Opened 13 years ago

Closed 12 years ago

Last modified 12 years ago

#125 closed enhancement (duplicate)

MeV ... files are now supported (by the BASEcore) in the BASE analysis tree

Reported by: Jari Häkkinen Owned by: Nicklas Nordborg
Priority: major Milestone:
Component: net.sf.basedb.mev Keywords:
Cc:

Description

The MeV extension can be improved to utilize the support of storing files in the analysis tree.

Relates to http://base.thep.lu.se/ticket/1029 and http://base.thep.lu.se/attachment/ticket/1029/files_in_analysis-0.1.txt

When someone decides to work on this ticket a few things need to be addressed:

  • Split this ticket into several tickets.
  • Write a specification of what is done be done.
  • Generate sample MeV files.

At least one each (expression data) for GenePix, Affymetrix, and CGH data. Illumina WG and SNP?

  • Check if there is a module for reading MeV files readily at hand in the MeV project.
  • For MeV we need to setup a MeV plug-in in parallel to the MeV extension. The extension makes it possible to add a MeV button to BASE whereas the plug-in is needed to ...

Change History (3)

comment:1 Changed 13 years ago by Jari Häkkinen

Summary: Files are now supported (by the BASEcore) in the BASE analysis treeMeV ... files are now supported (by the BASEcore) in the BASE analysis tree

comment:2 Changed 12 years ago by Nicklas Nordborg

Resolution: duplicate
Status: newclosed

Replaced by #241, #242 and #243.

comment:3 Changed 12 years ago by Jari Häkkinen

Milestone: MEV Launcher v1.x
Note: See TracTickets for help on using tickets.