Opened 10 years ago

Last modified 10 years ago

#311 closed task

Updates required for BASE 3 support — at Version 2

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: blocker Milestone: Illumina package v1.7
Component: net.sf.basedb.illumina Keywords:
Cc:

Description (last modified by Nicklas Nordborg)

Need to make some packaging changes. Eg. Plugin definitions should be moved into extensions.xml. Plugin configurations file should be renamed to plugin-configurations.xml. Build script changes needed since BASE jar file have different names. See the net.sf.basedb.examples build script for ideas.

Verify that the plug-ins work with BASE 3.

Big changes in the data file validation mechanism (http://base.thep.lu.se/ticket/1598). This package includes BgxFileHandler and SnpCvsFileHandler. We need to convert them to extensions and fix the installation program for data file types.

Change History (2)

comment:1 Changed 10 years ago by Nicklas Nordborg

Description: modified (diff)

comment:2 Changed 10 years ago by Nicklas Nordborg

Description: modified (diff)
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