source: extensions

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Diff Rev Age Author Log Message
(edit) @7022   8 weeks Nicklas Nordborg References #1453: Make the release exporter multi-threaded Use 1/3 of …
(edit) @7021   2 months Nicklas Nordborg References #1399: The Release importer should handle null values for …
(edit) @7020   2 months Nicklas Nordborg References #1451: Release exporter changes due to Methylation data …
(edit) @7019   2 months Nicklas Nordborg References #1451: Release exporter changes due to Methylation data …
(edit) @7018   2 months Nicklas Nordborg References #1393: Release exporter changes due to Oncoarray data …
(edit) @7017   2 months Nicklas Nordborg References #1393: Release exporter changes due to Oncoarray data …
(edit) @7016   2 months Nicklas Nordborg References #1393: Release exporter changes due to Oncoarray data The …
(edit) @7015   2 months Nicklas Nordborg References #1452: Release importer changes due to new subtypes from …
(edit) @7014   2 months Nicklas Nordborg References #1393: Release exporter changes due to Oncoarray data …
(edit) @7013   2 months Nicklas Nordborg
(edit) @7012   2 months Nicklas Nordborg References #1399: The Release importer should handle null values for …
(edit) @7011   2 months Nicklas Nordborg References #1393: Release exporter changes due to Oncoarray data …
(edit) @7010   2 months Nicklas Nordborg References #1451: Release exporter changes due to Methylation data …
(edit) @7009   2 months Nicklas Nordborg References #1451: Release exporter changes due to Methylation data A …
(edit) @7008   2 months Nicklas Nordborg References #1452: Release importer changes due to new subtypes from …
(edit) @7007   2 months Nicklas Nordborg References #1393: Release exporter changes due to Oncoarray data …
(edit) @7006   2 months Nicklas Nordborg References #1451: Release exporter changes due to Methylation data …
(edit) @7005   2 months Nicklas Nordborg Changes for future release Reggie 4.44
(edit) @7004   2 months Nicklas Nordborg Tagging Reggie 4.43
(edit) @7003   2 months Nicklas Nordborg Preparing to release Reggie 4.43
(edit) @7002   2 months Nicklas Nordborg References #1446: Add an annotation for extra PAD values Fixed a …
(edit) @7001   2 months Nicklas Nordborg Fixes #1450: Hisat/2023 alignments should now show up in the Genotype …
(edit) @7000   2 months Nicklas Nordborg Fixes #1449: The JSON import wizard should not reserve specimen names …
(edit) @6999   2 months Nicklas Nordborg Fixes #1448: The "ReferenceDate?" annotation should not be used as a …
(edit) @6998   2 months Nicklas Nordborg References #1446: Add an annotation for extra PAD values Added a link …
(edit) @6997   2 months Nicklas Nordborg Fixes #1447: The "All first names" field in the pathology referral …
(edit) @6996   2 months Nicklas Nordborg References #1446: Add an annotation for extra PAD values Display the …
(edit) @6995   2 months Nicklas Nordborg References #1446: Add an annotation for extra PAD values The …
(edit) @6994   2 months Nicklas Nordborg References #1446: Add an annotation for extra PAD values The …
(edit) @6993   2 months Nicklas Nordborg References #1446: Add an annotation for extra PAD values If the …
(edit) @6992   2 months Nicklas Nordborg References #1446: Add an annotation for extra PAD values The JSON …
(edit) @6991   2 months Nicklas Nordborg References #1446: Add an annotation for extra PAD values Added a …
(edit) @6990   2 months Nicklas Nordborg References #1446: Add an annotation for extra PAD values Added …
(edit) @6989   2 months Nicklas Nordborg Changes for future release Reggie 4.43
(edit) @6988   2 months Nicklas Nordborg Tagging Reggie 4.42
(edit) @6987   2 months Nicklas Nordborg Preparing to release Reggie 4.42
(edit) @6986   2 months Nicklas Nordborg References #1444: Implement support for submitting jobs to a specific …
(edit) @6985   2 months Nicklas Nordborg Changes for future release Job scheduler extension 1.9
(edit) @6984   2 months Nicklas Nordborg Tagging Job scheduler extension 1.8
(edit) @6983   2 months Nicklas Nordborg Preparing to release Job scheduler extension 1.8
(edit) @6982   2 months Nicklas Nordborg References #1444: Implement support for submitting jobs to a specific …
(edit) @6981   2 months Nicklas Nordborg References #1444: Implement support for submitting jobs to a specific …
(edit) @6980   2 months Nicklas Nordborg References #1444: Implement support for submitting jobs to a specific …
(edit) @6979   2 months Nicklas Nordborg References #1444: Implement support for submitting jobs to a specific …
(edit) @6978   2 months Nicklas Nordborg References #1445: Add support for submitting jobs to a specific …
(edit) @6977   2 months Nicklas Nordborg References #1444: Implement support for submitting jobs to a specific …
(edit) @6976   2 months Nicklas Nordborg Fixes #1443: When comparing a date without time to a date with time …
(edit) @6975   3 months Nicklas Nordborg Fixes #1442: Implement an option to prefer that existing value on a …
(edit) @6974   3 months Nicklas Nordborg Fixes #1441: Ignore entries with only the text "(Fritext)" …
(edit) @6973   3 months Nicklas Nordborg Merge Reggie 4.41.4 to the trunk.
(edit) @6972   3 months Nicklas Nordborg Tagging Reggie 4.41.4
(edit) @6971   3 months Nicklas Nordborg Preparing to release Reggie 4.41.4
(edit) @6970   3 months Nicklas Nordborg Fixes #1440: Add option for running Picard MarkDuplicates? with …
(edit) @6969   3 months Nicklas Nordborg References #1440: Add option for running Picard MarkDuplicates? with …
(edit) @6968   3 months Nicklas Nordborg Fixes #1439: The "Use latest lot numbers" doesn't work after receiving …
(edit) @6967   3 months Nicklas Nordborg Fixes #1438: Check for mismatches between the suffix in the SCANB_ID …
(edit) @6966   3 months Nicklas Nordborg Fixes #1437: Allow alternate options for "Sample type"
(edit) @6965   3 months Nicklas Nordborg Fixes #1436: Re-order entries in the JSON file
(edit) @6964   3 months Nicklas Nordborg Fixes #1435: Include the "Reggie" column with a link to the "Case …
(edit) @6963   3 months Nicklas Nordborg References #1434: Improve the release exporter step that searches for …
(edit) @6962   3 months Nicklas Nordborg Fixes #1434: Improve the release exporter step that searches for …
(edit) @6961   4 months Nicklas Nordborg Fixes #1433: New paths to run-archive
(edit) @6960   4 months Nicklas Nordborg Merge Reggie 4.41.3 to the trunk
(edit) @6959   4 months Nicklas Nordborg Tagging Reggie 4.41.3
(edit) @6958   4 months Nicklas Nordborg Preparing to release Reggie 4.41.3
(edit) @6957   4 months Nicklas Nordborg Fixes #1432: Create a link between the specimen and the archived JSON …
(edit) @6956   4 months Nicklas Nordborg Fixes #1431: More validation of library barcodes
(edit) @6955   4 months Nicklas Nordborg Merge Reggie 4.41.2 to the trunk
(edit) @6954   4 months Nicklas Nordborg Tagging Reggie 4.41.2
(edit) @6953   4 months Nicklas Nordborg Preparing to release Reggie 4.41.2
(edit) @6952   4 months Nicklas Nordborg Fixes #1430: Change default group permissions for archived JSON and …
(edit) @6951   4 months Nicklas Nordborg Fixes #1429: Adjust Lysate.Used quantity so that it is not more than …
(edit) @6950   4 months Nicklas Nordborg Fixes #1428: Allow some information to be different when there are …
(edit) @6949   4 months Nicklas Nordborg References #1427: Make use of the header information in FASTQ files …
(edit) @6948   4 months Nicklas Nordborg References #1427: Make use of the header information in FASTQ files …
(edit) @6947   4 months Nicklas Nordborg References #1427: Make use of the header information in FASTQ files …
(edit) @6946   4 months Nicklas Nordborg Merge Reggie 4.41.1 to the trunk.
(edit) @6945   4 months Nicklas Nordborg Tagging Reggie 4.41.1
(edit) @6944   4 months Nicklas Nordborg Preparing to release Reggie 4.41.1
(edit) @6943   4 months Nicklas Nordborg References #1426: Warn/fix unreasonble values for RNA remaining …
(edit) @6942   4 months Nicklas Nordborg References #1425: JSON and FASTQ files that are stored in the …
(edit) @6941   4 months Nicklas Nordborg References #1425: JSON and FASTQ files that are stored in the …
(edit) @6940   4 months Nicklas Nordborg Fixes #1424: Incorrect path to UCSC_hg38_knownGenes_22sep2014.gtf
(edit) @6939   4 months Nicklas Nordborg Fixes #1423: NullPointerException? when starting Methylation beta-analysis
(edit) @6938   4 months Nicklas Nordborg Creating bugfix branch for Reggie 4.41
(edit) @6937   4 months Nicklas Nordborg Changes for future relase Reggie 4.42
(edit) @6936   4 months Nicklas Nordborg Tagging Reggie 4.41
(edit) @6935   4 months Nicklas Nordborg Preparing to release Reggie 4.41
(edit) @6934   4 months Nicklas Nordborg References #1422: Add default configuration options for the new Slurm …
(edit) @6933   4 months Nicklas Nordborg References #1422: Add default configuration options for the new Slurm …
(edit) @6932   4 months Nicklas Nordborg References #1422: Add default configuration options for the new Slurm …
(edit) @6931   4 months Nicklas Nordborg References #1422: Add default configuration options for the new Slurm …
(edit) @6930   4 months Nicklas Nordborg References #1422: Add default configuration options for the new Slurm …
(edit) @6929   4 months Nicklas Nordborg References #1420: Updates to registration of specimen handled by …
(edit) @6928   4 months Nicklas Nordborg References #1420: Updates to registration of specimen handled by …
(edit) @6927   4 months Nicklas Nordborg References #1420: Updates to registration of specimen handled by …
(edit) @6926   4 months Nicklas Nordborg References #1420: Updates to registration of specimen handled by …
(edit) @6925   4 months Nicklas Nordborg References #1420: Updates to registration of specimen handled by …
(edit) @6924   4 months Nicklas Nordborg References #1420: Updates to registration of specimen handled by …
(edit) @6923   4 months Nicklas Nordborg References #1420: Updates to registration of specimen handled by …
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