source: trunk

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Diff Rev Age Author Log Message
(edit) @396   16 years dominic added util jar files and build file etc
(edit) @395   16 years dominic updated jar files and constant class
(edit) @394   16 years dominic updated jar files
(edit) @393   16 years dominic updated readme txt
(edit) @392   16 years dominic updated readme txt
(edit) @391   16 years dominic added ebi-utils jar and new build filefor affy plugin
(edit) @390   16 years dominic added ebi-utils jar and new build file
(edit) @389   16 years Peter Johansson refs #53 working on new INSTALL instructions for WeNNI plugin
(edit) @388   16 years dominic update readme file with warning of the importer usage
(edit) @387   16 years dominic updated ta2mageimporter.jar
(edit) @386   16 years dominic updated jar file
(edit) @385   16 years dominic
(edit) @384   16 years dominic new annotation type and cv importer class files and build file
(edit) @383   16 years dominic new affy class files and build file
(edit) @382   16 years dominic new affy class files and build file
(edit) @381   16 years dominic new jar dist
(edit) @380   16 years dominic
(edit) @379   16 years dominic
(edit) @378   16 years dominic
(edit) @377   16 years dominic
(edit) @376   16 years dominic
(edit) @375   16 years dominic
(edit) @374   16 years dominic
(edit) @373   16 years dominic
(edit) @372   16 years dominic updated readme and creit changes
(edit) @371   16 years dominic jar
(edit) @370   16 years dominic
(edit) @369   16 years dominic changed readme.txt character format to ansi
(edit) @368   16 years dominic updated readme.txt
(edit) @367   16 years dominic missing jar
(edit) @366   16 years dominic readme update
(edit) @365   16 years dominic credit
(edit) @364   16 years dominic credit
(edit) @363   16 years dominic credit
(edit) @362   16 years dominic Tab2mage Importer. First check in
(edit) @361   16 years dominic remove redundant class: arrydesignimport
(edit) @360   16 years dominic Repackaged Tab2Mage Exporter as a separate plugin from base2 core plugins
(edit) @359   16 years dominic Annotation Types and Cv BatchImporter?. 1st check in.
(edit) @358   16 years dominic AffyMetrix? Array Design Btach Importer. 1st check in.
(edit) @357   16 years Peter Johansson setting property Id.
(edit) @356   16 years Peter Johansson fixing Id keyword
(edit) @355   16 years Peter Johansson fixes #72 NNIFileConverter is not built in BASE2-mode.
(edit) @354   16 years Jari Häkkinen Restoring files that was commited by mistake.
(edit) @353   16 years Jari Häkkinen Creating new directory to host plugins developed at EBI.
(edit) @352   16 years Peter Johansson adding first line in README file
(edit) @351   16 years Peter Johansson adding classpath to BASE2CorePlugins.jar
(edit) @348   16 years Jari Häkkinen Preparing 0.7 release of se.lu.thep.affymetrix, update copyrights.
(edit) @347   16 years Jari Häkkinen Preparing 0.7 release of se.lu.thep.affymetrix
(edit) @346   16 years Jari Häkkinen Preparing 0.7 release of se.lu.thep.affymetrix
(edit) @345   16 years Jari Häkkinen Fixes #67 and #68. Added information on how to install in Microsoft …
(edit) @344   16 years Jari Häkkinen Adding entries to ChangeLog?.
(edit) @343   16 years Jari Häkkinen Fixes #69. DBControl usage is improved.
(edit) @342   16 years Jari Häkkinen Fixed spelling errors.
(edit) @341   16 years Peter Johansson update copyright
(edit) @340   16 years Peter Johansson fixes #65 version number in plugin_WeNNI.base is generated …
(edit) @339   16 years Jari Häkkinen Added comment (recommendation) on using presence filter in BASE 1.
(edit) @338   16 years Peter Johansson using ac macro fully rather than bashing
(edit) @336   16 years Peter Johansson adding javacflags in configure
(edit) @335   16 years Peter Johansson slimming down files refs #50
(edit) @334   16 years Peter Johansson first compilable version refs #50
(edit) @333   16 years Peter Johansson improved Makefile.am refs #50
(edit) @332   16 years Peter Johansson class is BASE2 specific and should be in that directory
(edit) @331   16 years Peter Johansson initial commit for abstract plugin support class for running external …
(edit) @330   16 years Peter Johansson clean removes entire .build file structure
(edit) @329   16 years Peter Johansson overriding autotools variable bindir, so bins are installed in …
(edit) @328   16 years Peter Johansson cleaning up and adding --with-gsl option fixes #59
(edit) @327   16 years Peter Johansson refs #58 variable INSTALLDIR is set in configure and propagated out to …
(edit) @326   16 years Peter Johansson fixes #325 make check works
(edit) @325   16 years Peter Johansson refs #62 make check now works in base1 mode
(edit) @324   16 years Peter Johansson fixes #57. --enable-base=X where X is either base1 base2 or stand-alone.
(edit) @323   16 years Peter Johansson minor fixes
(edit) @322   16 years Peter Johansson fixed typo
(edit) @321   16 years Peter Johansson improved flags to local c++_tools
(edit) @320   16 years Peter Johansson fixes #51. configure option state {base1, base2, stand-alone} where …
(edit) @319   16 years Peter Johansson empty WeNNI.java and some minor changes in configure.ac stolen from yat
(edit) @318   16 years Peter Johansson adding Makefile.am for base2 dir
(edit) @317   16 years Peter Johansson wikized README et al and corrected configure.ac
(edit) @316   16 years Peter Johansson replaced todo items with a reference to todo list in wiki
(edit) @315   16 years Peter Johansson changed structure again. NNIFileConverter is moved to bin, which means …
(edit) @314   16 years Peter Johansson updating copyrights in modified files and added some Makefile.am
(edit) @313   16 years Peter Johansson new file structure for BASE2
(edit) @312   16 years Peter Johansson removed imports not needed and added dependency in Makefile. Inherited …
(edit) @311   16 years Peter Johansson creating a base class for plier and rma
(edit) @310   16 years Peter Johansson oops now we can compile again. sorry about that
(edit) @309   16 years Peter Johansson changed name of the package in copyrights. It is no longer RMAExpress
(edit) @308   16 years Peter Johansson bumping version number
(edit) @305   16 years Jari Häkkinen Added fixed items to list.
(edit) @304   16 years Jari Häkkinen Bumped version number.
(edit) @303   16 years Jari Häkkinen Improved speed.
(edit) @302   16 years Peter Johansson changed to log2 base
(edit) @301   16 years Jari Häkkinen Added clarification on result scale.
(edit) @300   16 years Peter Johansson Result from plier is now logarithmized prior imported to BASE
(edit) @299   16 years Jari Häkkinen Wiki page changed.
(edit) @298   16 years Jari Häkkinen Fixing broken sed substitution.
(edit) @297   16 years Jari Häkkinen Fixing copyright year.
(edit) @296   16 years Peter Johansson removing debug ''
(edit) @295   16 years Jari Häkkinen Added Plier class name to instructions.
(edit) @294   16 years Peter Johansson typo
(edit) @293   16 years Peter Johansson improved text on PLIER
(edit) @292   16 years Jari Häkkinen Fixing precompiled dependency.
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