Recent Changes
Feb 4, 2019
COSTANZA, [CO]nfocal [ST]ack [AN]aly[Z]er [A]pplication
Authors:
Michael Green, Pawel Krupinski, Pontus Melke, Patrik Sahlin, Henrik Jönsson, Computational Biology & Biological Physics, Lund University
History:
2008/01/28: first version
2008/12/11: 1.0
Source:
Available via main current repository https://gitlab.com/slcu/teamHJ/Costanza .
Installation:
Download and extract http://www.thep.lu.se/~henrik/costanza/download/Costanza.zip to the plugins folder, or subfolder, restart ImageJ, and there will be a new "Costanza" directory in the Plugins menu or submenu.
Requires:
ImageJ 1.38 or newer.
Description:
Costanza is used to segment compartments (cells) in a stack and to extract quantitative data for the extracted compartments, including intensities from a second stack.
Usage:
Open the Costanza plugin and the image/stack you want to segment. Chose parameters for the including processes, select input and output options and run the plugin. More information available in http://www.thep.lu.se/~henrik/Costanza/doc/userguide.pdf .
