Changeset 4555

Timestamp:

May 9, 2014, 3:08:25 PM (9 years ago)

Author:

Fredrik Levander

Message:

 

Location:

trunk

Files:

• api/core/src/org/proteios/core/FileType.java (modified) (1 diff)
• api/core/src/org/proteios/core/Install.java (modified) (1 diff)
• plugin/conf/xsd/mzIdentML1.1.0.xsd (added)
• plugin/src/org/proteios/plugins/MzIdentMLImportPlugin.java (added)
• plugin/src/org/proteios/plugins/SearchResultsImporter.java (modified) (2 diffs)

trunk/api/core/src/org/proteios/core/FileType.java

@@ -102 +102 @@
   public static final String MSINSPECT_FEATURES = "org.proteios.core.FileType.MSINSPECT_FEATURES";
   public static final String OPENMS_FEATURES = "org.proteios.core.FileType.OPENMS_FEATURES";
+  public static final String MZIDENTML = "org.proteios.core.FileType.MZIDENTML";
   
   /**

trunk/api/core/src/org/proteios/core/Install.java

@@ -948 +948 @@
         createFileType(FileType.OPENMS_FEATURES, "OpenMS featureXML",
         "OpenMS features files");
+        createFileType(FileType.MZIDENTML, "MzIdentML result",
+        "MzIdentML result files");
         // MimeTypes
         if (progress != null)

trunk/plugin/src/org/proteios/plugins/SearchResultsImporter.java

@@ -362 +362 @@
         FileType.TANDEM_RESULT);
       checkers.put(new OMSSAImport(file, sc), FileType.OMSSA_RESULT_XML);
+      checkers.put(new MzIdentMLImportPlugin(file, sc), FileType.MZIDENTML);
       DbControl dc = file.getDbControl();
       ItemFactory factory = new ItemFactory(dc);
@@ -405 +406 @@
       {
         return new OMSSAImport(file, sc);
+      }
+      if (sysId.equals(FileType.MZIDENTML))
+      {
+        return new MzIdentMLImportPlugin(file, sc);
       }
     }