Changes between Version 7 and Version 8 of WikiStart


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Timestamp:
Oct 12, 2016, 4:59:17 PM (10 years ago)
Author:
henrik
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  • WikiStart

    v7 v8  
    1111
    1212Jönsson et al (2006) ''PNAS''
     13
    1314Cho, Jönsson et al (2006) ''PLoS Biology''
     15
    1416Jönsson and Levchenko (2005) ''Multiscale Modeling and Simulation''
     17
    1518Gruel et al (2016) ''Science Advances''
    1619
    … …  
    1821
    1922Hamant, Heisler, Jönsson et al (2008) ''Science''
     23
    2024Bozorg et al (2014) ''PLoS Comp Biol''
    2125
    22 Some of the features of the software are:
     26= Features =
     27
     28Some of the features of the Organism-Tissue software are:
    2329
    2430* It includes several numerical solvers for the ordinary differential equations, also with noise, and for stochastic simulations (Organism).
    … …  
    3642* It includes visualisation and analysis tools.
    3743
    38 * it includes an optimisation environment where data from multiple mutants can be used to define a cost function.
     44* it includes an optimisation environment where data from multiple mutants can be used to define a cost function (only Organism).
     45
     46= Development =
    3947
    4048The software is mainly developed at the Computational Biology & Biological
    … …  
    93101code is ANSI-compatible and has been tested to compile on Linux (default for the provided Makefile), Mac OS X and
    94102Windows (using Cygwin) platforms. It is dependent on boost and for plotting OpenGL.
     103
     104= Download =
     105
     106The source code is freely available upon request (henrik.jonsson@slcu.cam.ac.uk).