Timeline
Nov 19, 2010:
- 2:38 PM Ticket #705 (Add modification location and delta score to Mascot import) closed by
- fixed
- 2:37 PM Ticket #701 (Add more info to PRIDE export) closed by
- fixed: The information is now added.
- 12:54 PM Ticket #715 (Windows install fails) closed by
- fixed: Ticket closed as a fix for the problem has been added. Should the …
- 12:49 PM Changeset [4000] by
-
Refs #715. Proteios SE installation script file
install-win.batin … - 12:35 PM Changeset [3999] by
- Fixes #725. Changed random prefix to r. Still keeping support for IPR …
- 12:35 PM Ticket #725 (Change default decoy prefix) closed by
- fixed: (In [3999]) Fixes #725. Changed random prefix to r. Still keeping …
- 12:33 PM Ticket #725 (Change default decoy prefix) created by
- The IPI databases are no longer supported, and people are expected to …
Nov 18, 2010:
- 5:07 PM Installation edited by
- Changed path delimiter for Windows paths from '/' to '\'. (diff)
- 5:04 PM Installation edited by
- Description updated by fixing typo. (diff)
- 2:29 PM Installation edited by
- (diff)
- 2:20 PM Ticket #441 (Use In Project button should be shaded if no project is active) closed by
- worksforme: Ticket closed, as the desired behavior already has been implemented …
- 2:16 PM Ticket #707 (Renaming of search parameter sets) closed by
- fixed: The ticket is closed, as the desired functionality has been added. …
- 2:12 PM Installation edited by
- (diff)
- 2:11 PM Installation edited by
- (diff)
- 2:11 PM Changeset [3998] by
- Refs #707. Refs #362. Refs #287. First version of support for editing …
- 1:14 PM Changeset [3997] by
- Refs #707. Refs #471. First version of support for editing of OMSSA …
- 12:55 PM Changeset [3996] by
- Refs #707. Refs #534. Class/file …
- 12:44 PM Changeset [3995] by
- Refs #698. Removed couple of unused private methods.
- 12:37 PM Changeset [3994] by
- Refs #698. Removed method getHitPeakListForm from FormFactory.
- 12:24 PM Changeset [3993] by
- Refs #707. Refs #362. Class/file …
- 12:19 PM Changeset [3992] by
- Refs #707. Refs #287. English dictionary file locale/en/dictionary in …
- 12:18 PM Changeset [3991] by
- Refs #698. Moved method getHitPeakListForm from FormFactory to action …
- 12:08 PM Changeset [3990] by
- Refs #698. Moved method getPeakListForm from FormFactory into action …
Nov 17, 2010:
- 2:44 PM ReleaseProcedure edited by
- (diff)
- 2:44 PM TagRelease created by
- Adding instructions on how to tag a release
- 2:38 PM ReleaseProcedure edited by
- (diff)
- 2:37 PM UpdateDatabaseSchemaDoc created by
- Adding instructions on how to generate database schema doc
- 2:36 PM Changeset [3989] by
- Refs #707. Refs #287. Refs #290. First version of support for editing …
- 2:29 PM Changeset [3988] by
- Changed my developer status in the about text.
- 2:07 PM Extensions/GettingStarted edited by
- Linking to trunk versions of the examples (diff)
- 2:02 PM Extensions/GettingStarted edited by
- Linking build.xml to trunk version (diff)
- 2:00 PM Changeset [3987] by
- Added example code for extensions that is available from the manual.
- 1:44 PM Changeset [3986] by
- Refs #698. Moved method addHiddenField from FormFactory into Table …
- 1:32 PM Changeset [3985] by
- Refs #698. Removed methods newOriginalQuantityField and …
- 11:23 AM Changeset [3984] by
- Refs #698. Moved method addHiddenField(Form...) from FormFactory into …
- 11:11 AM Changeset [3983] by
- Refs #698. Removing method selectLocalSampleIdWithAllOption from …
- 11:03 AM Changeset [3982] by
- Refs #698. Removing couple of private methods for creating fields in …
- 10:02 AM Changeset [3981] by
- Refs #547. Fixed problem with long response times by setting …
- 9:53 AM Changeset [3980] by
- Refs #698. Removed method getNewProtocolForm from FormFactory
Nov 16, 2010:
- 2:50 PM Ticket #710 (Select multiple databases for Mascot search) closed by
- fixed: Ticket is closed as the desired functionality has been added. Should …
Nov 15, 2010:
- 11:15 AM Changeset [3979] by
- Fixing warning from ant when compiling. Added missing …
Nov 11, 2010:
- 2:48 PM Changeset [3978] by
- Refs #710. Refs #534. Class/file gui/form/MascotStorageForm.java in …
- 10:37 AM Changeset [3977] by
- Added log warning message
- 8:36 AM Changeset [3976] by
- Adding tests for many projects
Nov 10, 2010:
- 4:42 PM Changeset [3975] by
- Fixes #724. Fixed bug
- 4:02 PM Changeset [3974] by
- Refs #710. Refs #534. Class/file …
- 3:41 PM Changeset [3973] by
- Refs #710. Refs #534. Mascot search updated to support selection of …
- 3:25 PM Changeset [3972] by
- Fixes #724. Added plugin that lists ion injection times to file.
- 3:25 PM Ticket #724 (Report ion injection times) closed by
- fixed: (In [3972]) Fixes #724. Added plugin that lists ion injection times to …
- 3:24 PM Ticket #724 (Report ion injection times) created by
- A plugin that reports ion injectuion times in an mzML file should be …
- 11:24 AM Changeset [3971] by
- Refs #723. Refs #290. Icon image repository www/static/img/icons/ in …
- 11:22 AM Changeset [3970] by
- Refs #723. Refs #290. Icon image repository www/static/img/icons/ in …
- 10:42 AM Ticket #723 (Button icon should be displayed in gray if the button action is disabled) closed by
- fixed: The ticket is closed, as the desired functionality has been added. …
- 10:02 AM Changeset [3969] by
- Refs #723. Refs #290. Refs #441. Icon image repository …
- 9:53 AM Changeset [3968] by
- Refs #723. Class/file gui/web/GUIConverter.java in client/servlet/ …
- 8:44 AM Ticket #723 (Button icon should be displayed in gray if the button action is disabled) created by
- A button icon should be displayed in gray if the button action is …
- 8:20 AM Ticket #702 (Logged-in users are not always visible) closed by
- worksforme: Needs to be verified so it's not just a session timeout.
Nov 8, 2010:
- 3:02 PM Ticket #719 (Project table scroller on Home page results in NullPointerException) closed by
- fixed: The ticket is closed, as the desired functionality has been added. …
- 3:01 PM Ticket #718 (Menu items below View > Trash should be inactivated if they are empty) closed by
- fixed: The ticket is closed, as the desired functionality has been added. …
- 3:00 PM Ticket #704 (Deleting a project does not place the project in Trash) closed by
- fixed: The ticket is closed, as the desired functionality has been added. …
- 2:59 PM Ticket #547 (Select Project list too long) closed by
- fixed: The ticket is closed, as the desired functionality has been added. …
- 2:58 PM Ticket #700 (New X!tandem form) closed by
- fixed: The ticket is closed, as the desired functionality has been added. …
- 2:51 PM Changeset [3967] by
- Refs #718. Class/file gui/MainMenu.java in client/servlet/ updated to …
- 2:29 PM Ticket #722 (Add delete button to hits table for partial deletion of ...) created by
- 2:21 PM Ticket #721 (Webservice create project fails to share project directory to project) created by
- 1:56 PM Ticket #720 (Add context for ViewFile) created by
- To enable extensions that work on a file for a specific file type.
- 12:41 PM Changeset [3966] by
- Refs #719. Class/file action/read/ViewHome.java in client/servleT/ …
- 11:52 AM Changeset [3965] by
- Refs #698. Removed method getUserPreferencesConfigurationForm from …
- 11:25 AM Changeset [3964] by
- Refs #719. Class/file action/read/ViewHome.java in client/servleT/ …
- 11:15 AM Ticket #719 (Project table scroller on Home page results in NullPointerException) created by
- If a user has more projects than can be fitted in the projects table …
- 10:57 AM Ticket #718 (Menu items below View > Trash should be inactivated if they are empty) created by
- Also if there is nothing in the trash, the main View -> Trash should …
- 9:13 AM Ticket #717 (Move some of the hit table buttons to an Extensions button) created by
- The toolbar is far to long and wraps over two lines. Move some of the …
Nov 5, 2010:
- 1:24 PM Changeset [3963] by
- Refs #716. Removed description cell in table popup.
- 1:21 PM Changeset [3962] by
- Refs #716. Removed description attribute of FileContext?
- 1:20 PM Ticket #716 (Remove description in Extension popups) created by
- 12:50 PM Changeset [3961] by
- Fixed last column border in popups aswell.
- 12:42 PM Changeset [3960] by
- Added titles to ViewHelp? and ViewAbout?
- 12:35 PM Changeset [3959] by
- Server messages title is now wide.
- 12:09 PM Changeset [3958] by
- Refs #704. Refs #585. Class/file plugins/ProjectToTrash.java in …
- 11:59 AM Changeset [3957] by
- Refs #704. Refs #585. Class/file action/project/TrashProject.java in …
- 11:52 AM Changeset [3956] by
- Refs #704. Refs #523. Refs #620. Routines for permanently removing …
- 11:49 AM Changeset [3955] by
- Removed 'New Project' button from My Projects table, also made …
- 11:32 AM Changeset [3954] by
- Fixed shadown for popup. Filter row is hidden if there are no visible …
- 11:12 AM Changeset [3953] by
- Refs #704. Refs #523. Refs #620. Routines for listing, restoring or …
- 10:51 AM Changeset [3952] by
- Refs #704. Refs #585. Refs #287. Project table tool bar updated to …
- 10:39 AM Changeset [3951] by
- Padded data within tables and made the font a bit smaller.
- 10:36 AM Changeset [3950] by
- Centered icons in toolbars more precisely.
- 10:32 AM Changeset [3949] by
- Added shaded background to titles and toolbars.
- 10:23 AM Changeset [3948] by
- Cleaned up small log to match the size of the menu bar. Also modified …
Nov 4, 2010:
- 4:08 PM Changeset [3947] by
- Refs #698. Moved method getSpectrumFileContactForm from FormFactory …
- 4:02 PM Changeset [3946] by
- Refs #698. Removed method addTableRow from FormFactory, also …
- 2:56 PM Changeset [3945] by
- Refs #698. Moved method getSpectrumFileInstrumentForm from …
Nov 3, 2010:
- 2:36 PM Changeset [3944] by
- Refs #691. Removed action ListPeakListSet? as it was only used from the …
- 10:00 AM Changeset [3943] by
- Refs #698. Removed method getExportPeakListSetForm. Also the …
Nov 2, 2010:
- 2:58 PM Changeset [3942] by
- Refs #698. Removing method getSetFilterForm and related methods/classes.
- 2:06 PM Changeset [3941] by
- Refs #698. Moved method getForm(FormTemplateInterface?) and related …
- 1:23 PM Changeset [3940] by
- Refs #698. Fixing compile error.
- 1:14 PM Changeset [3939] by
- Refs #698. Removed method getViewUserPropertiesForm.
- 12:54 PM Changeset [3938] by
- Refs #698. Removed method getMyProfilePropertiesForm.
- 12:46 PM Changeset [3937] by
- Refs #698. Moved populateForm implementation to ProteiosAction.
- 11:20 AM Changeset [3936] by
- Refs #698. Removed unused methods directoryOptions and selectDirectory.
- 11:16 AM Changeset [3935] by
- Refs #698. Renaming method getFormImpl to getForm thus removing old …
- 9:29 AM Changeset [3934] by
- Refs #698. Moved getSpectrumFileContactInputForm to action …
Nov 1, 2010:
- 3:59 PM Installation edited by
- Section "Quick Install" updated with recommendation to avoid space … (diff)
- 1:42 PM Changeset [3933] by
- Refs #547. Refs #287. First version of limited number of items in the …
- 11:25 AM Changeset [3932] by
- Refs #698. Removed unused method newQuantityField from FormFactory.
- 11:22 AM Changeset [3931] by
- Refs #698. Removed unused method newExtractQuantityField from FormFactory.
- 11:19 AM Changeset [3930] by
- Refs #698. Removed unused private method listStringToStringList().
- 11:07 AM Changeset [3929] by
- Refs #698. Moved getTrashCanForm method out from FormFactory? and into …
- 9:34 AM Changeset [3928] by
- Refs #698. Removed method getFileProtocolTypeForm and …
- 8:56 AM Changeset [3927] by
- Refs #698. Removed method getSeparationForm as this method is not used …
- 8:51 AM Changeset [3926] by
- Removing author attribute as I am no longer the main author of that file.
- 8:45 AM Changeset [3925] by
- Setting Id keyword
Oct 29, 2010:
- 2:38 PM Changeset [3924] by
- Refs #698. Fixed plugin selection form for import, convert and analyse …
- 11:26 AM Ticket #709 (Upload file allows to save without selecting a local file) closed by
- fixed: The ticket is closed, as a solution has been found to the described …
- 11:21 AM Ticket #713 (By default hide the description field of directories and files in ...) closed by
- fixed: The ticket is closed, as the desired functionality has been added. …
- 11:17 AM Ticket #714 (Moving many files fails) closed by
- fixed: The ticket is closed, as a solution has been found to the described …
- 11:07 AM Changeset [3923] by
- Refs #714. Code for moving files updated to transfer list of id values …
- 9:44 AM Changeset [3922] by
- Refs #714. Class/file waf/AbstractAction.java in api/waf/ updated: 1. …
Oct 28, 2010:
- 6:10 PM Ticket #715 (Windows install fails) created by
- If the Proteios package is downloaded to a place containing a space in …
- 1:16 PM Changeset [3921] by
- Removed closePopup method, using hide() instead
- 11:22 AM Changeset [3920] by
- Making javascript context unaware. Context is now defined in …
- 11:01 AM Changeset [3919] by
- Tidying javascript, also fixing initTable so it does'nt do anything if …
Oct 26, 2010:
- 8:30 AM Changeset [3918] by
- Debug mode now shows list parameters correctly
Oct 25, 2010:
- 10:07 AM Changeset [3917] by
- Refs #713. Class/file action/directory/ViewActiveDirectory.java in …
- 9:57 AM Changeset [3916] by
- Refs #713. Class/file action/directory/ViewActiveDirectory.java in …
- 9:39 AM Changeset [3915] by
- Refs #713. Default setting for tables in the file/directory form …
- 9:39 AM Ticket #714 (Moving many files fails) created by
- Probably this means the file id's that are to be moved are placed in …
Oct 21, 2010:
- 3:56 PM Changeset [3914] by
- Refs #672. Handling peptide total intensity of null
- 3:49 PM Changeset [3913] by
- Refs #672. Handling peptide total intensity of null
- 3:10 PM Changeset [3912] by
- Refs #672. Handling spectrum lookup problems.
- 2:22 PM Changeset [3911] by
- Refs #709. Class/file action/file/SaveFile.java in client/servlet/ …
- 2:20 PM Changeset [3910] by
- Refs #672. Avoiding rare null pointer exception
- 2:18 PM Changeset [3909] by
- Refs #709. Class/file action/file/SaveFile.java in client/servlet/ …
- 11:47 AM Changeset [3908] by
- Refs #711. Added feature to use nested fieldsets within forms. These …
- 11:21 AM Changeset [3907] by
- Refs #700. New single-form version of routine for separating standard …
- 10:58 AM Changeset [3906] by
- Refs #700. Changes added to class …
- 8:56 AM Changeset [3905] by
- Refs #711. Using + and - icons for fieldset toggling.
Oct 20, 2010:
- 4:47 PM Changeset [3904] by
- Refs #700. Refs #287. First version of support for simple search form …
- 3:49 PM Changeset [3903] by
- Refs #700. Class/file gui/form/XTandemParameterSetFormSimple.java in …
- 2:41 PM Changeset [3902] by
- Refs #700. New class/file gui/form/XTandemParameterSetFormSimple.java …
- 2:13 PM Changeset [3901] by
- Refs #700. Class/file gui/form/XTandemParameterSetForm.java in …
- 1:18 PM Changeset [3900] by
- Refs #700. Creation of option alternatives for X!Tandem searches is …
- 1:14 PM Ticket #713 (By default hide the description field of directories and files in ...) created by
- Also modify the Name column to be a big text column by calling …
- 1:10 PM Changeset [3899] by
- Fixes #712.
- 1:10 PM Ticket #712 (Make "Upload Demo Files" into a context enabled action) closed by
- fixed: (In [3899]) Fixes #712.
- 1:10 PM Ticket #712 (Make "Upload Demo Files" into a context enabled action) created by
- It should not be available as a button in the toolbar.
- 12:38 PM Changeset [3898] by
- Refs #700. Class/file gui/form/Select.java in client/servlet/ updated …
- 12:23 PM Changeset [3897] by
- Refs #700. Select boxes updated to allow hidden select boxes: 1. …
- 11:25 AM Changeset [3896] by
- Refs #711. Added rule that if there is only one fieldset in a form the …
- 10:00 AM Changeset [3895] by
- Adding target clean-test in client/servlet/build.xml
- 9:35 AM Ticket #711 (Let the user show/hide fieldsets in a form) closed by
- fixed: (In [3894]) Fixes #711. Use method fieldset.setOpen(false) to hide the …
- 9:35 AM Changeset [3894] by
- Fixes #711. Use method fieldset.setOpen(false) to hide the fieldset.
- 9:35 AM Ticket #711 (Let the user show/hide fieldsets in a form) created by
- This would be a way for developers to hide advanced fields by default.
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