Changeset 4526

Timestamp:

Oct 23, 2013, 11:52:17 AM (9 years ago)

Author:

olle

Message:

Refs #805. Retraction of writing URL of files instead of local path for http-accessible files, that was added in changeset ​[4515], as the ProteomeXchange submission tool does not currently support this.

1. Class/file plugins/ProteomeXchangeExportPlugin.java in plugin updated in private method void writeProteomeXchangeFme(FileCrudeWriter fileCrudeWriter, int index, String fileType, File file, String fileMapping) to not write URL of files instead of local path for http-accessible files.

File:

• trunk/plugin/src/org/proteios/plugins/ProteomeXchangeExportPlugin.java (modified) (1 diff)

trunk/plugin/src/org/proteios/plugins/ProteomeXchangeExportPlugin.java

@@ -1120 +1120 @@
       filePath = file.getPath().toString();
     }
-    if (file.getUniformResourceIdentifier()!=null && file.getUniformResourceIdentifier().startsWith("http://"))
-    {
-      filePath = file.getUniformResourceIdentifier();
-    }
     //fileCrudeWriter.writeLine("FMH\tfile_id\tfile_type\tfile_path\tfile_mapping");
     fileCrudeWriter.writeLine("FME\t" + index + "\t" + fileType + "\t" + filePath + "\t" + fileMapping);