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dictionary @ 4091

Last change on this file since 4091 was 4091, checked in by olle, 12 years ago

Refs #668. Support for running msInspect feature detection from Proteios SE updated by labeling field set with strategy selection as "Advanced options", and hide its contents by default:

Class/file action/file/ UseSpectrumFileForMsInspectSearchExtension?.java in client/servlet/ updated in protected method void runMe() by labeling field set with strategy selection as "Advanced options", and hide its contents by default.

English dictionary file locale/en/dictionary in client/servlet/ updated with new string key.

File size: 36.8 KB

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1	# $Id: Controller.java 52 2006-04-09 20:28:45Z gregory $
2
3	# Copyright (C) 2006 Gregory Vincic
4	# Copyright (C) 2007 Fredrik Levander, Gregory Vincic
5
6	# Files are copyright by their respective authors. The contributions to
7	# files where copyright is not explicitly stated can be traced with the
8	# source code revision system.
9
10	# This file is part of Proteios.
11	# Available at http://www.proteios.org/
12
13	# Proteios is free software; you can redistribute it and/or
14	# modify it under the terms of the GNU General Public License
15	# as published by the Free Software Foundation; either version 2
16	# of the License, or (at your option) any later version.
17
18	# Proteios is distributed in the hope that it will be useful,
19	# but WITHOUT ANY WARRANTY; without even the implied warranty of
20	# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
21	# GNU General Public License for more details.
22
23	# You should have received a copy of the GNU General Public License
24	# along with this program; if not, write to the Free Software
25	# Foundation, Inc., 59 Temple Place - Suite 330,
26	# Boston, MA 02111-1307, USA.
27
28	# Keep the words sorted. This is easily done in unix with the following oneliner
29	#
30	# cat dictionary \| grep -v '^#' \| sort >> dictionary
31	#
32	# and then remove the previous list of words in this file
33	#
34
35	=
36	Abort=Abort
37	About=About
38	Accession=Accession
39	AccessionNumber=Accession no.
40	Accuracy=Accuracy
41	Action=Action
42	ActiveProject=Active Project
43	ActiveProjectId=Active Project ID
44	AddContactInfo=Add contact info
45	AddSampleInfo=Add sample name
46	AddDiGESeparation=Add DiGE
47	AddFiles=Add Files
48	AdditionalInformation=Additional Information
49	AddPreviousDimension=Add previous separation dimension
50	AddProtocol=Add Protocol
51	Address=Address
52	Administrator=Administrator
53	All=All
54	AllowedFDR=Allowed FDR
55	AnalysisTime=Analysis Time
56	AnalyzerComment=Analyzer Comment
57	AnalyzerInformation=Analyzer Information
58	Analyzers=Analyzers
59	AnalyzerType=Analyzer Type
60	AnnotatedBiomaterials=Annotated biomaterials
61	Annotation=Annotation
62	AnnotationName=Annotation Name
63	Annotations=Annotations
64	ApexIntensity=Apex Intensity
65	ApexRetentionTimeInMinutes=Apex retention time (min)
66	AppendExtraIdToPrefix=Append optional gel external id or local sample id to prefix
67	AppendTimestampToPrefix=Append YYYYMMDD_HHMM timestamp to prefix
68	Apply=Apply
69	AssociatedFiles=Associated Files
70	Attribute=Attribute
71	Attributes=Attributes
72	AvailableGels=Available gels
73	Basic=Basic
74	BatchImportBatchBioMaterialImportPreview=Batch BioMaterial Import Preview
75	BatchImportBioMaterialFixedColumns=BioMaterial fixed columns
76	BatchImportBioMaterialInfo=BioMaterial info
77	BatchImportIndex=Index
78	BatchImportInputFile=InputFile
79	BatchImportParentIndex=Parent Index
80	BatchImportSummaryError=Summary: ERROR
81	BatchImportSummaryOk=Summary: OK
82	BioMaterials=Biomaterials
83	BioSource=BioSource
84	Blocker=Blocker
85	Bytes=Bytes
86	ChangeImageFile=Change image file
87	ChangePassword=Change password
88	ChangeProtocolFile=Change Protocol File
89	Charge=Charge
90	ChargeState=Charge State
91	ClassName=Class Name
92	ClearCombinedHits=Clear combinations
93	ClearFeatures=Clear Feature Table
94	ClearHits=Clear Hits Table
95	ClearHitsQuestion=All contents of the hits table will be erased, do you want to continue?
96	ClearSelectedHits=Clear selected hits
97	ClearSpecialHits=Clear Hits
98	Close=Close
99	Closed=Closed
100	CollectedFractions=Number of collected fractions
101	Column=Column
102	ColumnDisplayOrder=Display Order
103	ColumnFilterSettings=Column Filter Settings
104	Columns=Columns
105	ColumnSortPriority=Priority
106	Combined=Combined
107	CombinedFDR=Combined Search FDR
108	CombinedFDRUpperCutoff=Combined search FDR upper cutoff
109	CombinedHitsMenu=Combined Hits
110	CombinedHitsReport=Combined Hits Report
111	comment=Comment
112	Comment=Comment
113	ComparePeptides=Compare peptides
114	Compressed=Compressed
115	CompressedSizeInBytes=Compressed size (bytes)
116	ConcentrationInGramsPerLiter=Concentration (g protein/l)
117	Condition=Condition
118	Configure=Configure
119	ConfigureTable=Configure Table
120	Confirm=Confirm
121	Contact=Contact
122	ContactInfo=Contact Info
123	ContactInformation=Contact Information
124	Content=Content
125	Copyright=Copyright
126	Coverage=Coverage
127	Create=Create
128	Created=Created
129	CreateDemoUser=Create demo user
130	CreateImportJobs=Create import job[s]
131	CreateJobs=Create job[s]
132	CreationEvent=Creation event
133	CutOff=Cut off
134	Databases=Databases
135	Date=Date
136	Delete=Delete
137	DeleteDirectory=Delete directory
138	DeltaMassInDaltons=Deltamass (Da)
139	denaturatingAgent=Denaturating Agent
140	DenaturatingAgent=Denaturating Agent
141	Description=Description
142	Detached=Detached
143	DetectorAcquisitionMode=Detector Acquisition Mode
144	DetectorComment=Detector Comment
145	DetectorInformation=Detector Information
146	DetectorType=Detector Type
147	DigestParameters=Digest parameters
148	Directories=Directories
149	Directory=Directory
150	DirectorySharing=Directory Sharing
151	Download=Download
152	Edit=Edit
153	EllipsisMenuItem=
154	email=email
155	Email=E-mail
156	EMail=E-mail
157	Empty=Empty
158	EmptyTrash=Empty Trash
159	EndDate=End Date
160	Ended=Ended
161	EndTimeToleranceMinutes=End retention time tolerance (min)
162	EndRetentionTimeInMinutes=End retention time (min)
163	EnterContactData=Enter Contact Data
164	EnterNewLocalSampleId=Or enter new:
165	EnterSampleData=Enter Sample Data
166	EnterUsedQuantityInMicroLiters=Specify used quantity (µl)
167	EnterUsedQuantity=Specify used quantity
168	EntryDate=Entry Date
169	Error=Error
170	EstimatedExecutionTime=Estimated execution time
171	E-value=E-Value
172	EValue=E-Value
173	EventComment=Comment
174	eventDate=Event Date
175	EventDate=Event Date
176	Events=Events
177	EventTracker=Event Tracker
178	EventType=Event Type
179	ExclusionList=Exclusion/inclusion list
180	ExclusionListFormat=Format
181	ExpectationValue=E-Value
182	ExpectationValue=Expectation Value
183	ExperimentalMassInDaltons=Experimental Mass (Da)
184	ExportAllItems=All items
185	ExportMode=Export mode
186	ExportProperties=Export properties
187	ExportShownItemsOnly=Shown items only
188	ExportToFile=Export to File
189	Extensions=Extensions
190	ExtensionsForDirectories=Extensions
191	ExtensionsForFiles=Extensions
192	ExtensionsForFileTypes=Extensions
193	ExtensionsForHits=Extensions
194	externalId=External ID
195	ExternalId=External ID
196	ExternalIdFilter=External ID filter
197	ExtractExternalId=Extract external ID
198	Extract=Extract
199	ExtractOriginalQuantity=Extract original quantity
200	Extracts=Extracts
201	FastJobQueue=Fast
202	Feature=Feature
203	FeatureExternalId=Feature External ID
204	FeatureFile=Feature File
205	Features=Features
206	File=File
207	FileName=Filename
208	Filename=Filename
209	Files=Files
210	FileType=File type
211	FileWise=Per file
212	FilterValue=Filter value
213	FilterValueWildCard=Filter value (% as wild card)
214	First=First
215	Fixed=Fixed
216	FixedModification=Fixed Modification
217	FractionId=Fraction ID
218	FractionIdOptional=Fraction ID (optional)
219	FractionNames=Fraction identifiers
220	FractionVolume=Fraction volume (µl)
221	FragmentationType=Fragmentation Type
222	FromAddress=From (address)
223	FromName=From (name)
224	GelBased=Gel Based
225	GelElectrophoresis=Gel Electrophoresis
226	GelExternalId=Gel
227	gelExtId=External ID
228	GelExtId=External ID
229	Gel=Gel
230	Gels=Gels
231	GenerateProteins=Generate protein hits
232	GenericFormTest=Generic Form Test
233	Groups=Groups
234	Guest=Guest
235	HcdOnly=Only use HCD reporter ions
236	Help=Help
237	HighPriorityQueue=High priority
238	Hit=Hit
239	HitId=Hit ID
240	HitsCombination=Search results in combined hit
241	HitsComparisonCategory=Category
242	HitsComparisonExtraPrefix=Append project names to prefix
243	HitsComparisonIgnoreCombinedFDRUpperCutoff=Ignore Combined Search FDR
244	HitsComparisonMenu=Hits Comparison
245	HitsComparisonOnlyUseLeadingProteins=Only use leading proteins
246	HitsComparisonReportBtn=Hits Comparison Report
247	HitsComparisonReportComparisonType=Hits Comparison Report - Comparison type
248	HitsComparisonReportComparisonTypeSelect=Comparison type
249	HitsComparisonReportFilterSettings1=Hits Comparison Report - Filter Settings Hit Selection 1
250	HitsComparisonReportFilterSettings2=Hits Comparison Report - Filter Settings Hit Selection 2
251	HitsComparisonReportFilterSettings=Hits Comparison Report - Filter Settings
252	HitsComparisonReport=Hits Comparison Report
253	HitsComparisonReportOutput=Hits Comparison Report - Output
254	HitsComparisonReportProject1CombinedFDRUpperCutoff=Combined Search FDR
255	HitsComparisonReportProject1=Hit Selection 1 Project
256	HitsComparisonReportProject1Id=Project ID
257	HitsComparisonReportProject1Name=Project Name
258	HitsComparisonReportProject2CombinedFDRUpperCutoff=Combined Search FDR
259	HitsComparisonReportProject2=Hit Selection 2 Project
260	HitsComparisonReportProject2Id=Project ID
261	HitsComparisonReportProject2Name=Project Name
262	HitsComparisonReportProjectSelection=Hits Comparison Report - Project Selection
263	HitsComparisonReportProteinSettings=Hits Comparison Report - Protein Comparison Settings Only
264	HitsComparisonReportScoreTypeSelect=Score Type
265	HitSelectionNumber=Hit Selection #
266	Hits=Hits
267	HitsImport=Hits Import
268	HitsImportMenu=Hits Import
269	HitsImportNonGelWizard=Non-Gel Hits Import Wizard
270	HitsImportWizard=Hits Import Wizard
271	HitsReport=Hits Report
272	HitsReportsMenu=Reports
273	HomeDirectory=Home Directory
274	Home=Home
275	IdentificationResultFileName=Search results file
276	IdentificationResultFile=Search results file
277	Id=ID
278	ImportedPeakLists=Imported Peak Lists
279	ImportedSearches=Imported Searches
280	ImportHitsNonGelWizardRegexPattern=Regex pattern:
281	ImportHitsNonGelWizardStep1FormLegend=Step 1. Register peaklist files for local sample ID
282	ImportHitsNonGelWizardStep2FormLegend=Step 2. Import protein identification results
283	ImportHitsNonGelWizardUseRegexPattern=Use regex pattern to parse fraction ID from filename
284	ImportHitsWizardStep1FormLegend=Step 1. Add spots and mapping to plates
285	ImportHitsWizardStep2FormLegend=Step 2. Register peaklist files
286	ImportHitsWizardStep3FormLegend=Step 3. Import protein identification results
287	Import=Import
288	ImportPlugins=Import plugins
289	Imports=Imports
290	InContext=InContext
291	InDatabase=In Database
292	InExtensions=In extensions
293	InProject=in project
294	InputSpectrumFileName=Input Spectrum File Name
295	Installed=Installed
296	Install=Install
297	Institution=Institution
298	Instruction=Instruction
299	InstrumentComment=Instrument Comment
300	InstrumentGeneral=Instrument General
301	InstrumentInformation=Instrument Information
302	Instrument=Instrument
303	InstrumentName=Instrument Name
304	InstrumentSerialNo=Instrument Serial No
305	IntegratedIntensity=Integrated Intensity
306	intensity=intensity
307	Interactive=Interactive
308	IonizationMode=Ionization Mode
309	IonizationType=Ionization Type
310	IPG=IPG
311	IPGs=IPGs
312	IPGsLongVersion=IPGs (Immobilized pH Gradients)
313	isEmpty=is empty
314	IsEmpty=is empty
315	IsMicrotitrePlate=Is microtitre plate
316	isNotADirectory=is not a directory
317	IsNotADirectory=is not a directory
318	isSecondary=Match related
319	itemDeleted=item deleted
320	ItemId=Item ID
321	Item=Item
322	itemsDeleted=items deleted
323	JarFile=JarFile
324	JarPath=JarPath
325	Job=Job
326	Jobs=Jobs
327	JobType=Job type
328	KeepRandom=Keep decoy hits
329	LabeledExtract=Labeled Extract
330	LabeledExtracts=Labeled Extracts
331	Labeled=Labeled
332	LabelExtract=Label Extract
333	Label=Label
334	largeProject=Large Project
335	LargeProject=Large Project
336	Last=Last
337	LastServerMessages=Last Server Messages
338	lengthInCentiMeters=Length (cm)
339	LengthInCentiMeters=Length (cm)
340	LIMS=LIMS
341	LocalSampleId=Local sample ID
342	Location=Location
343	LoggedIn=Logged in
344	LoggedInUsers=Logged-In Users
345	Login=Login
346	LoginName=Login
347	LogInTime=Login time
348	Logout=Logout
349	MailServer=Mail server
350	MakeExtract=Make Extract
351	MakeSecondaryExtract=Make Secondary Extract
352	MakeSecondaryLabeledExtract=Make Secondary Extract
353	MascotDataFormatSelect=Data format
354	MascotDecoySelect=Decoy
355	MascotEnzymeSelect=Enzyme
356	MascotErrorTolerantSelect=Error tolerant
357	MascotFirstSearchNumber=First search number
358	MascotFixedMods=Fixed modifications
359	MascotInstrumentSelect=Instrument
360	MascotLastSearchNumber=Last search number
361	Mascot=Mascot
362	MascotMascotQuery=Query
363	MascotMassIonTypeSelect=Mass values
364	MascotMassTypeSelect=Mass type
365	MascotMissedCleavagesSelect=Maximum missed cleavages
366	MascotMsMsToleranceUnitSelect=MS/MS tolerance unit
367	MascotMsMSTol=MS/MS tol. &#177
368	MascotOutputDirectory=Directory for retrieved files
369	MascotOutputDirectoryId=Id of directory for retrieved files
370	MascotParameterFile=Mascot Parameters File
371	MascotParameterSetExtra=Mascot - Extra
372	MascotParameterSetGeneral=Mascot - General
373	MascotParameterSetGeneralMIS=Mascot - General - MS/MS Ions Search
374	MascotParameterSetGeneralPMF=Mascot - General - Peptide Mass Fingerprint
375	MascotParameterSetGeneralSQ=Mascot - General - Sequence Query
376	MascotParameterSet=Mascot parameter set
377	MascotParameterSets=Mascot parameter sets
378	MascotParameterSetsInDatabase=Mascot parameter sets in database
379	MascotParameterSetStorage=Mascot parameter sets
380	MascotParameterSetStorageProperties=Mascot Parameter Set Storage Properties
381	MascotParameterTemplateFile=Mascot Parameters Template File
382	MascotPeptideChargeSelect=Peptide charge
383	MascotPeptideIsotopeErrorSelect=# <sup>13</sup>C
384	MascotPeptideToleranceUnitSelect=Peptide tolerance unit
385	MascotPepTol=Peptide tol. &#177
386	MascotPrecursor=Precursor [m/z]
387	MascotProteinMass=Protein mass [kDa]
388	MascotQuantitationSelect=Quantitation
389	MascotQueryPeaks=Include peak list
390	MascotReportTopSelect=Report top [hits]
391	MascotResultDate=Result Date ('YYYY-MM-DD' or 'YYYYMMDD')
392	MascotResultRetrievalParameters=Mascot Result Retrieval Parameters
393	MascotSearchTitle=Search title
394	MascotSearchType=Search type
395	MascotSearchTypeSelect=Search type
396	MascotSearchUserDataInput=Mascot search user data
397	MascotSearchUserData=Mascot search user data
398	MascotSequenceLibrarySelect=Database
399	MascotServerURL=Mascot Server URL
400	MascotShowUnassigned=Show peptide matches not assigned to protein hits
401	MascotSpecies=Taxonomy
402	MascotVariableMods=Variable modifications
403	massEndInKiloDaltons=Mass End (kDa)
404	MassEndInKiloDaltons=Mass End (kDa)
405	massStartInKiloDaltons=Mass Start (kDa)
406	MassStartInKiloDaltons=Mass Start (kDa)
407	MassToChargeRatio = m/z
408	MatchedPeaks=Matched Peaks
409	MatchFeaturesHits=Match features and hits
410	MaxNumMissedCleavages=Max Number of Missed Cleavages
411	Md5=MD5
412	Member=Member
413	Members=Members
414	Message=Message
415	MgfFile=MGF File
416	MicroPlate=Microplate
417	MimeType=MIME Type
418	MinPep=Minimum peptides
419	MissingFile=Missing File
420	Model=Model
421	Modifications=Modifications
422	MoreProjectsMenuItem=more
423	Move=Move
424	MsFile=MS File
425	MsInspect=msInspect
426	MsInspectAdvancedOptions=Advanced options
427	MsInspectFeatureDetection=msInspect Feature Detection
428	MsInspectStrategySelect=Strategy
429	MwInDaltons=Molecular weight (Da)
430	MyFiles=My Files
431	MyProfile=My Profile
432	MyProjects=My Projects
433	MyProtocols=My Protocols
434	MzDataFile=mzData File
435	MzMLFile=mzML File
436	MzTolerance=m/z tolerance
437	m/z=m/z
438	Name=Name
439	NewDirectory=New directory
440	NewGel=New Gel
441	NewGelScanEvent=New Gel Scanning Event
442	NewGroup=New Group
443	NewLabeledExtract=New Labeled Extract
444	NewMascotParameterSetStorage=New Mascot Parameter Set
445	New=New
446	NewNews=New News
447	NewOMSSAParameterSetStorage=New OMSSA Parameter Set
448	NewProject=New Project
449	NewProtocolFileAttachmentNote=not specified (re-open saved protocol to attach a file)
450	NewProtocol=New Protocol
451	NewSample=New Sample
452	NewsDate=Date
453	NewSecondaryExtract=New Secondary Extract
454	NewSecondaryLabeledExtract=New Secondary Labeled Extract
455	NewSeparationEvent=New Separation Event
456	News=News
457	NewStainingEvent=New Staining Event
458	NewUser=New user
459	NewXTandemParameterSetStorage=New X!Tandem Parameter Set
460	NextCreateExportJobs=Next - Create export job[s]
461	NextCreateHitsComparisonReportJob=Next - Create hits comparison report job
462	NextCreateSpectrumFileContactAdderJobs=Next - Create job[s]
463	NextCreateSpectrumFileSampleAdderJobs=Next - Create job[s]
464	NextMascotCreateSearchJobs=Next - Create search job[s]
465	NextMascotEditParametersBeforeCreatingSearchJobs=Next - Edit parameters before search
466	Next=Next
467	NextMsInspectCreateFeatureDetectionJobs=Next - Create feature detection job[s]
468	NextOMSSACreateSearchJobs=Next - Create search job[s]
469	NextOMSSAEditParametersBeforeCreatingSearchJobs=Next - Edit parameters before search
470	NextPIKECreateSearchJobs=Next - Create search job[s]
471	NextSelectHitsComparisonParameters=Next - Select hits comparison parameters
472	NextSelectMascotParameterSetStorage=Next - Select Mascot parameter set
473	NextSelectMascotSearchUserData=Next - Select Mascot Search User Data
474	NextSelectOMSSAParameterSet=Next - Select OMSSA Parameter Set
475	NextSelectPeakListFiles=Next - Select PeakList File[s]
476	NextSelectPrideProtocolFileOptional=Next - Select PRIDE Protocol File (Optional)
477	NextSelectRobotResultFiles=Next - Select Robot Result File[s]
478	NextSelectSearchResultFiles=Next - Select Search Result File[s]
479	NextSelectXTandemParameterSet=Next - Select X!Tandem Parameter Set
480	NextSpectrum=Next spectrum
481	NextStartXTandemSearch=Next - Create search job[s]
482	NextXTandemCreateSearchJobs=Next - Create search job[s]
483	NextXTandemEditParametersBeforeCreatingSearchJobs=Next - Edit parameters before search
484	NoActiveProjectMenuItem=- no active project -
485	NonGelBased=Non gel based
486	no=no
487	No=No
488	NotificationConfiguration=Notification Configuration
489	NotificationConfigurationSaved=Notification configuration saved
490	NotificationMode=Use notification:
491	NotSpecifiedDefaultUsed=Not specified - Default used
492	NotSpecified=Not specified
493	NotSpecifiedRequired=Not specified (*Required)
494	NumberOfEntriesAfterTaxonomy=Number of Entries after Taxonomy
495	NumberOfEntries=Number of Entries
496	NumberOfResidues=Number of Residues
497	OccamsRazor=Occams Razor
498	OMSSAAutoMassAdjust=Automatic mass tolerance adjustment fraction
499	OMSSAConsiderMult=Minimum charge to start using multiply charged products
500	OMSSACutHi=Peak high intensity cutoff (fraction of most intense)
501	OMSSACutInc=Peak intensity cutoff increment (fraction of most intense)
502	OMSSACutLo=Peak low intensity cutoff (fraction of most intense)
503	OMSSACutoff=E-value cutoff
504	OMSSADoubleNum=Number of peaks allowed in double charge window
505	OMSSADoubleWin=Double charge window in Da
506	OMSSAEnzymeSelect=Enzyme
507	OMSSAExactMass=Threshold in Da above which the mass of neutron should be added in exact mass search
508	OMSSAFixedMods=Fixed modifications (ctrl key for multiple selection)
509	OMSSAHitListLen=Hit list max length
510	OMSSAIonsToSearch1=Ions to search 1
511	OMSSAIonsToSearch1Select=Ions to search 1
512	OMSSAIonsToSearch2=Ions to search 2
513	OMSSAIonsToSearch2Select=Ions to search 2
514	OMSSAMaxCharge=Upper bound of precursor charge
515	OMSSAMaxMods=Maximum variable modification combinations searched per peptide
516	OMSSAMaxNoEnzyme=Maximum size of peptides for no-enzyme and semi-tryptic searches (0=none)
517	OMSSAMaxProductCharge=Maximum product charge to search
518	OMSSAMaxProductions=Max number of ions in each series being searched (0=all)
519	OMSSAMinCharge=Lower bound of precursor charge
520	OMSSAMinHit=Minimum number of m/z matches a sequence library peptide must have for the hit to the peptide to be recorded
521	OMSSAMinNoEnzyme=Minimum size of peptides for no-enzyme and semi-tryptic searches
522	OMSSAMinSpectra=Minimum number of m/z values a spectrum must have to be searched
523	OMSSAMissedCleave=Maximum missed cleavages
524	OMSSAMsCalcCharge=How should precursor charges be determined? (1=believe the input file, 2=use a range)
525	OMSSAMsCalcPlusOne=Should charge plus one be determined algorithmically? (1=yes)
526	OMSSAMsMSTol=Product mass tolerance (Da)
527	OMSSANMethionineSelect=N-term methionine should be cleaved
528	OMSSANoCorrelationScore=Turn off correlation correction to score (1=off, 0=use correlation)
529	OMSSA=OMSSA
530	OMSSAParameterFile=OMSSA Parameters File
531	OMSSAParameterSetExtra=OMSSA - Extra (Not used for web search)
532	OMSSAParameterSetGeneral=OMSSA - General
533	OMSSAParameterSet=OMSSA parameter set
534	OMSSAParameterSetsInDatabase=OMSSA parameter sets in database
535	OMSSAParameterSets=OMSSA parameter sets
536	OMSSAParameterSetStorage=OMSSA parameter sets
537	OMSSAParameterSetStorageProperties=OMSSA Parameter Set Storage Properties
538	OMSSAParameterTemplateFile=OMSSA Parameters Template File
539	OMSSAPepTol=Precursor mass tolerance (Da)
540	OMSSAPlusOne=Fraction of product peaks below precursor to determine +1 precursor
541	OMSSAPrecursorCull=Eliminate charge reduced precursors in spectra (0=no, 1=yes)
542	OMSSAPrecursorMassSearchTypeSelect=Precursor ion search type
543	OMSSAProbFollowingIon=Probability of consecutive ion (used in correlation correction)
544	OMSSAProductMassSearchTypeSelect=Product ion search type
545	OMSSAPseudoCount=Minimum number of precursors that match a spectrum
546	OMSSAReplaceThresh=E-value threshold to replace a hit, 0 = only if better
547	OMSSAResearchThresh=E-value threshold to iteratively search a spectrum again, 0 = always
548	OMSSAScale=Scale
549	OMSSASearchB1=Should first forward (b1) product ions be in search (1=no)
550	OMSSASearchCTermProduct=Should C terminus ions be searched (1=no)
551	OMSSASearchSpectrumTypeSelect=Spectrum type for default parameter file
552	OMSSASequenceLibrarySelect=Sequence library
553	OMSSASettingId=Setting id
554	OMSSASingleNum=Number of peaks allowed in single charge window
555	OMSSASingleWin=Single charge window in Da
556	OMSSASpecies=Species to search (ctrl key for multiple selection)
557	OMSSASubsetThresh=E-value threshold to include a sequence in the iterative search, 0 = all
558	OMSSATopHitNum=Number of top intensity peaks in first pass
559	OMSSAVariableMods=Variable modifications (ctrl key for multiple selection)
560	OMSSAZDepSelect=Charge dependency of precursor mass tolerance
561	OnlyThis=Only this
562	OrderBy=Order By
563	Organisation=Organisation
564	Original=Original
565	OriginalQuantityInMicroLiters=Original Quantity (µl)
566	OriginalSampleQuantityInMicroLiters=Original Sample Quantity (µl)
567	OriginalSearchResults=Original search results
568	OtherSettings=Other settings
569	Others=Others
570	OutputDirectoryName=Output directory name
571	OutputFileName=Output file name
572	OutputFileNamePrefix=Output filename prefix (optional)
573	Output=Output
574	Overview=Overview
575	Owner=Owner
576	Own=Own
577	ParameterFile=Parameter File
578	Parameters=Parameters
579	ParentPeakListSet=Parent peaklistset
580	Password=Password
581	PeakListFileName=Peaklist file
582	PeakListFile=Peaklist file
583	PeakListSet=Peak list set
584	PeakListSetsInDatabase=Peak list sets in the database
585	PeakListSets=Peak list sets
586	PeakLists=Peaklists
587	PendingJobs=Pending Jobs
588	Pending=Pending
589	PeptideCutOff=Peptide cutoff
590	PeptideResults=Peptide search results
591	PeptideSequence=Peptide Sequence
592	percentAcrylAmid=Acrylamide (%)
593	PercentAcrylAmid=Acrylamide (%)
594	PercentAcrylamide=Acrylamide (%)
595	PercentAcrylAmide=Acrylamide (%)
596	PercentComplete=Complete (%)
597	PerformMascorSearch=Perform Mascot Search
598	PerformOMSSASearch=Perform OMSSA Search
599	PerformSpectrumSearch=Spectrum Search
600	PerformXTandemSearch=Perform X!Tandem Search
601	PermissionDenied=Permission Denied
602	Permissions=Permissions
603	Personal=Personal
604	Phone=Phone
605	PiEnd=High pI
606	piEnd=High pI boundary
607	PIKEFieldSelect=Fields to show (ctrl key for multiple selection)
608	PIKEGeneOntologyCheckSelect=Include Gene Ontology exhaustive search (Gene Ontology terms must be selected to be shown)
609	PIKEInputFileTypeSelect=Input file type
610	PIKEMaxDeepInput=Level of the Gene Ontology deep graphical representation
611	PIKEOutputFileTypeSelect=Output file type (ctrl key for multiple selection)
612	PIKEParameterSetInput=PIKE - Input
613	PIKEParameterSetOutput=PIKE - Output
614	PIKESourceDatabaseSelect=Source database
615	PIKEUserMailInput=E-mail address
616	PIKEUserNameInput=Your name
617	Pi=Pi
618	PiStart=Low pI
619	piStart=Low pI boundary
620	PKLFile=PKL File
621	PlateExternalId=Plate external ID
622	PlateId=Plate ID
623	Plate=Plate
624	PlateProperties=Plate properties
625	PluginClassPath=Plugin class path
626	PluginConfiguration=Plugin configuration
627	Plugin=Plugin
628	PluginDefinition=Plugin Definition
629	Plugins=Plugins
630	PluginVersion=Plugin version
631	Pooled=Pooled
632	PoolExtracts=Pool Extracts
633	Precursor=Precursor
634	PrecursorQuantity=Precursor quantity
635	PreferencesMenuItem=Preferences...
636	Preferences=Preferences
637	PreviousDimensions=Previous separation dimensions
638	Previous=Previous
639	PreviousSpectrum=Previous spectrum
640	PrideExperimentTitle=Experiment title
641	PrideExportAfterVersionNumber=XML Export
642	PrideExportBtn=PRIDE XML Export
643	PrideExportFilterSettings=PRIDE XML Export - Filter Settings
644	PrideExportOutput=PRIDE XML Export - Output
645	PrideExport=PRIDE XML Export
646	PrimaryCombined=Primary in search combination
647	Priority=Priority
648	Profile=Profile
649	Progress=Progress
650	ProjectDirectory=Project directory
651	ProjectHomeDirectory=Project home directory
652	ProjectId=Project ID
653	Project=Project
654	Projects=Projects
655	ProjectType=Project Type
656	PropertiesFor=Properties for
657	PropertiesForHitsToDelete=Properties for hits to delete
658	Properties=Properties
659	Property=Property
660	ProtCutOff=Protein FDR cutoff
661	ProteinAccession=Protein accession number
662	proteinAssay=Protein Assay
663	ProteinAssay=Protein Assay
664	ProteinAssembly=Protein Assembly
665	Protein=Protein
666	ProteinResults=Protein search results
667	ProtocolFile=Protocol File
668	protocol=Protocol
669	Protocol=Protocol
670	Protocols=Protocols
671	ProtocolType=Protocol Type
672	ProtocolType=Protocol Type
673	PutJobInHighPriorityQueue=Put job in high priority queue
674	Queue=Queue
675	Queues=Queues
676	QuantitationSettings=Settings for isobaric label quantification
677	QuantityInMicroLiters=Quantity (µl)
678	Quantity=Quantity
679	QuickImport=Quick Import
680	QuotaTypeSystemId=Quota type
681	RandomHitsPrefix=Decoy hits prefix
682	ReadOnlyForm=Read-Only Form
683	Read=Read
684	RecentProjects=Recent Projects
685	ReferenceIdx=Index of reference
686	Refresh=Refresh
687	ReleaseDate=Release Date
688	RemainingJobs=Remaining Jobs
689	RemainingQuantityInMicroLiters=Remaining Quantity (µl)
690	Remaining=Remaining
691	RemainingSampleQuantityInMicroLiters=Remaining Sample Quantity (µl)
692	Removed=Removed
693	Reports=Reports
694	ReportTools=Report Tools
695	ResetProtocolFile=Reset Protocol File
696	ResolutionMethod=Resolution Method
697	Resolution=Resolution
698	ResolutionType=Resolution Type
699	Restore=Restore
700	Result=Result
701	ResultFile=Result File
702	RetentionTimeInMinutesDelta=RT delta (min)
703	RetentionTimeInMinutes=Retention time (min)
704	RetrieveProteinInfo=Retrieve protein info
705	RMSError=RMS Error
706	Role=Role
707	Roles=Roles
708	RootDirectory=Root Directory
709	RootHome=Root Home
710	RootMeanSquareError=RMS Error
711	Root=Root
712	RunExtension=Run extension
713	RunImportPlugin=Run import plugin
714	RunPlugin=Run plugin
715	SampleBatch=Sample batch
716	SampleComment=Sample comment
717	SampleConcentrationInGramsPerLiter=Sample concentration (g/l)
718	SampleExternalId=Sample external ID
719	SampleInfo=Sample information
720	SampleMassInGrams=Sample mass (g)
721	SampleName=Sample name
722	SampleNumber=Sample number
723	SampleQuantityInMicroLiters=Sample Quantity (µl)
724	Sample=Sample
725	Samples=Samples
726	SampleState=Sample state
727	SampleVolumeInMilliliters=Sample volume (ml)
728	SaveAndSearchMascot=Save and Search Mascot
729	SaveAndSearchOMSSA=Save and Search OMSSA
730	SaveAndSearchXTandem=Save and Search X!Tandem
731	SaveAndSearchXTandemUsingLocalInstallation=Save and Search X!Tandem using Local Installation
732	SaveAsAndSearchMascot=Save As... and Search Mascot
733	SaveAsAndSearchOMSSA=Save As... and Search OMSSA
734	SaveAsAndSearchXTandem=Save As... and Search X!Tandem
735	SaveAsOMSSAParameterSetStorage=Save OMSSA Parameter Set
736	SaveAs=Save As...
737	SaveAsXTandemParameterSetStorage=Save X!Tandem Parameter Set
738	SaveInFile=Save in File
739	SaveProperties=Save properties
740	Save=Save
741	ScanRate=Scan Rate
742	Score=Score
743	ScoreType=Score Type
744	ScoreTypeSettings=Settings for score type
745	Search=Search
746	SearchDatabases=Search database(s)
747	SearchDate=Searched
748	SearchEngine=Search Engine
749	Searches=Searches
750	SearchModifications=Search Modifications
751	SearchOMSSA=Search OMSSA
752	SearchOMSSAUsingLocalInstallation=Search OMSSA using local installation
753	SearchOMSSAViaWebInterface=Search OMSSA via web interface
754	SearchResults=Search results
755	SearchSetup=Search Setup
756	SearchXTandem=Search X!Tandem
757	SearchXTandemUsingLocalInstallation=Search X!Tandem using local installation
758	SearchXTandemViaWebInterface=Search X!Tandem via web interface
759	SelectFileType=Select File Type
760	SelectLocalSampleId=Select existing local sample ID:
761	SelectMascotParameterSetStorage=Select Mascot Parameter Set
762	SelectMascotParameterTemplateFile=Select File to copy Mascot Parameters from
763	SelectMascotResultRetrievalParameters=Select Mascot result retrieval parameters
764	SelectMascotSearchSpectrumFiles=Mascot Search - Select Spectrum File[s]
765	SelectMethod=Select method
766	SelectMimeType=Select MIME type
767	SelectOMSSAParameterSetStorage=Select OMSSA Parameter Set
768	SelectOMSSAParameterTemplateFile=Select File to copy OMSSA Parameters from
769	SelectOMSSASearchSpectrumFiles=OMSSA Search - Select Spectrum File[s]
770	SelectPIKEParameterSet=Select PIKE Parameter Set
771	SelectPlugin=Select plugin
772	SelectPrideProtocolFile=Select File to copy PRIDE XML protocol block from (Optional)
773	SelectProject=Select project
774	SelectProtocolFile=Select Protocol File
775	SelectSpectrumFile=Select Spectrum File
776	SelectVisibleColumns=Select Visible Columns
777	SelectXTandemParameterSetStorage=Select X!Tandem Parameter Set
778	SelectXTandemParameterTemplateFile=Select File to copy X!Tandem Parameters from
779	SelectXTandemSearchSpectrumFiles=X!Tandem Search - Select Spectrum File[s]
780	SelectXTandemSpectrumFile=Select X!Tandem Spectrum File
781	SeparationEvent=Separation Event
782	SeparationMethod=Separation Method
783	SeparationMethods=Separation Methods
784	SessionAttributes=Session Attributes
785	Sequence=Sequence
786	ServerDescription=Server description
787	ServerInformation=Server Information
788	Server=Server
789	SettingsForExport=Settings for the export
790	SettingsForHitReportFile=Settings for the hit report file
791	SettingsForReport=Settings for the report
792	Settings=Settings
793	Shared=Shared
794	ShareRecursivley=Share recursively
795	Share=Share
796	SharingPermissions=Sharing Permissions
797	ShowGels=Show Gels
798	Show=Show
799	SignalToNoiseRatio=S/N
800	SizeInBytes=Size (bytes)
801	Size=Size
802	sizeXInCentiMeters=X size (cm)
803	SizeXInCentiMeters=X size (cm)
804	sizeYInCentiMeters=Y size (cm)
805	SizeYInCentiMeters=Y size (cm)
806	SlowJobQueue=Slow
807	SmtpHostProteiosConfig=SMTP Host (in proteios.config)
808	SmtpHost=SMTP Host
809	solubilizationBuffer=Solubilization Buffer
810	SolubilizationBuffer=Solubilization Buffer
811	SourceInformation=Source Information
812	Specificity=Specificity
813	SpectrumFileContactInput=Contact - Input
814	SpectrumFileContactOutput=Contact - Output
815	SpectrumFileSampleInput=Sample - Input
816	SpectrumFileSampleOutput=Sample - Output
817	SpectrumFile=Spectrum File
818	SpectrumId2=Spectrum Id
819	SpectrumId3=Spectrum id
820	SpectrumIdOrderNumber2=Spectrum Id (order #)
821	SpectrumIdOrderNumber3=Spectrum id (order #)
822	SpectrumIdOrderNumber=Spectrum ID (order #)
823	SpectrumId=Spectrum ID
824	SpectrumIteration=Spectrum iteration
825	SpectrumMassCutoffHigh=Upper (m/z)
826	SpectrumMassCutoffLow=Lower (m/z)
827	SpectrumMassRangeSelection=Spectrum mass range
828	SpectrumSearchesInDatabase=Spectrum searches in the database
829	SpectrumSearches=Spectrum searches
830	SpectrumSearchs=Spectrum searches
831	SpectrumSearch=Spectrum identification result
832	Spectrum=Spectrum
833	SpectrumStringId=Spectrum ID (string)
834	SpotId=Spot ID
835	Spot=Spot
836	SpotXPixel=SpotXPixel
837	SpotYPixel=SpotYPixel
838	StartDate=Start Date
839	Started=Started
840	StartHere=Start Here
841	StartRetentionTimeInMinutes=Start retention time (min)
842	StartTimeToleranceMinutes=Start retention time tolerance (min)
843	Start=Start
844	StatusMessage=Status Message
845	Status=Status
846	StorageLocation=Storage Location
847	StoredInCompressedFormat=Stored in compressed format
848	Supervisor=Supervisor
849	SystemId=System ID
850	SystemItem=System Item
851	TableOptions=Table Options
852	TablePreferencesConfiguration=Table Preferences Configuration
853	TablePreferencesMode=Use table preferences:
854	TablePreferencesReset=Reset table preferences
855	TheoreticalMolecularMassInDaltons=Theoretical molecular mass (Da)
856	TheoreticalPi=Theoretical pI
857	TimeLoggedInHHMMSS=Time logged in (hh:mm:ss)
858	TimeSinceLastAccessHHMMSS=Time since last access (hh:mm:ss)
859	Title=Title
860	ToAddress=To (address)
861	TotalIntensity=Total Intensity
862	TotalPeaks=Total Peaks
863	Trashcan=Trashcan
864	TrashProject=Delete
865	Trash=Trash
866	TransparentCompression=Transparent compression
867	Type=Type
868	UniformResourceIdentifier=URI
869	UniqueSequences=Unique sequences
870	UnsupportedFileType=Unsupported File Type
871	Update=Update
872	UploadDemoFiles=Upload demo files
873	UploadFile=Upload file
874	URI=URI
875	Url=URL
876	URL=URL
877	UseAsProtocol=Use as protocol
878	UseCombinedFDR=Use combined FDR
879	UsedExtractAvailable=Used extract (available
880	UsedExtract=Used Extract
881	UsedLabeledExtractAvailable=Used labeled extract (available
882	UsedLabeledExtract=Used Labeled Extract
883	UseProteinFDR=Use protein FDR filter
884	UsedQuantityInMicroLiters=Used Quantity (µl)
885	UsedQuantity=Used Quantity (µl)
886	UsedSampleAvailable=Used sample (available
887	UsedSampleQuantityInMicroLiters=Used Sample Quantity (µl)
888	UsedSample=Used Sample
889	Used=Used
890	UseFileAsProtocol=Use file as protocol
891	UseInProject=Use in project
892	UseNotification=Use notification
893	Username=Username
894	Users=Users
895	User=User
896	Use=Use
897	ValidationSettings=Settings for statistical filtering
898	Value=Value
899	Vendor=Vendor
900	VerifyPassword=Verify password
901	VersionIdentifier=Version Identifier
902	VersionString=Version String
903	Version=Version
904	ViewImageFile=View image file
905	ViewOrDownload=View/Download
906	ViewProtocolFile=View Protocol File
907	ViewProtocol=View Protocol
908	ViewTrash=View Trash
909	View=View
910	Warning=Warning
911	WellPosition=Well position
912	Well=Well
913	Wizard=Wizard
914	Write=Write
915	X!TandemParameterSet=X!Tandem parameter set
916	XTandemListPathDefaultParameters=Default parameters
917	XTandemListPathTaxonomyInformation=Taxonomy information
918	XTandemOutputHistogramColumnWidth=Histogram column width
919	XTandemOutputHistograms=Histograms
920	XTandemOutputLogPath=Log path
921	XTandemOutputMaximumValidExpectationValue=Maximum valid expectation value
922	XTandemOutputMessage=Message
923	XTandemOutputOneSequenceCopy=One sequence copy
924	XTandemOutputParameters=Parameters
925	XTandemOutputPathHashing=Path hashing
926	XTandemOutputPath=Path
927	XTandemOutputPerformance=Performance
928	XTandemOutputProteins=Proteins
929	XTandemOutputResults=Results
930	XTandemOutputSequencePath=Sequence path
931	XTandemOutputSequences=Sequences
932	XTandemOutputSortResultsBy=Sort results by
933	XTandemOutputSpectra=Spectra
934	XTandemOutputXslPath=XSL path
935	XTandemParameterFile=X!Tandem Parameters File
936	XTandemParameterSetListPath=List path
937	XTandemParameterSetOutput=Output
938	XTandemParameterSetProtein=Protein
939	XTandemParameterSetRefine=Refine
940	XTandemParameterSetResidue=Residue
941	XTandemParameterSetScoring=Scoring
942	XTandemParameterSetsInDatabase=X!Tandem parameter sets in database
943	XTandemParameterSetSpectrum=Spectrum
944	XTandemParameterSetStandardSettings=Standard Settings
945	XTandemParameterSetStorage=X!Tandem parameter sets
946	XTandemParameterSetStorageProperties=X!Tandem Parameter Set Storage Properties
947	XTandemParameterSets=X!Tandem parameter sets
948	XTandemParameterSet=X!Tandem parameter set
949	XTandemParameterTemplateFile=X!Tandem Parameters Template File
950	XTandemProteinCleavageCTerminalMassChange=Cleavage C-terminal mass change
951	XTandemProteinCleavageNTerminalMassChange=Cleavage N-terminal mass change
952	XTandemProteinCleavageSite=Cleavage site
953	XTandemProteinCleavageSiteEnter=or specify own
954	XTandemProteinCleavageSiteSelect=Select cleavage site
955	XTandemProteinCTerminalResidueModificationMass=C-terminal residue modification mass
956	XTandemProteinHomologManagement=Homolog management
957	XTandemProteinModifiedResidueMassFile=Modified residue mass file
958	XTandemProteinNTerminalResidueModificationMass=N-terminal residue modification mass
959	XTandemProteinTaxonEukaryotes=Taxon - Eukaryotes
960	XTandemProteinTaxonProkaryotes=Taxon - Prokaryotes
961	XTandemProteinTaxon=Taxon
962	XTandemRefineMaximumValidExpectationValue=Maximum valid expectation value
963	XTandemRefineModificationMassEnter=or specify own
964	XTandemRefineModificationMass=Modification mass
965	XTandemRefineModificationMassSelect=Select modification mass
966	XTandemRefinePointMutations=Point mutations
967	XTandemRefinePotentialCTerminusModifications=Potential C-terminus modifications
968	XTandemRefinePotentialModificationMassEnter=or specify own
969	XTandemRefinePotentialModificationMass=Potential modification mass
970	XTandemRefinePotentialModificationMassSelect=Select modification mass
971	XTandemRefinePotentialModificationMotif=Potential modification motif
972	XTandemRefinePotentialNTerminusModifications=Potential N-terminus modifications
973	XTandemRefine=Refine
974	XTandemRefineSequencePath=Sequence path
975	XTandemRefineSpectrumSynthesis=Spectrum synthesis
976	XTandemRefineTicPercent=Tic percent
977	XTandemRefineUnanticipatedCleavage=Unanticipated cleavage
978	XTandemRefineUsePotentialModificationsForFullRefinement=Use potential modifications for full refinement
979	XTandemResidueModificationMassEnter=or specify own
980	XTandemResidueModificationMass=Modification mass
981	XTandemResidueModificationMassSelect=Select modification mass
982	XTandemResiduePotentialModificationMassEnter=or specify own
983	XTandemResiduePotentialModificationMass=Potential modification mass
984	XTandemResiduePotentialModificationMassSelect=Select potential modification mass
985	XTandemResiduePotentialModificationMotif=Potential modification motif
986	XTandemScoringAIons=A ions
987	XTandemScoringAlgorithm=Algorithm
988	XTandemScoringBIons=B ions
989	XTandemScoringCIons=C ions
990	XTandemScoringCyclicPermutation=Cyclic permutation
991	XTandemScoringIncludeReverse=Include reverse
992	XTandemScoringMaxMissedCleavageSites=Maximum missed cleavage sites
993	XTandemScoringMinIonCount=Minimum ion count (set to 1 for "k-score" scoring algorithm)
994	XTandemScoringXIons=X ions
995	XTandemScoringYIons=Y ions
996	XTandemScoringZIons=Z ions
997	X!TandemSearchSetup=X!Tandem Search Setup
998	XTandemSpectrumDynamicRange=Dynamic range
999	XTandemSpectrumFile=X!Tandem Spectrum File
1000	XTandemSpectrumFragmentMassType=Fragment mass type
1001	XTandemSpectrumFragmentMonoisotopicMassError=Fragment monoisotopic mass error
1002	XTandemSpectrumFragmentMonoisotopicMassErrorUnits=Fragment monoisotopic mass error units
1003	XTandemSpectrumMaximumParentCharge=Maximum parent charge
1004	XTandemSpectrumMaximumParentMPlusH=Maximum parent m+h
1005	XTandemSpectrumMinimumFragmentMz=Minimum fragment mz
1006	XTandemSpectrumMinimumParentMPlusH=Minimum parent m+h
1007	XTandemSpectrumMinimumPeaks=Minimum peaks
1008	XTandemSpectrumParentMonoisotopicMassErrorMinus=Parent monoisotopic mass error minus
1009	XTandemSpectrumParentMonoisotopicMassErrorPlus=Parent monoisotopic mass error plus
1010	XTandemSpectrumParentMonoisotopicMassErrorUnits=Parent monoisotopic mass error units
1011	XTandemSpectrumParentMonoisotopicMassIsotopeError=Parent monoisotopic mass isotope error
1012	XTandemSpectrumPath=Spectrum path
1013	XTandemSpectrumSequenceBatchSize=Sequence batch size
1014	XTandemSpectrumThreads=Threads
1015	XTandemSpectrumTotalPeaks=Total peaks
1016	XTandemSpectrumUseNoiseSuppression=Use noise suppression
1017	XTandem=X!Tandem
1018	yes=yes
1019	Yes=Yes
1020	YourSession=Your Session
1021	ZoomedAndOriginalSpectrum=Zoomed and original spectrum
1022	ZoomedSpectrum=Zoomed spectrum

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