Opened 10 years ago

Last modified 10 years ago

#311 closed task

Updates required for BASE 3 support — at Version 1

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: blocker Milestone: Illumina package v1.7
Component: net.sf.basedb.illumina Keywords:
Cc:

Description (last modified by Nicklas Nordborg)

Need to make some packaging changes. Eg. Plugin definitions should be moved into extensions.xml. Plugin configurations file should be renamed to plugin-configurations.xml. Build script changes needed since BASE jar file have different names. See the net.sf.basedb.examples build script for ideas.

Verify that the plug-ins work with BASE 3.

Big changes in the data file validation mechanism. This package includes BgxFileHandler and SnpCvsFileHandler. We need to convert them to extensions and fix the installation program for data file types.

Change History (1)

comment:1 Changed 10 years ago by Nicklas Nordborg

Description: modified (diff)
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