1 | // $Id: CrossValidationSampler.cc 1392 2008-07-28 19:35:30Z peter $ |
---|
2 | |
---|
3 | /* |
---|
4 | Copyright (C) 2006, 2007 Jari Häkkinen, Peter Johansson |
---|
5 | Copyright (C) 2008 Peter Johansson |
---|
6 | |
---|
7 | This file is part of the yat library, http://dev.thep.lu.se/yat |
---|
8 | |
---|
9 | The yat library is free software; you can redistribute it and/or |
---|
10 | modify it under the terms of the GNU General Public License as |
---|
11 | published by the Free Software Foundation; either version 2 of the |
---|
12 | License, or (at your option) any later version. |
---|
13 | |
---|
14 | The yat library is distributed in the hope that it will be useful, |
---|
15 | but WITHOUT ANY WARRANTY; without even the implied warranty of |
---|
16 | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
---|
17 | General Public License for more details. |
---|
18 | |
---|
19 | You should have received a copy of the GNU General Public License |
---|
20 | along with this program; if not, write to the Free Software |
---|
21 | Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA |
---|
22 | 02111-1307, USA. |
---|
23 | */ |
---|
24 | |
---|
25 | #include "CrossValidationSampler.h" |
---|
26 | #include "Target.h" |
---|
27 | #include "yat/random/random.h" |
---|
28 | |
---|
29 | #include <algorithm> |
---|
30 | #include <cassert> |
---|
31 | #include <utility> |
---|
32 | #include <vector> |
---|
33 | |
---|
34 | namespace theplu { |
---|
35 | namespace yat { |
---|
36 | namespace classifier { |
---|
37 | |
---|
38 | CrossValidationSampler::CrossValidationSampler(const Target& target, |
---|
39 | const size_t N, |
---|
40 | const size_t k) |
---|
41 | : Sampler(target, N), k_(k) |
---|
42 | { |
---|
43 | assert(target.size()>1); |
---|
44 | build(target, N, k); |
---|
45 | } |
---|
46 | |
---|
47 | CrossValidationSampler::~CrossValidationSampler() |
---|
48 | { |
---|
49 | } |
---|
50 | |
---|
51 | void CrossValidationSampler::build(const Target& target, size_t N, size_t k) |
---|
52 | { |
---|
53 | std::vector<std::pair<size_t,size_t> > v; |
---|
54 | for (size_t i=0; i<target.size(); i++) |
---|
55 | v.push_back(std::make_pair(target(i),i)); |
---|
56 | // sorting with respect to class |
---|
57 | std::sort(v.begin(),v.end()); |
---|
58 | |
---|
59 | // my_begin[i] is index of first sample of class i |
---|
60 | std::vector<size_t> my_begin; |
---|
61 | my_begin.reserve(target.nof_classes()); |
---|
62 | my_begin.push_back(0); |
---|
63 | for (size_t i=1; i<target.size(); i++) |
---|
64 | while (v[i].first > my_begin.size()-1) |
---|
65 | my_begin.push_back(i); |
---|
66 | my_begin.push_back(target.size()); |
---|
67 | |
---|
68 | for (size_t i=0; i<N; ) { |
---|
69 | // shuffle indices within class each class |
---|
70 | for (size_t j=0; j+1<my_begin.size(); ++j) |
---|
71 | random::random_shuffle(v.begin()+my_begin[j],v.begin()+my_begin[j+1]); |
---|
72 | |
---|
73 | for (size_t part=0; part<k && i<N; i++, part++) { |
---|
74 | std::vector<size_t> training_index; |
---|
75 | std::vector<size_t> validation_index; |
---|
76 | for (size_t j=0; j<v.size(); j++) { |
---|
77 | if (j%k==part) |
---|
78 | validation_index.push_back(v[j].second); |
---|
79 | else |
---|
80 | training_index.push_back(v[j].second); |
---|
81 | } |
---|
82 | |
---|
83 | training_index_.push_back(utility::Index(training_index)); |
---|
84 | validation_index_.push_back(utility::Index(validation_index)); |
---|
85 | } |
---|
86 | } |
---|
87 | assert(training_index_.size()==N); |
---|
88 | assert(validation_index_.size()==N); |
---|
89 | |
---|
90 | for (size_t i=0; i<N; ++i){ |
---|
91 | training_target_.push_back(Target(target,training_index_[i])); |
---|
92 | validation_target_.push_back(Target(target,validation_index_[i])); |
---|
93 | } |
---|
94 | assert(training_target_.size()==N); |
---|
95 | assert(validation_target_.size()==N); |
---|
96 | } |
---|
97 | |
---|
98 | }}} // of namespace classifier, yat, and theplu |
---|