Timeline



Sep 7, 2009:

1:16 PM Changeset [3408] by Gregory Vincic
Refs #440. Deprecating FormFactory?.getLoginForm() in favour of …
12:36 PM Changeset [3407] by Gregory Vincic
Refs #440. Adding NullForm? object to be used instead of null values
11:06 AM Changeset [3406] by Gregory Vincic
Refs #602. Removing FileMap? related methods from project.
9:19 AM Changeset [3405] by Gregory Vincic
Refs #440. LabeledExtract? related actions modified to use …
9:05 AM Changeset [3404] by Gregory Vincic
Refs #440. Implementing LabeledExtractForm? and it's components as an …

Aug 31, 2009:

9:01 AM Ticket #609 (Spectrum peaks displayed as wide) created by Fredrik Levander
Refs #592. When zooming into spectra or in spectra with few peaks, it …

Aug 26, 2009:

9:39 AM Changeset [3403] by Fredrik Levander
Refs #608. Updated CV version and charge array data type.
9:26 AM Changeset [3402] by Fredrik Levander
Fixes #608. Writing charge arrays as integers. These arrays are …
9:26 AM Ticket #608 (Write mzML integer arrays, and allow reading of files containing these.) closed by Fredrik Levander
fixed: (In [3402]) Fixes #608. Writing charge arrays as integers. These …

Aug 25, 2009:

6:04 PM Ticket #608 (Write mzML integer arrays, and allow reading of files containing these.) created by Fredrik Levander
The plgs converter should encode the charge array as an array of integers.

Aug 24, 2009:

3:22 PM Changeset [3401] by Fredrik Levander
Refs #594. Updated ftp server scripts to contain new log4j version …
1:40 PM Ticket #607 (Stacktrace after log in) closed by Fredrik Levander
fixed: Solved by changeset [3400], downgrading to Hibernate 3.3.1
1:22 PM Changeset [3400] by Gregory Vincic
Refs #594. Degrading to the more stable hibernate version 3.3.1
11:12 AM Changeset [3399] by Gregory Vincic
Refs #440. Documenting the Form class
11:09 AM Changeset [3398] by Gregory Vincic
Refs #440. Adding initial design documents.

Aug 18, 2009:

11:02 AM Ticket #607 (Stacktrace after log in) created by Fredrik Levander
When logging in as root and then as another user there is a stack …
10:03 AM Ticket #606 (Filtering of inclusion lists by protein identifier) closed by Fredrik Levander
fixed: Fixed in [3397]. Added optional external id filter.
10:01 AM Changeset [3397] by Fredrik Levander
9:57 AM Ticket #606 (Filtering of inclusion lists by protein identifier) created by Fredrik Levander
It should be possible to generate an exclusion / inclusion list (#492) …

Aug 14, 2009:

11:01 AM Ticket #544 (Execute external binaries as a plugin) closed by olle
fixed: Ticket closed as a way to execute an external binary as a plug-in, …
9:21 AM Ticket #605 (It should be possible to abort jobs for plug-ins using Apache ...) closed by olle
fixed: Ticket closed as a way to quickly abort jobs for plug-ins using Apache …

Aug 13, 2009:

3:55 PM Changeset [3396] by olle
Refs #605. Refs #544. Refs #362. Class/file …
1:55 PM Ticket #605 (It should be possible to abort jobs for plug-ins using Apache ...) created by olle
Many Proteios SE plug-ins use Apache HttpClient to access external …

Aug 12, 2009:

2:52 PM Ticket #596 (Allow admin to list active users) closed by olle
fixed: Ticket closed as the desired functionality has been added.
2:47 PM Ticket #604 (Proteios FTP server should attempt to set MIME type for uploaded file) closed by olle
fixed: Ticket closed as the desired functionality has been added.
2:45 PM Ticket #603 (Extension for setting same MIME type for several files) closed by olle
fixed: Ticket closed as the desired functionality has been added.
2:39 PM Ticket #533 (Files should be spread out on the server, not end up in one directory) closed by olle
fixed: Ticket closed as the desired functionality has been added.
2:23 PM Ticket #592 (zoom in spectra) closed by olle
fixed: Ticket closed as a simple spectra zooming functionality has been added …
2:09 PM Ticket #594 (Update hibernate lib) closed by olle
fixed: Ticket closed as Hibernate has been updated to the latest released …
1:59 PM Ticket #591 (Workflow for using mzData files with OMSSA) closed by olle
fixed: Ticket closed as support for starting an OMSSA search from an mzData …
1:51 PM Ticket #570 (Remove redundant external libraries) closed by olle
fixed: Ticket closed as the code has been updated to be able to remove xerces …
12:00 PM Changeset [3395] by olle
Refs #544. Refs #518. Class/file plugins/SearchOMSSAPlugin.java in …
11:14 AM Changeset [3394] by olle
Refs #544. Refs #518. Refs #517. First version of support for aborting …

Aug 11, 2009:

4:27 PM Changeset [3393] by olle
Refs #518. Refs #517. Refs #544. Public methods related to aborting a …
3:39 PM Changeset [3392] by olle
Refs #518. Refs #517. Refs #544. Class/file …
2:43 PM Changeset [3391] by olle
Refs #517. Refs #518. Refs #544. Class/file core/SimpleJobQueue.java …

Aug 10, 2009:

9:28 AM Changeset [3390] by Gregory Vincic
Refs #594. slf4j requires log4j version 1.2.12 or higher. Updating …
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