|
|
@1536
|
16 years |
fredrik |
Bug fix: The protein hits report was filtered on evalues, even if that …
|
|
|
@1535
|
16 years |
Jari Häkkinen |
Tagging release 1.1.5
|
|
|
@1534
|
16 years |
fredrik |
Preparing for release of version 1.1.5
|
|
|
@1533
|
16 years |
fredrik |
Removed some decimals from summary message.
|
|
|
@1532
|
16 years |
fredrik |
Combined report changed to allow for comparison on peptide level as …
|
|
|
@1531
|
16 years |
fredrik |
Tandem input bug corrected. peptides didn't have the correct parent …
|
|
|
@1530
|
16 years |
fredrik |
|
|
|
@1529
|
16 years |
fredrik |
Typo
|
|
|
@1528
|
16 years |
fredrik |
Major revision of standard protein report to accomodate large lists. …
|
|
|
@1527
|
16 years |
Jari Häkkinen |
Tagging version 1.1.4
|
|
|
@1526
|
16 years |
fredrik |
Now checking if there really are results from more than one search …
|
|
|
@1525
|
16 years |
fredrik |
Preparing for release 1.1.4. Removed possibility of listing x best …
|
|
|
@1524
|
16 years |
fredrik |
Updated documentation with DTA import and gel with spot picking sample file
|
|
|
@1523
|
16 years |
fredrik |
Tandem date filtering corrected.
|
|
|
@1522
|
16 years |
fredrik |
Corrected tag name for import of Mascot XML result. Now possible to …
|
|
|
@1521
|
16 years |
fredrik |
Adjusted GUI for batch DTA import
|
|
|
@1520
|
16 years |
fredrik |
Added import of DTA files (merged or single). Instrument parameters …
|
|
|
@1519
|
16 years |
Jari Häkkinen |
Tagging version 1.1.3
|
|
|
@1518
|
16 years |
fredrik |
Changed link to binary package
|
|
|
@1517
|
16 years |
fredrik |
tagged version 1.1.3
|
|
|
@1516
|
16 years |
fredrik |
Modified the counting of false positives
|
|
|
@1515
|
16 years |
Jari Häkkinen |
Removing obsolete branch.
|
|
|
@1514
|
16 years |
Jari Häkkinen |
Removing obsolete branch.
|
|
|
@1513
|
16 years |
Jari Häkkinen |
Removing obsolete branch.
|
|
|
@1512
|
16 years |
Jari Häkkinen |
Removing obsolete branch.
|
|
|
@1511
|
16 years |
Jari Häkkinen |
Removing obsolete branch.
|
|
|
@1510
|
16 years |
Jari Häkkinen |
Removing obsolete branch.
|
|
|
@1509
|
16 years |
Jari Häkkinen |
Removing obsolete branch.
|
|
|
@1508
|
16 years |
Jari Häkkinen |
Removing obsolete branch.
|
|
|
@1507
|
16 years |
Jari Häkkinen |
Tagging version 1.1.2
|
|
|
@1506
|
16 years |
Jari Häkkinen |
Added version number property and copyright statement to build.xml,
|
|
|
@1505
|
16 years |
fredrik |
Updated instructions
|
|
|
@1504
|
16 years |
fredrik |
Removed spectrum file from package. The import is deprecated
|
|
|
@1503
|
16 years |
fredrik |
Added PKL import to documentation
|
|
|
@1502
|
16 years |
fredrik |
Update link to Proteios 1.1.2 binary archive
|
|
|
@1501
|
16 years |
fredrik |
Allowed export of reports by right-clicking
|
|
|
@1500
|
16 years |
fredrik |
More conservative statistics in combined report
|
|
|
@1499
|
16 years |
fredrik |
New default settings for report
|
|
|
@1498
|
16 years |
fredrik |
Updated some info about installation and imports
|
|
|
@1497
|
16 years |
fredrik |
Update version info and some links
|
|
|
@1496
|
16 years |
fredrik |
Updated reports to allow for different prefixes for reverse database …
|
|
|
@1495
|
16 years |
fredrik |
Remake of Combined Protein Hits Report
|
|
|
@1494
|
16 years |
fredrik |
Also 1D gel
|
|
|
@1493
|
16 years |
fredrik |
false ratio calculation
|
|
|
@1492
|
16 years |
fredrik |
select error ratio
|
|
|
@1491
|
16 years |
Jari Häkkinen |
Updated Proteios datamodel diagram and corrected errors in …
|
|
|
@1490
|
16 years |
fredrik |
Changed to string type to accept empty dateTime
|
|
|
@1489
|
16 years |
fredrik |
Changed to string type to accept empty dateTime
|
|
|
@1488
|
16 years |
Jari Häkkinen |
New release.
|
|
|
@1487
|
16 years |
fredrik |
bug fix
|
|
|
@1486
|
16 years |
fredrik |
Now removing subsequence hits from CombinedProteinHitsReport?
|
|
|
@1485
|
16 years |
fredrik |
Now valid schema
|
|
|
@1484
|
16 years |
Jari Häkkinen |
New database proterties.
|
|
|
@1483
|
16 years |
Jari Häkkinen |
Removing obsolete tag.
|
|
|
@1482
|
16 years |
Jari Häkkinen |
Changing tag name to release-1.0.
|
|
|
@1481
|
16 years |
Jari Häkkinen |
Changing tag name to release-0.9.
|
|
|
@1480
|
16 years |
Jari Häkkinen |
Changing tag name to release-0.8.
|
|
|
@1479
|
16 years |
Jari Häkkinen |
Changing tag name to release-0.7.1.
|
|
|
@1478
|
16 years |
Jari Häkkinen |
Changing tag name to release-0.7.
|
|
|
@1477
|
16 years |
Jari Häkkinen |
Changing tag name to release-0.6.
|
|
|
@1476
|
16 years |
Jari Häkkinen |
Changing tag name to release-0.5.
|
|
|
@1475
|
16 years |
Jari Häkkinen |
Changing tag name to release-0.4.
|
|
|
@1474
|
16 years |
Jari Häkkinen |
Creating a new release 1.1 tag.
|
|
|
@1473
|
16 years |
Jari Häkkinen |
Removing erroneous 1.1 (to be replaced with a new 1.1)
|
|
|
@1472
|
16 years |
fredrik |
batch mzData/pkl import changed so that target_id can be set
|
|
|
@1471
|
16 years |
fredrik |
Protein Hits Report date filtering adjusted to filter for whole dates
|
|
|
@1470
|
16 years |
Jari Häkkinen |
New release.
|
|
|
@1469
|
16 years |
fredrik |
Improved sorting of combine protein hits report
|
|
|
@1468
|
16 years |
fredrik |
Combined protein hits report export to file added
|
|
|
@1467
|
16 years |
fredrik |
GUI changes for new combined protein hits report and changed import of …
|
|
|
@1466
|
16 years |
fredrik |
New query function added to SQL connection. Writing queries to console …
|
|
|
@1465
|
16 years |
fredrik |
Changed MzData? so that only one mzAnalysis child with a given …
|
|
|
@1464
|
16 years |
fredrik |
New combined Mascot and Tandem results report added
|
|
|
@1463
|
16 years |
fredrik |
Changed tandem import to convert protein expect to real expectation value
|
|
|
@1462
|
16 years |
fredrik |
Updated xsd for X!tandem import
|
|
|
@1461
|
16 years |
fredrik |
Opimised ProteinHitsReport?
|
|
|
@1460
|
16 years |
fredrik |
Opimised evictElement
|
|
|
@1459
|
16 years |
fredrik |
Removed elements from figure. MzAnalysis? part should be added
|
|
|
@1458
|
16 years |
fredrik |
Not saving a lot of temp files when importing mzData anymore
|
|
|
@1457
|
16 years |
fredrik |
Delete message added and PeakList? batch import in separate SQLEvictSession
|
|
|
@1456
|
16 years |
fredrik |
xalan.jar needed in classpath
|
|
|
@1455
|
16 years |
fredrik |
Reduced classpath in run_proteios.bat
|
|
|
@1454
|
16 years |
fredrik |
Now using separate session and evict to avoid filling the hibernate …
|
|
|
@1453
|
16 years |
Jari Häkkinen |
Removed dependency on many .jar files.
|
|
|
@1452
|
16 years |
Jari Häkkinen |
Updated text.
|
|
|
@1451
|
16 years |
Jari Häkkinen |
Removed LSID stuff.
|
|
|
@1450
|
16 years |
Jari Häkkinen |
Removing unused jar.
|
|
|
@1449
|
16 years |
fredrik |
Proteios 1.1
|
|
|
@1448
|
16 years |
fredrik |
Proteios 1.1
|
|
|
@1447
|
16 years |
fredrik |
Export version 1.1. The export will build the entire DOM tree in …
|
|
|
@1446
|
16 years |
fredrik |
Update databases to 1.1 by XSL
|
|
|
@1445
|
16 years |
fredrik |
Schemas updated for 1.1
|
|
|
@1444
|
16 years |
fredrik |
Prepare for 1.1 release
|
|
|
@1443
|
16 years |
Jari Häkkinen |
Changed location for modified LSID package.
|
|
|
@1442
|
16 years |
fredrik |
mzdata batch export rewritten to minimise problem with cache filling up
|
|
|
@1441
|
16 years |
fredrik |
Some memory optimisation. More to be done!
|
|
|
@1440
|
16 years |
fredrik |
New getElements function which will query for elements with given …
|
|
|
@1439
|
16 years |
fredrik |
Batch import of PKL / mzData changed to be more memory efficient
|
|
|
@1438
|
16 years |
Jari Häkkinen |
Clarified Windows version.
|
|
|
@1437
|
16 years |
fredrik |
Now also generating the obligatory 'activation' element
|
|
|