Changeset 1916

Timestamp:

Aug 31, 2007, 11:54:00 AM (16 years ago)

Author:

Jari Häkkinen

Message:

Fixed copyrights and also some missing svn properties.

Location:

trunk

Files:

• api/core/build.xml (modified) (view diffs)
• api/core/conf/common-queries.xml (modified) (view diffs)
• api/core/conf/ehcache.xml (modified) (view diffs)
• api/core/conf/extended-properties.xml (modified) (view diffs)
• api/core/conf/hibernate.cfg.xml (modified) (view diffs)
• api/core/conf/mysql-queries.xml (modified) (view diffs)
• api/core/conf/postgres-queries.xml (modified) (view diffs)
• api/core/src/org/proteios/XYCoordinate.java (modified) (view diffs)
• api/core/src/org/proteios/core/AbstractBatcher.java (modified) (view diffs)
• api/core/src/org/proteios/core/AbstractEntityQuery.java (modified) (view diffs)
• api/core/src/org/proteios/core/AbstractQuery.java (modified) (view diffs)
• api/core/src/org/proteios/core/AbstractResultList.java (modified) (view diffs)
• api/core/src/org/proteios/core/AbstractSqlQuery.java (modified) (view diffs)
• api/core/src/org/proteios/core/AbstractUpdateToSchemaVersion.java (modified) (view diffs)
• api/core/src/org/proteios/core/AccessControlled.java (modified) (view diffs)
• api/core/src/org/proteios/core/AccountExpiredException.java (modified) (view diffs)
• api/core/src/org/proteios/core/Acquisition.java (modified) (view diffs)
• api/core/src/org/proteios/core/AlreadyLoggedInException.java (modified) (view diffs)
• api/core/src/org/proteios/core/Annotatable.java (modified) (view diffs)
• api/core/src/org/proteios/core/AnnotatedItem.java (modified) (view diffs)
• api/core/src/org/proteios/core/Annotation.java (modified) (view diffs)
• api/core/src/org/proteios/core/AnnotationBetweenRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/AnnotationInRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/AnnotationRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/AnnotationSet.java (modified) (view diffs)
• api/core/src/org/proteios/core/AnnotationSimpleRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/AnnotationType.java (modified) (view diffs)
• api/core/src/org/proteios/core/Annotator.java (modified) (view diffs)
• api/core/src/org/proteios/core/Application.java (modified) (view diffs)
• api/core/src/org/proteios/core/Base64Coder.java (modified) (view diffs)
• api/core/src/org/proteios/core/BaseException.java (modified) (view diffs)
• api/core/src/org/proteios/core/BasicBatcher.java (modified) (view diffs)
• api/core/src/org/proteios/core/BasicItem.java (modified) (view diffs)
• api/core/src/org/proteios/core/BatchUtil.java (modified) (view diffs)
• api/core/src/org/proteios/core/BatchedPropertyInfo.java (modified) (view diffs)
• api/core/src/org/proteios/core/Batcher.java (modified) (view diffs)
• api/core/src/org/proteios/core/BioMaterial.java (modified) (view diffs)
• api/core/src/org/proteios/core/BioMaterialEvent.java (modified) (view diffs)
• api/core/src/org/proteios/core/BioSource.java (modified) (view diffs)
• api/core/src/org/proteios/core/BooleanParameterType.java (modified) (view diffs)
• api/core/src/org/proteios/core/ChildItem.java (modified) (view diffs)
• api/core/src/org/proteios/core/Client.java (modified) (view diffs)
• api/core/src/org/proteios/core/CommonItem.java (modified) (view diffs)
• api/core/src/org/proteios/core/Config.java (modified) (view diffs)
• api/core/src/org/proteios/core/ConfigurationException.java (modified) (view diffs)
• api/core/src/org/proteios/core/ConnectionClosedException.java (modified) (view diffs)
• api/core/src/org/proteios/core/ContextKey.java (modified) (view diffs)
• api/core/src/org/proteios/core/Controlled.java (modified) (view diffs)
• api/core/src/org/proteios/core/CoreFifthColumn.java (modified) (view diffs)
• api/core/src/org/proteios/core/DataProcessingStep.java (modified) (view diffs)
• api/core/src/org/proteios/core/DataQuery.java (modified) (view diffs)
• api/core/src/org/proteios/core/DataResultIterator.java (modified) (view diffs)
• api/core/src/org/proteios/core/DatabaseException.java (modified) (view diffs)
• api/core/src/org/proteios/core/DateParameterType.java (modified) (view diffs)
• api/core/src/org/proteios/core/DateUtil.java (modified) (view diffs)
• api/core/src/org/proteios/core/DbControl.java (modified) (view diffs)
• api/core/src/org/proteios/core/DetachedItemException.java (modified) (view diffs)
• api/core/src/org/proteios/core/DigestParameter.java (modified) (view diffs)
• api/core/src/org/proteios/core/Directory.java (modified) (view diffs)
• api/core/src/org/proteios/core/DiskConsumable.java (modified) (view diffs)
• api/core/src/org/proteios/core/DiskUsage.java (modified) (view diffs)
• api/core/src/org/proteios/core/DoubleParameterType.java (modified) (view diffs)
• api/core/src/org/proteios/core/DynamicResultIterator.java (modified) (view diffs)
• api/core/src/org/proteios/core/Experiment.java (modified) (view diffs)
• api/core/src/org/proteios/core/ExtendedProperties.java (modified) (view diffs)
• api/core/src/org/proteios/core/ExtendedProperty.java (modified) (view diffs)
• api/core/src/org/proteios/core/ExtendedPropertyAccessor.java (modified) (view diffs)
• api/core/src/org/proteios/core/Extract.java (modified) (view diffs)
• api/core/src/org/proteios/core/File.java (modified) (view diffs)
• api/core/src/org/proteios/core/FileAttachable.java (modified) (view diffs)
• api/core/src/org/proteios/core/FileMap.java (modified) (view diffs)
• api/core/src/org/proteios/core/FileNode.java (modified) (view diffs)
• api/core/src/org/proteios/core/FileParameterType.java (modified) (view diffs)
• api/core/src/org/proteios/core/FileType.java (modified) (view diffs)
• api/core/src/org/proteios/core/FloatParameterType.java (modified) (view diffs)
• api/core/src/org/proteios/core/GelElectrophoresis.java (modified) (view diffs)
• api/core/src/org/proteios/core/GelImageAnalysisEvent.java (modified) (view diffs)
• api/core/src/org/proteios/core/GelScanEvent.java (modified) (view diffs)
• api/core/src/org/proteios/core/GlobalDefaultSetting.java (modified) (view diffs)
• api/core/src/org/proteios/core/Group.java (modified) (view diffs)
• api/core/src/org/proteios/core/GroupPermissions.java (modified) (view diffs)
• api/core/src/org/proteios/core/Hardware.java (modified) (view diffs)
• api/core/src/org/proteios/core/HardwareConfiguration.java (modified) (view diffs)
• api/core/src/org/proteios/core/HardwareType.java (modified) (view diffs)
• api/core/src/org/proteios/core/HibernateUtil.java (modified) (view diffs)
• api/core/src/org/proteios/core/Hit.java (modified) (view diffs)
• api/core/src/org/proteios/core/IPG.java (modified) (view diffs)
• api/core/src/org/proteios/core/Identifiable.java (modified) (view diffs)
• api/core/src/org/proteios/core/Include.java (modified) (view diffs)
• api/core/src/org/proteios/core/Install.java (modified) (view diffs)
• api/core/src/org/proteios/core/InstrumentConfiguration.java (modified) (view diffs)
• api/core/src/org/proteios/core/IntegerParameterType.java (modified) (view diffs)
• api/core/src/org/proteios/core/IntegerUtil.java (modified) (view diffs)
• api/core/src/org/proteios/core/InternalJobQueue.java (modified) (view diffs)
• api/core/src/org/proteios/core/InvalidAnnotationException.java (modified) (view diffs)
• api/core/src/org/proteios/core/InvalidDataException.java (modified) (view diffs)
• api/core/src/org/proteios/core/InvalidPasswordException.java (modified) (view diffs)
• api/core/src/org/proteios/core/InvalidPathException.java (modified) (view diffs)
• api/core/src/org/proteios/core/InvalidUseOfNullException.java (modified) (view diffs)
• api/core/src/org/proteios/core/Item.java (modified) (view diffs)
• api/core/src/org/proteios/core/ItemAlreadyExistsException.java (modified) (view diffs)
• api/core/src/org/proteios/core/ItemContext.java (modified) (view diffs)
• api/core/src/org/proteios/core/ItemFactory.java (modified) (view diffs)
• api/core/src/org/proteios/core/ItemInUseException.java (modified) (view diffs)
• api/core/src/org/proteios/core/ItemKey.java (modified) (view diffs)
• api/core/src/org/proteios/core/ItemModifiedException.java (modified) (view diffs)
• api/core/src/org/proteios/core/ItemNotFoundException.java (modified) (view diffs)
• api/core/src/org/proteios/core/ItemParameterType.java (modified) (view diffs)
• api/core/src/org/proteios/core/ItemQuery.java (modified) (view diffs)
• api/core/src/org/proteios/core/ItemResultIterator.java (modified) (view diffs)
• api/core/src/org/proteios/core/ItemResultList.java (modified) (view diffs)
• api/core/src/org/proteios/core/Job.java (modified) (view diffs)
• api/core/src/org/proteios/core/Key.java (modified) (view diffs)
• api/core/src/org/proteios/core/Keyring.java (modified) (view diffs)
• api/core/src/org/proteios/core/Label.java (modified) (view diffs)
• api/core/src/org/proteios/core/LabeledExtract.java (modified) (view diffs)
• api/core/src/org/proteios/core/Location.java (modified) (view diffs)
• api/core/src/org/proteios/core/LongParameterType.java (modified) (view diffs)
• api/core/src/org/proteios/core/LsidElement.java (modified) (view diffs)
• api/core/src/org/proteios/core/MeasuredArea.java (modified) (view diffs)
• api/core/src/org/proteios/core/MeasuredBioMaterial.java (modified) (view diffs)
• api/core/src/org/proteios/core/Message.java (modified) (view diffs)
• api/core/src/org/proteios/core/Metadata.java (modified) (view diffs)
• api/core/src/org/proteios/core/Method.java (modified) (view diffs)
• api/core/src/org/proteios/core/MimeType.java (modified) (view diffs)
• api/core/src/org/proteios/core/Modification.java (modified) (view diffs)
• api/core/src/org/proteios/core/MultiPermissions.java (modified) (view diffs)
• api/core/src/org/proteios/core/Nameable.java (modified) (view diffs)
• api/core/src/org/proteios/core/NameableUtil.java (modified) (view diffs)
• api/core/src/org/proteios/core/News.java (modified) (view diffs)
• api/core/src/org/proteios/core/NotLoggedInException.java (modified) (view diffs)
• api/core/src/org/proteios/core/NumberOutOfRangeException.java (modified) (view diffs)
• api/core/src/org/proteios/core/Operator.java (modified) (view diffs)
• api/core/src/org/proteios/core/Ownable.java (modified) (view diffs)
• api/core/src/org/proteios/core/OwnableUtil.java (modified) (view diffs)
• api/core/src/org/proteios/core/OwnedItem.java (modified) (view diffs)
• api/core/src/org/proteios/core/ParameterException.java (modified) (view diffs)
• api/core/src/org/proteios/core/ParameterType.java (modified) (view diffs)
• api/core/src/org/proteios/core/ParameterValuesImpl.java (modified) (view diffs)
• api/core/src/org/proteios/core/Path.java (modified) (view diffs)
• api/core/src/org/proteios/core/Peak.java (modified) (view diffs)
• api/core/src/org/proteios/core/PeakBatcher.java (modified) (view diffs)
• api/core/src/org/proteios/core/PeakList.java (modified) (view diffs)
• api/core/src/org/proteios/core/PeakListBatcher.java (modified) (view diffs)
• api/core/src/org/proteios/core/PeakListSet.java (modified) (view diffs)
• api/core/src/org/proteios/core/Permission.java (modified) (view diffs)
• api/core/src/org/proteios/core/PermissionDeniedException.java (modified) (view diffs)
• api/core/src/org/proteios/core/Plate.java (modified) (view diffs)
• api/core/src/org/proteios/core/PlateEvent.java (modified) (view diffs)
• api/core/src/org/proteios/core/PlateEventType.java (modified) (view diffs)
• api/core/src/org/proteios/core/PlateGeometry.java (modified) (view diffs)
• api/core/src/org/proteios/core/PlateMapping.java (modified) (view diffs)
• api/core/src/org/proteios/core/PlateType.java (modified) (view diffs)
• api/core/src/org/proteios/core/PluginConfiguration.java (modified) (view diffs)
• api/core/src/org/proteios/core/PluginConfigurationRequest.java (modified) (view diffs)
• api/core/src/org/proteios/core/PluginDefinition.java (modified) (view diffs)
• api/core/src/org/proteios/core/PluginExecutionRequest.java (modified) (view diffs)
• api/core/src/org/proteios/core/PluginParameter.java (modified) (view diffs)
• api/core/src/org/proteios/core/PluginRequest.java (modified) (view diffs)
• api/core/src/org/proteios/core/PluginResponse.java (modified) (view diffs)
• api/core/src/org/proteios/core/PluginType.java (modified) (view diffs)
• api/core/src/org/proteios/core/PolyPeptide.java (modified) (view diffs)
• api/core/src/org/proteios/core/Precursor.java (modified) (view diffs)
• api/core/src/org/proteios/core/PredefinedQuery.java (modified) (view diffs)
• api/core/src/org/proteios/core/ProgressReporter.java (modified) (view diffs)
• api/core/src/org/proteios/core/Project.java (modified) (view diffs)
• api/core/src/org/proteios/core/ProjectKey.java (modified) (view diffs)
• api/core/src/org/proteios/core/ProjectPermissions.java (modified) (view diffs)
• api/core/src/org/proteios/core/PropertiesFileHandler.java (modified) (view diffs)
• api/core/src/org/proteios/core/PropertyFilter.java (modified) (view diffs)
• api/core/src/org/proteios/core/Protocol.java (modified) (view diffs)
• api/core/src/org/proteios/core/ProtocolType.java (modified) (view diffs)
• api/core/src/org/proteios/core/QueryFactory.java (modified) (view diffs)
• api/core/src/org/proteios/core/QueryRuntimeFilter.java (modified) (view diffs)
• api/core/src/org/proteios/core/QueryRuntimeFilterFactory.java (modified) (view diffs)
• api/core/src/org/proteios/core/QueryRuntimeFilterManager.java (modified) (view diffs)
• api/core/src/org/proteios/core/Quota.java (modified) (view diffs)
• api/core/src/org/proteios/core/QuotaException.java (modified) (view diffs)
• api/core/src/org/proteios/core/QuotaType.java (modified) (view diffs)
• api/core/src/org/proteios/core/RealTable.java (modified) (view diffs)
• api/core/src/org/proteios/core/Removable.java (modified) (view diffs)
• api/core/src/org/proteios/core/RequestInformation.java (modified) (view diffs)
• api/core/src/org/proteios/core/Role.java (modified) (view diffs)
• api/core/src/org/proteios/core/RoleKey.java (modified) (view diffs)
• api/core/src/org/proteios/core/Sample.java (modified) (view diffs)
• api/core/src/org/proteios/core/SchemaVersion.java (modified) (view diffs)
• api/core/src/org/proteios/core/ScrollIterator.java (modified) (view diffs)
• api/core/src/org/proteios/core/SearchDatabase.java (modified) (view diffs)
• api/core/src/org/proteios/core/SearchResult.java (modified) (view diffs)
• api/core/src/org/proteios/core/SeparationEvent.java (modified) (view diffs)
• api/core/src/org/proteios/core/SeparationMethod.java (modified) (view diffs)
• api/core/src/org/proteios/core/Session.java (modified) (view diffs)
• api/core/src/org/proteios/core/SessionControl.java (modified) (view diffs)
• api/core/src/org/proteios/core/Setting.java (modified) (view diffs)
• api/core/src/org/proteios/core/Shareable.java (modified) (view diffs)
• api/core/src/org/proteios/core/ShareableUtil.java (modified) (view diffs)
• api/core/src/org/proteios/core/SharedItem.java (modified) (view diffs)
• api/core/src/org/proteios/core/SimpleJobQueue.java (modified) (view diffs)
• api/core/src/org/proteios/core/Software.java (modified) (view diffs)
• api/core/src/org/proteios/core/SoftwareConfiguration.java (modified) (view diffs)
• api/core/src/org/proteios/core/SoftwareType.java (modified) (view diffs)
• api/core/src/org/proteios/core/SpectrumSearch.java (modified) (view diffs)
• api/core/src/org/proteios/core/StainingEvent.java (modified) (view diffs)
• api/core/src/org/proteios/core/StringParameterType.java (modified) (view diffs)
• api/core/src/org/proteios/core/StringTooLongException.java (modified) (view diffs)
• api/core/src/org/proteios/core/StringUtil.java (modified) (view diffs)
• api/core/src/org/proteios/core/SystemItem.java (modified) (view diffs)
• api/core/src/org/proteios/core/SystemItems.java (modified) (view diffs)
• api/core/src/org/proteios/core/Transactional.java (modified) (view diffs)
• api/core/src/org/proteios/core/Type.java (modified) (view diffs)
• api/core/src/org/proteios/core/Update.java (modified) (view diffs)
• api/core/src/org/proteios/core/UpdateToSchemaVersionInterface.java (modified) (view diffs)
• api/core/src/org/proteios/core/UpdateToSchemaVersionTmpl.java (modified) (view diffs)
• api/core/src/org/proteios/core/UpdatesFactory.java (modified) (view diffs)
• api/core/src/org/proteios/core/User.java (modified) (view diffs)
• api/core/src/org/proteios/core/UserPermissions.java (modified) (view diffs)
• api/core/src/org/proteios/core/Validatable.java (modified) (view diffs)
• api/core/src/org/proteios/core/Values.java (modified) (view diffs)
• api/core/src/org/proteios/core/Well.java (modified) (view diffs)
• api/core/src/org/proteios/core/authentication/AuthenticationException.java (modified) (view diffs)
• api/core/src/org/proteios/core/authentication/AuthenticationInformation.java (modified) (view diffs)
• api/core/src/org/proteios/core/authentication/Authenticator.java (modified) (view diffs)
• api/core/src/org/proteios/core/authentication/InvalidPasswordException.java (modified) (view diffs)
• api/core/src/org/proteios/core/authentication/POP3Authenticator.java (modified) (view diffs)
• api/core/src/org/proteios/core/authentication/SimpleAuthenticator.java (modified) (view diffs)
• api/core/src/org/proteios/core/authentication/UnknownLoginException.java (modified) (view diffs)
• api/core/src/org/proteios/core/authentication/package.html (modified) (view diffs)
• api/core/src/org/proteios/core/data/AcquisitionData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/AnnotatableData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/AnnotatedData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/AnnotationData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/AnnotationSetData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/AnnotationTypeData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/BasicData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/BatchableData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/BioMaterialData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/BioMaterialEventData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/BioSourceData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/BooleanParameterValueData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ClientData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ClientDefaultSettingData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/CommonData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ContextData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ContextIndex.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/DataProcessingStepData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/DateParameterValueData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/DirectoryData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/DiskConsumableData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/DiskUsageData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/DoubleParameterValueData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ExperimentData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ExtendableData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ExtractData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/FileAttachableData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/FileData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/FileMapData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/FileParameterValueData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/FileTypeData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/FloatParameterValueData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/GelElectrophoresisData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/GelImageAnalysisEventData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/GelScanEventData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/GlobalDefaultSettingData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/GroupData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/GuiContextData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/HardwareConfigurationData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/HardwareData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/HardwareTypeData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/HitData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/IPGData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/IdentifiableData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/InstrumentConfigurationData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/IntegerParameterValueData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ItemKeyData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ItemParameterValueData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/JobData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/KeyData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/LabelData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/LabeledExtractData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/LongParameterValueData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/MappingCoordinate.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/MeasuredAreaData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/MeasuredBioMaterialData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/MessageData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/MimeTypeData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ModificationData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/NameableData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/NewsData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/OwnableData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/OwnedData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ParameterValueData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PasswordData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PeakData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PeakListData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PeakListSetData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PlateCoordinate.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PlateData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PlateEventData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PlateEventTypeData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PlateGeometryData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PlateMappingData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PlateTypeData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PluginConfigurationData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PluginDefinitionData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PluginTypeData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PolyPeptideData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PrecursorData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ProjectData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ProjectKeyData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/PropertyFilterData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ProtocolData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ProtocolTypeData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/QuotaData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/QuotaIndex.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/QuotaTypeData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/RemovableData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/RoleData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/RoleKeyData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SampleData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SchemaVersionData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SeparationEventData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SeparationMethodData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SessionData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SettingData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/ShareableData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SharedData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SoftwareConfigurationData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SoftwareData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SoftwareTypeData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SpectrumSearchData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/StainingEventData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/StringParameterValueData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/SystemData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/TextParameterValueData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/UsedQuantity.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/UserClientSettingData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/UserData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/UserDefaultSettingData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/WellData.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/hibernate-properties-BioMaterialEventData.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/hibernate-properties-MeasuredBioMaterialData.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/hibernate-properties-PlateMappingData.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/GroupGroups.hbm.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/GroupGroups.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/GroupKeys.hbm.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/GroupKeys.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/GroupProjects.hbm.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/GroupProjects.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/KeyPermission.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/ProjectKeys.hbm.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/ProjectKeys.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/ProjectPermission.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/RoleKeys.hbm.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/RoleKeys.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/UserGroups.hbm.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/UserGroups.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/UserKeys.hbm.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/UserKeys.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/UserProjects.hbm.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/UserProjects.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/UserRoles.hbm.xml (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/UserRoles.java (modified) (view diffs)
• api/core/src/org/proteios/core/data/keyring/package.html (modified) (view diffs)
• api/core/src/org/proteios/core/data/package.html (modified) (view diffs)
• api/core/src/org/proteios/core/dtd/extended-properties.dtd (modified) (view diffs)
• api/core/src/org/proteios/core/dtd/predefined-queries.dtd (modified) (view diffs)
• api/core/src/org/proteios/core/dtd/raw-data-types.dtd (modified) (view diffs)
• api/core/src/org/proteios/core/filter-def.hbm.xml (modified) (view diffs)
• api/core/src/org/proteios/core/package.html (modified) (view diffs)
• api/core/src/org/proteios/core/plugin/About.java (modified) (view diffs)
• api/core/src/org/proteios/core/plugin/AboutImpl.java (modified) (view diffs)
• api/core/src/org/proteios/core/plugin/AbstractPlugin.java (modified) (view diffs)
• api/core/src/org/proteios/core/plugin/AutoDetectingImporter.java (modified) (view diffs)
• api/core/src/org/proteios/core/plugin/GuiContext.java (modified) (view diffs)
• api/core/src/org/proteios/core/plugin/InteractivePlugin.java (modified) (view diffs)
• api/core/src/org/proteios/core/plugin/ParameterValues.java (modified) (view diffs)
• api/core/src/org/proteios/core/plugin/Plugin.java (modified) (view diffs)
• api/core/src/org/proteios/core/plugin/Request.java (modified) (view diffs)
• api/core/src/org/proteios/core/plugin/Response.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/AddExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Aggregations.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/AndRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Annotations.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/AscOrder.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/BetweenRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/CountExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/DescOrder.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/DivideExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/EntityQuery.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/EqRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Expression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/ExpressionSelect.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Expressions.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/FloatExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/GtRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/GteqRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Hql.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/HqlElementsExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/HqlEntityExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/HqlIndexExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/HqlInnerJoin.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/HqlLeftJoin.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/HqlPropertyExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/HqlQuery.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/HqlRightJoin.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/InRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/IntegerExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Join.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/JoinType.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/LikeRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/LogExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/LtRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/LteqRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/MaxExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/MeanExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/MinExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/MultiplyExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/NegateExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/NeqRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/NotRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/OrRestriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Order.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Orders.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/ParameterExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Query.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/QueryElement.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/QueryResult.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/QueryType.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Restriction.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Restrictions.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/ResultIterator.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/ResultList.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Select.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/SelectedExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/Selects.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/SqlQuery.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/SqlResult.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/SqlResultIterator.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/SqlResultList.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/SqrtExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/SubtractExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/SumExpression.java (modified) (view diffs)
• api/core/src/org/proteios/core/query/package.html (modified) (view diffs)
• api/core/src/org/proteios/install/InitDB.java (modified) (view diffs)
• api/core/src/org/proteios/install/Input2File.java (modified) (view diffs)
• api/core/src/org/proteios/install/MaskingThread.java (modified) (view diffs)
• api/core/src/org/proteios/install/PasswordField.java (modified) (view diffs)
• api/core/src/org/proteios/install/Replace.java (modified) (view diffs)
• api/core/src/org/proteios/install/Webclient.java (modified) (view diffs)
• api/core/src/org/proteios/io/AHit.java (modified) (view diffs)
• api/core/src/org/proteios/io/FileTypeInterface.java (modified) (view diffs)
• api/core/src/org/proteios/io/FileValidationInterface.java (modified) (view diffs)
• api/core/src/org/proteios/io/FilenameParseUtil.java (modified) (view diffs)
• api/core/src/org/proteios/io/HitInterface.java (modified) (view diffs)
• api/core/src/org/proteios/io/IdentificationFileInterface.java (modified) (view diffs)
• api/core/src/org/proteios/io/MascotFileReader.java (modified) (view diffs)
• api/core/src/org/proteios/io/PeakListFileImpl.java (modified) (view diffs)
• api/core/src/org/proteios/io/PeakListFileInterface.java (modified) (view diffs)
• api/core/src/org/proteios/io/PickFileInterface.java (modified) (view diffs)
• api/core/src/org/proteios/io/RobotFileImpl.java (modified) (view diffs)
• api/core/src/org/proteios/io/RobotFileInterface.java (modified) (view diffs)
• api/core/src/org/proteios/io/SpectrumImpl.java (modified) (view diffs)
• api/core/src/org/proteios/io/SpectrumInterface.java (modified) (view diffs)
• api/core/src/org/proteios/io/Tag.java (modified) (view diffs)
• api/core/src/org/proteios/io/TagFactory.java (modified) (view diffs)
• api/core/src/org/proteios/io/TandemFactory.java (modified) (view diffs)
• api/core/src/org/proteios/io/TandemFileReader.java (modified) (view diffs)
• api/core/src/org/proteios/io/XMLReaderUtil.java (modified) (view diffs)
• api/core/src/org/proteios/method/MethodException.java (modified) (view diffs)
• api/core/src/org/proteios/method/write/SaveUserRolesMethod.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/MzDataExportPlugin.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/MzDataImportPlugin.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/Base64Util.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/CvLookup.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/CvParam.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpAcqSpecificationBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpAcquisitionBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpActivationBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpAdminBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpAnalyzerBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpAnalyzerListBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpCommon.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpCommonAnnotation.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpCommonDc.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpCommonPeakList.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpCommonPeakListSet.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpContactBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpDataBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpDataProcessingBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpDescriptionBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpDetectorBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpInstrumentBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpInstrumentNameBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpIntenArrayBinaryBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpIonSelectionBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpMzArrayBinaryBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpMzDataBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpPrecursorBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpPrecursorListBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpProcessingMethodBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpSampleNameBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpSoftwareBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpSourceBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpSourceFileBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpSpectrumBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpSpectrumDescBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpSpectrumInstrumentBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpSpectrumListBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExpSpectrumSettingsBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataExporter.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpAcqSpecificationBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpAcquisitionBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpActivationBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpAdminBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpAnalyzerBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpAnalyzerListBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpCommon.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpCommonAnnotation.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpCommonDc.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpCommonPeakList.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpCommonPeakListSet.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpContactBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpDataBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpDataProcessingBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpDescriptionBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpDetectorBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpInstrumentBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpInstrumentNameBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpInstrumentSourceBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpIntenArrayBinaryBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpIonSelectionBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpMzArrayBinaryBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpMzDataBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpPrecursorBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpPrecursorListBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpProcessingMethodBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpSampleNameBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpSoftwareBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpSourceFileBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpSpectrumBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpSpectrumDescBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpSpectrumInstrumentBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpSpectrumListBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImpSpectrumSettingsBlock.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImportTest.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/MzDataImporter.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/UserParam.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/XMLCrudeWriter.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/XMLCrudeWriter2.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/XMLCrudeWriter2Impl.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/XMLCrudeWriterImpl.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/XMLExportUtil.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/XMLImportUtil.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/XMLValidator.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/XMLValidatorErrorHandler.java (modified) (view diffs)
• api/core/src/org/proteios/plugins/mzdata/io/XMLValidatorLazyErrorHandler.java (modified) (view diffs)
• api/core/src/org/proteios/util/ArrayIterator.java (modified) (view diffs)
• api/core/src/org/proteios/util/AutoDetectFileFormat.java (modified) (view diffs)
• api/core/src/org/proteios/util/ChainedProgressReporter.java (modified) (view diffs)
• api/core/src/org/proteios/util/ClassLocal.java (modified) (view diffs)
• api/core/src/org/proteios/util/ClassUtil.java (modified) (view diffs)
• api/core/src/org/proteios/util/ConsoleProgressReporter.java (modified) (view diffs)
• api/core/src/org/proteios/util/Coordinate.java (modified) (view diffs)
• api/core/src/org/proteios/util/Diff3.java (modified) (view diffs)
• api/core/src/org/proteios/util/Enumeration.java (modified) (view diffs)
• api/core/src/org/proteios/util/FileUtil.java (modified) (view diffs)
• api/core/src/org/proteios/util/FlatFileParser.java (modified) (view diffs)
• api/core/src/org/proteios/util/JarClassLoader.java (modified) (view diffs)
• api/core/src/org/proteios/util/MD5.java (modified) (view diffs)
• api/core/src/org/proteios/util/RemovableUtil.java (modified) (view diffs)
• api/core/src/org/proteios/util/SchemaFactory.java (modified) (view diffs)
• api/core/src/org/proteios/util/ShareableUtil.java (modified) (view diffs)
• api/core/src/org/proteios/util/ToStringComparator.java (modified) (view diffs)
• api/core/src/org/proteios/util/Tree.java (modified) (view diffs)
• api/core/src/org/proteios/util/XMLUtil.java (modified) (view diffs)
• api/core/src/org/proteios/util/XsdToTagFactory.java (modified) (view diffs)
• api/core/src/org/proteios/util/jep/ChannelFunction.java (modified) (view diffs)
• api/core/src/org/proteios/util/jep/Jep.java (modified) (view diffs)
• api/core/src/org/proteios/util/jep/JepExpressionFunction.java (modified) (view diffs)
• api/core/src/org/proteios/util/jep/JepFunction.java (modified) (view diffs)
• api/core/src/org/proteios/util/jep/Log2Function.java (modified) (view diffs)
• api/core/src/org/proteios/util/jep/MeanFunction.java (modified) (view diffs)
• api/core/src/org/proteios/util/package.html (modified) (view diffs)
• api/core/src/org/proteios/util/plot/HistogramPlot.java (modified) (view diffs)
• api/core/src/org/proteios/util/plot/ScatterPlot.java (modified) (view diffs)
• api/core/test/build.xml (modified) (view diffs)
• api/core/test/src/org/proteios/PropertiesFile.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestAcquisition.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestDataProcessingStep.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestFile.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestGelElectrophoresis.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestGelImageAnalysisEvent.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestGelScanEvent.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestHardwareConfiguration.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestIPG.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestInstrumentConfiguration.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestMessageFactoryCreation.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestPeak.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestPeakList.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestPeakListSet.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestPeakListSetG.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestPrecursor.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestSeparationEvent.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestSeparationMethod.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestSoftwareConfiguration.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/TestStainingEvent.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/data/TestAcquisitionData.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/data/TestDataProcessingStepData.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/data/TestFileData.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/data/TestHardwareConfigurationData.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/data/TestInstrumentConfigurationData.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/data/TestPeakData.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/data/TestPeakListData.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/data/TestPeakListSetData.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/data/TestPrecursorData.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/data/TestSoftwareConfigurationData.java (modified) (view diffs)
• api/core/test/src/org/proteios/core/data/TestSpectrumSearchData.java (modified) (view diffs)
• api/core/test/src/org/proteios/io/TestFilenameParseUtil.java (modified) (view diffs)
• api/core/test/src/org/proteios/io/TestPeakListFileImpl.java (modified) (view diffs)
• api/core/test/src/org/proteios/io/TestRobotFileImpl.java (modified) (view diffs)
• api/core/test/src/org/proteios/io/TestXMLReadUtil.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/ApplicationTestSetup.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/MzDataImpTestSetup.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestMzDataExportPlugin.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestMzDataExporter.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestMzDataExporterOnly.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestMzDataImporter.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestMzDataImporter_Acquisition.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestMzDataImporter_DataProcessingStep.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestMzDataImporter_NonImport.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestMzDataImporter_Peak.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestMzDataImporter_PeakList.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestMzDataImporter_PeakListSet.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestMzDataImporter_Precursor.java (modified) (view diffs)
• api/core/test/src/org/proteios/plugins/mzdata/TestXMLValidator.java (modified) (view diffs)
• api/core/test/src/test.properties.in (modified) (view diffs)
• api/waf/build.xml (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/AbstractAction.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/ActionException.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/ActionFactoryInterface.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/ActionServlet.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/Event.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/EventException.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/HtmlTagWriter.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/Layout.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/LayoutException.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/LoginRequiredException.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/PermissionController.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/PermissionDenied.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/TagWriter.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/TemplateException.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/TextTagWriter.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/constraints/InvalidAttributeException.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/constraints/InvalidParameterValue.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/constraints/ParameterValidator.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/constraints/VAttr.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/constraints/VBoolean.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/constraints/VDate.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/constraints/VFloat.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/constraints/VInteger.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/constraints/VParameter.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/constraints/VString.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/constraints/package.html (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/A.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Attribute.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Body.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/CData.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Dd.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Div.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Dl.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Dt.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Fieldset.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Form.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Frame.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/FrameSet.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/H1.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/H2.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/H3.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Head.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Hr.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Html.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Img.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Label.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Legend.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Li.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Link.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Option.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Script.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Select.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Span.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Style.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Table.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Tag.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Td.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Textarea.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Th.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Title.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Tr.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/Ul.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/dom/html/package.html (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/package.html (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/util/RequestUtil.java (modified) (view diffs)
• api/waf/src/se/lu/thep/waf/util/Values.java (modified) (view diffs)
• api/waf/test/build.xml (modified) (view diffs)
• build.xml (modified) (view diffs)
• client/ftpd/build.xml (modified) (view diffs)
• client/ftpd/conf/ftp.properties.in (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/FTPServerStart.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/DataInputStreamWithReadLine.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/DatabaseFile.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/ExtractZipFile.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/FileWithCopy.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/GUIMethods.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/HostInfo.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/JFolderChooser.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/MyGregorianCalendar.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/MyHashTable.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/MyInteger.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/MyString.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/MyWindow.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/StreamIO.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/common/UnescapeMethods.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/DatabaseFileFilter.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/FTPDataConnection.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/FTPMessages.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/FTPNewConnection.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/FTPServer.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/FTPServerController.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/FTPSettings.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/FTPSetup.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/FTPSetupConnection.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/FileAccess.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/MyHashTableWithPaths.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/MyLS.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/ShowFTPSetupPages.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/UserData.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/UserDatabase.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/ftp_server/ValidateInput.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/ChunkedDataOutputStream.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/ClassChooser.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/ComparatorIgnoreCase.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/ExtractZipFileInstall.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/HitStatistic.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/InstallXerver.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/JTextFieldInt.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/MenuOptions.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/MinimizedMode.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/MyFile.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/NewConnection.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/PathInfo.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/ProgramWindow.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/ReadInputStream.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/ReadInputStreamSTDERR.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/ReadInputStreamSTDIN.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/ReadInputStreamSTDOUT.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/RunKiller.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/RunScript.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/SetupNewConnection.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/SetupWindow.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/SetupXerver.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/SetupXerverKernel.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/ShowSetupPages.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/Start.java (modified) (view diffs)
• client/ftpd/src/se/lu/thep/coreftpd/webserver/XerverKernel.java (modified) (view diffs)
• client/ftpd/start_proteios_ftp_server.bat.in (modified) (view diffs)
• client/ftpd/start_proteios_ftp_server.sh (modified) (view diffs)
• client/servlet/build.xml (modified) (view diffs)
• client/servlet/conf/log4j.properties.in (modified) (view diffs)
• client/servlet/conf/proteios.config.in (modified) (view diffs)
• client/servlet/conf/web.xml (modified) (view diffs)
• client/servlet/conf/web.xml.in (modified) (view diffs)
• client/servlet/src/locale/en/dictionary (modified) (view diffs)
• client/servlet/src/locale/en/exception.messages (modified) (view diffs)
• client/servlet/src/org/proteios/ActionLink.java (modified) (view diffs)
• client/servlet/src/org/proteios/Context.java (modified) (view diffs)
• client/servlet/src/org/proteios/ContextEnabled.java (modified) (view diffs)
• client/servlet/src/org/proteios/ContextLink.java (modified) (view diffs)
• client/servlet/src/org/proteios/CrossLink.java (modified) (view diffs)
• client/servlet/src/org/proteios/FileContext.java (modified) (view diffs)
• client/servlet/src/org/proteios/FileLocator.java (modified) (view diffs)
• client/servlet/src/org/proteios/Localizer.java (modified) (view diffs)
• client/servlet/src/org/proteios/MenuContext.java (modified) (view diffs)
• client/servlet/src/org/proteios/MenuFactory.java (modified) (view diffs)
• client/servlet/src/org/proteios/PopupLink.java (modified) (view diffs)
• client/servlet/src/org/proteios/Registry.java (modified) (view diffs)
• client/servlet/src/org/proteios/RoleController.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/ActionFactory.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/Loader.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/ProteiosAction.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/SetFilter1.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/SetFilter2.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/SetSortColumn.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/directory/AddDirectory.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/directory/NewDirectory.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/directory/SaveDirectory.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/directory/ViewActiveDirectory.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/directory/ViewDirectory.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/execute/Init.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/execute/Login.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/execute/Logout.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/execute/ProjectToolbar.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/execute/ShareToProject.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/execute/ViewLoginForm.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/extract/AddExtract.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/extract/NewExtract.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/extract/SaveExtract.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/extract/ViewActiveExtract.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/extract/ViewExtract.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/file/GenericFormTest.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/file/GenericFormTestSheet.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/file/ListFilePlugins.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/file/MoveFile1.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/file/MoveFile2.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/file/NewFile.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/file/SaveFile.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/file/SelectFile.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/file/ShowFile.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/file/ViewActiveFile.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/file/ViewFile.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/gel/AddGel.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/gel/ListGels.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/gel/NewGel.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/gel/SaveGel.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/gel/ViewActiveGel.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/gel/ViewGel.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/gel/ViewGelOrNewGel.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/AddHit.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/AddPlate.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/AddPlateDone.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ClearHits.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/CombineHits.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/CombineHitsStep1.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/CombineHitsStep2.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/GenerateHits.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ImportHits.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ImportHitsStep1.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ImportHitsStep2.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ImportHitsWizard.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ImportHitsWizardStep1a.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ImportHitsWizardStep1b.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ImportHitsWizardStep2a.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ImportHitsWizardStep2b.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ImportHitsWizardStep3a.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ImportHitsWizardStep3b.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ListHits.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/NewHit.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/SaveInFileHitsStep1.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/SaveInFileHitsStep2.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/SequentialImport.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ViewActiveHit.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ViewActiveHitExternalId.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ViewActiveHitSpectrum.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ViewHit.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ViewHitExternalId.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/hit/ViewHitSpectrum.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/job/ListJobs.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/job/ViewActiveJob.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/job/ViewJob.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/news/EditActiveNews.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/news/EditNews.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/news/ListNews.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/news/NewNews.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/package.html (modified) (view diffs)
• client/servlet/src/org/proteios/action/peakList/PlotHitSpectrum.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/peakList/PlotSpectrum.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/peakList/ViewActivePeakList.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/peakList/ViewPeakList.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/peakListSet/CreateFileExportJob.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/peakListSet/DeletePeakListSet.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/peakListSet/ExportPeakListSet.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/peakListSet/ListPeakListSet.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/peakListSet/SavePeakListSet.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/peakListSet/ViewActivePeakListSet.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/peakListSet/ViewPeakListSet.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/plugin/AddPlugin.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/plugin/CreateFileImportJob.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/plugin/CreateProjectPluginJob.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/plugin/InstallPluginsFromExtension.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/plugin/ListPluginDefinitions.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/plugin/NewPlugin.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/plugin/ViewActivePluginDefinition.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/plugin/ViewPluginDefinition.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/AddProject.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/ClearOrganizedFiles.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/CreateLargeProject.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/ListMyProjects.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/ListProjectPlugins.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/ListSamplesInProject.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/NewProject.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/SaveFileConnection.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/SaveProject.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/UploadDemoFiles.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/ViewActiveProject.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/project/ViewProjectHome.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/read/PermissionDeniedView.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/read/ScrollTo.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/read/ViewAbout.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/read/ViewFrames.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/read/ViewHelp.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/read/ViewHome.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/read/ViewInfo.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/read/ViewLeft.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/role/ListRoles.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/role/SaveRole.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/role/ViewActiveRole.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/role/ViewRole.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/sample/AddSample.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/sample/ListSamples.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/sample/NewSample.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/sample/SaveSample.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/sample/ViewActiveSample.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/sample/ViewSample.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/AddUser.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/ChangeMyPassword.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/ChangeUserPassword.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/CreateDemoUser.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/ListUsers.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/NewUser.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/SaveMyProfileProperties.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/SaveUserProperties.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/SaveUserRoles.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/ViewActiveUser.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/ViewMyProfileAction.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/user/ViewUser.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/write/AddAnnotation.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/write/AddMzDataImportJob.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/write/ConfirmAction.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/write/DeleteItems.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/write/DeleteProject.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/write/DropUser.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/write/EmptyTrash.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/write/ImportPeakListSet.java (modified) (view diffs)
• client/servlet/src/org/proteios/action/write/SaveItemFromGenericForm.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/AbstractGUIConverter.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/ButtonSet.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/ColumnContainer.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/ColumnFactory.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/Error.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/GUIElement.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/GUIFactory.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/GUIParameterValidator.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/Image.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/ListItem.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/Listing.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/Menu.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/Message.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/Node.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/RowContainer.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/Scroller.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/SwitchBar.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/Tab.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/TabSet.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/Title.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/TitledWindow.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/Toolbar.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/Checkbox.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/Field.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/Fieldset.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/FileField.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/Form.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/FormFactory.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/FormTemplateImpl.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/FormTemplateInterface.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/FormUtil.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/Option.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/PasswordField.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/Select.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/Separator.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/Template.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/TextArea.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/form/TextField.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/layout/FrameLayout.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/layout/LayoutFactory.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/layout/RowLayout.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/Cell.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/Column.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/FolderTable.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/Row.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/Table.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/TableFactory.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/TreeRow.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/cols/CreatedColumn.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/cols/DefaultColumnList.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/cols/EntryDateColumn.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/cols/EventCommentColumn.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/cols/EventTypeColumn.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/cols/ExternalIdColumn.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/cols/IdColumn.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/cols/NameColumn.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/cols/OriginalQuantityColumn.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/table/cols/StatusColumn.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/web/GUIConverter.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/web/HtmlFactory.java (modified) (view diffs)
• client/servlet/src/org/proteios/gui/web/LayoutConverter.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/AbstractReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/AnnotationTypeNameReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/AnnotationValueReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/AttributeReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/EntryDateReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/EventCommentReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/EventTypeReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/ExternalIdReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/FileTypeNameReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/IdReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/IdentificationResultFileNameReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/JobStatusReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/NameReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/OriginalQuantityReader.java (modified) (view diffs)
• client/servlet/src/org/proteios/props/PeakListFileNameReader.java (modified) (view diffs)
• client/servlet/test/build.xml (modified) (view diffs)
• client/servlet/test/src/org/proteios/FileLocatorTest.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/PropertiesFile2.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/Login.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/read/TestListMyProjects.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/read/TestListSample.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/read/TestListSampleLoad.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/read/TestListUsers.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/read/TestNewProject.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/read/TestViewSample.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/write/TestAddSampleAnnotation.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/write/TestDeleteSample.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/write/TestSaveProject.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/write/TestSaveSample.java (modified) (view diffs)
• client/servlet/test/src/org/proteios/action/write/TestSaveUser.java (modified) (view diffs)
• client/servlet/test/src/test.properties (modified) (view diffs)
• client/servlet/test/src/test.properties.in (modified) (view diffs)
• client/servlet/www/denied.jsp (modified) (view diffs)
• client/servlet/www/denied403.jsp (modified) (view diffs)
• client/servlet/www/exception.jsp (modified) (view diffs)
• client/servlet/www/header.jspf (modified) (view diffs)
• client/servlet/www/index.jsp (modified) (view diffs)
• client/servlet/www/missing_parameters.jsp (modified) (view diffs)
• client/servlet/www/system_error.jsp (modified) (view diffs)
• credits.txt (modified) (view diffs)
• doc/readme.txt (modified) (view diffs)
• misc/MyPlugin/src/org/proteios/plugins/MyPlugin.java (modified) (view diffs)
• misc/eclipse/code_templates.xml (modified) (view diffs)
• misc/install/initdb.bat (modified) (view diffs)
• misc/install/inp2var.bat (modified) (view diffs)
• misc/install/install-linux.sh (modified) (view diffs)
• misc/install/install-win.bat (modified) (view diffs)
• misc/install/set_classpath.bat (modified) (view diffs)
• misc/install/set_classpath.sh (modified) (view diffs)
• misc/install/updatedb.bat (modified) (view diffs)
• misc/install/updatedb.sh (modified) (view diffs)
• misc/sql/createdb.postgres.sql (modified) (view diffs)
• plugin/build.xml (modified) (view diffs)
• plugin/src/org/proteios/plugins/AbstractFlatFileImporter.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/CombinedHitsReport.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/FileOrganizerPlugin.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/GelSpotPlatePosToHitPlugin.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/LowessNormalization.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/MedianRatioNormalization.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/MsInspectDetailsImporter.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/MsInspectPairFinder.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/PeakListToHitPlugin.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/PiumsMatcherImportPlugin.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/PiumsPepfilImportPlugin.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/PklExportPlugin.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/PklImportPlugin.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/PklToMzDataPlugin.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/PlateFlatFileImporter.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/PlateIdDirectoryCreatorPlugin.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/PlgsToMzDataPlugin.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/RobotFileImportTest.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/SearchResultsImporter.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/TandemImportPlugin.java (modified) (view diffs)
• plugin/src/org/proteios/plugins/TargetIdDirectoryCreatorPlugin.java (modified) (view diffs)
• plugin/test/build.xml (modified) (view diffs)
• plugin/test/src/org/proteios/PropertiesFile3.java (modified) (view diffs)
• plugin/test/src/org/proteios/plugins/ApplicationTestSetup.java (modified) (view diffs)
• plugin/test/src/org/proteios/plugins/TestRobotFileImportTest.java (modified) (view diffs)
• plugin/test/src/test.properties.in (modified) (view diffs)