
|
|
@590
|
16 years |
Martin Svensson |
References #93 You can now validate and extract meta-data from …
|
|
|
@589
|
16 years |
Martin Svensson |
References #100 Installation is now including SNP platform-variant and …
|
|
|
@588
|
16 years |
Nicklas Nordborg |
Fixes #91: Import Illumina Bead Summary(IBS) files as raw data
|
|
|
@587
|
16 years |
Martin Svensson |
References #89 Correct the name of the plug-in
|
|
|
@586
|
16 years |
Nicklas Nordborg |
References #94: Import reporter annotations from bgx files
Added …
|
|
|
@585
|
16 years |
Nicklas Nordborg |
References #89: Installation program and documentation
Updated …
|
|
|
@584
|
16 years |
Nicklas Nordborg |
Fixes #98: Implement validator and metadata extractor plug-in for BGX files
|
|
|
@583
|
16 years |
Nicklas Nordborg |
References #89: Installation program and documentation
Minor changes …
|
|
|
@582
|
16 years |
Nicklas Nordborg |
Removed unused imports
|
|
|
@581
|
16 years |
Nicklas Nordborg |
References #90: Create array design from a bgx-file
Fixed missing …
|
|
|
@580
|
16 years |
Nicklas Nordborg |
References #89: Installation program and documentation
Added 'Getting …
|
|
|
@579
|
16 years |
Martin Svensson |
Fixes #98 Implement validator and metadata extractor plug-in for BGX files
|
|
|
@578
|
16 years |
Martin Svensson |
Fixes #90 Create array design from a bgx-file.
|
|
|
@577
|
16 years |
Martin Svensson |
References #89 Installation plug-in is now able to create Illumina …
|
|
|
@576
|
16 years |
Martin Svensson |
References #89 Changed to wiki format and configured some svn properties
|
|
|
@575
|
16 years |
Martin Svensson |
Reference #94 Added more extended properties for Illumina reporters …
|
|
|
@574
|
16 years |
Jari Häkkinen |
Added information on how to resolve missing probe set situations.
|
|
|
@573
|
16 years |
Martin Svensson |
References #89 Added extended properties to be used with Illumina in BASE.
|
|
|
@572
|
16 years |
Martin Svensson |
References #89 Change names, ids and variables according to …
|
|
|
@571
|
16 years |
Martin Svensson |
References #89 Updated svn-properties for README file
|
|
|
@570
|
16 years |
Martin Svensson |
References #89 Inserted the readme-text in wiki format.
|
|
|
@569
|
16 years |
Martin Svensson |
References #98 The validator and meta data reader is done. The …
|
|
|
@568
|
16 years |
Nicklas Nordborg |
References #91: Import Illumina scandata files as raw data
Call …
|
|
|
@567
|
16 years |
Martin Svensson |
References #98 A start of a BGX validator/metadatareader.
|
|
|
@566
|
16 years |
Nicklas Nordborg |
References #89: Installation program and documentation
Added rest of …
|
|
|
@565
|
16 years |
Martin Svensson |
References #90 Added a default plugin configuration to come along with …
|
|
|
@564
|
16 years |
Nicklas Nordborg |
References #91: Import Illumina scandata files as raw data
Error …
|
|
|
@563
|
16 years |
Martin Svensson |
References #90 Refine comments and removed some blank lines.
|
|
|
@562
|
16 years |
Nicklas Nordborg |
References #91: Import Illumina scandata files as raw data
The …
|
|
|
@561
|
16 years |
Martin Svensson |
References #90 The plug-in can now be used to import features to an …
|
|
|
@560
|
16 years |
Nicklas Nordborg |
References #91: Import Illumina scandata files as raw data
A skeleton …
|
|
|
@559
|
16 years |
Nicklas Nordborg |
References #94: Import reporter annotations from bgx files
The …
|
|
|
@558
|
16 years |
mbayer |
have fixed several bugs after testing whole imports, notably a problem …
|
|
|
@557
|
16 years |
Nicklas Nordborg |
References #89: Installation program and documentation
Documented the …
|
|
|
@556
|
16 years |
Nicklas Nordborg |
References #94: Import reporter annotations from bgx files
First …
|
|
|
@555
|
16 years |
Martin Svensson |
References #89 Added more property checks when an item already exists …
|
|
|
@554
|
16 years |
Martin Svensson |
References #89 Illumina items are now created by the installation …
|
|
|
@553
|
16 years |
Nicklas Nordborg |
References #89: Installation program and documentation
Added INSTALL file
|
|
|
@552
|
16 years |
mbayer |
have added input validation (mandatory fields check)
added back …
|
|
|
@551
|
16 years |
Martin Svensson |
References #89 Start to insert illumina items with the installation plug-in
|
|
|
@550
|
16 years |
mbayer |
have restructured the code completely that writes the hybs section
|
|
|
@549
|
16 years |
Nicklas Nordborg |
References #89: Installation program and documentation
Updated …
|
|
|
@548
|
16 years |
mbayer |
new page added to gather additional info needed for autogeneration of …
|
|
|
@547
|
16 years |
mbayer |
number of issues fixed in UI
|
|
|
@546
|
16 years |
Nicklas Nordborg |
Initial project structure is now in place.
|
|
|
@545
|
16 years |
mbayer |
fixed bug in the submission of experiments that provide their own …
|
|
|
@544
|
16 years |
mbayer |
submission with existing tab2mage file implemented
|
|
|
@543
|
16 years |
mbayer |
submit mechanism has been changed to interactive -- submit.jsp now …
|
|
|
@542
|
16 years |
Nicklas Nordborg |
Adding root folder for example code (plug-ins and webservices client)
|
|
|
@541
|
16 years |
Nicklas Nordborg |
Adding root folder for the Illumina plug-ins project
|
|
|
@540
|
16 years |
mbayer |
changed code so that users can either run the wizard or import data …
|
|
|
@539
|
16 years |
mbayer |
forgot to add new files -- now added
|
|
|
@538
|
16 years |
gregory |
|
|
|
@537
|
16 years |
gregory |
|
|
|