Opened 15 years ago

Last modified 15 years ago

#45 closed task

PLIER - Probe Logaritmic Intensity ERror — at Initial Version

Reported by: Peter Johansson Owned by: Jari Häkkinen
Priority: major Milestone:
Component: se.lu.thep.affymetrix Keywords:
Cc:

Description

There appears two be alternative roads to incorporate PLIER.

PLIER is part of APT (Affymetrix Power Tools), which is a package of several commandline tools for different kinds of Affy data. As far as I can understand the whole package is licensed under GPL and mostly implemented in C++.

An alternative way appears through BioConductor, where PLIER is downloadable from http://www.bioconductor.org/download/oldrelease/bioc1.6/popular/plier.html

Perhaps the latter alternative is preferable as a connection to !BioC is not far away. Yet I present both roads here to let their pros and cons be discussed.

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