source: branches/0.6-stable/yat/utility/utility.h @ 2317

#ifndef _theplu_yat_utility_utility_
#define _theplu_yat_utility_utility_ 

// $Id: utility.h 2317 2010-08-20 04:10:07Z peter $

/*
  Copyright (C) 2005 Jari Häkkinen, Peter Johansson, Markus Ringnér
  Copyright (C) 2006 Jari Häkkinen
  Copyright (C) 2007, 2008 Jari Häkkinen, Peter Johansson
  Copyright (C) 2009, 2010 Peter Johansson

  This file is part of the yat library, http://dev.thep.lu.se/yat

  The yat library is free software; you can redistribute it and/or
  modify it under the terms of the GNU General Public License as
  published by the Free Software Foundation; either version 3 of the
  License, or (at your option) any later version.

  The yat library is distributed in the hope that it will be useful,
  but WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
  General Public License for more details.

  You should have received a copy of the GNU General Public License
  along with yat. If not, see <http://www.gnu.org/licenses/>.
*/

///
/// \file yat/utility/utility.h
///
/// @brief Some useful functions are placed here
///

#include "deprecate.h"
#include "Exception.h"

#include <cmath>
#include <limits>
#include <istream>
#include <string>
#include <stdexcept>
#include <sstream>
#include <utility>
#include <vector>

namespace theplu {
namespace yat {
namespace utility {

  /**
     For each element in resulting range assign it to 0.0 if
     corresponding element in input range is NaN else assign it to
     1.0.

     \return true if there is at least one NaN in input range
     [first, last).

     \since New in yat 0.5
  */
  template<typename InputIterator, typename OutputIterator>
  bool binary_weight(InputIterator first, InputIterator last, 
                     OutputIterator result);


  /**
     \brief convert string to (numerical) type

     \throw runtime_error if conversion fails
   */
  template<typename T>
  T convert(const std::string& s);

  /**
     \brief check if string is convertible to (numerical) type

     \since New in yat 0.5
   */
  template<typename T>
  bool is(const std::string& s);

  ///
  /// @return true if string is a double
  ///
  /// \deprecated Provided for backward compatibility with the 0.4
  /// API. Use is<double>(const std::string&)
  ///
  bool is_double(const std::string&) YAT_DEPRECATE;

  /**
     This function takes the first word (separated by whitespace) in
     \a s, replaces all upper case with lower case, and compares it
     with \a other.

     \return true if processed \a s is equal to \a other. It returns
     false otherwise or if \a s contains more than one word.
  */
  bool is_equal(std::string s, std::string other);

  ///
  /// @return true if string is a float
  ///
  /// \deprecated Provided for backward compatibility with the 0.4
  /// API. Use is<float>(const std::string&)
  ///
  bool is_float(const std::string&) YAT_DEPRECATE;

  ///
  /// @return true if string is an int
  ///
  /// \deprecated Provided for backward compatibility with the 0.4
  /// API. Use is<int>(const std::string&)
  ///
  bool is_int(const std::string&) YAT_DEPRECATE;

  ///
  /// @return true if string is "nan" (case-insensitive) 
  ///
  bool is_nan(const std::string& s);

  /**
     The std::istream will be interpreted as outlined here:

     Lines are separated by character \a line_sep and rows are
     separated by character \a sep. 
     
     The first line is read into a stringstream, which is used to
     load the first vector (vec[0]) with elements using
     load(stringstream, vec[0], sep).
     
     Therefore, column elements separation has two modes depending
     on the value of \a sep.
     
     - If \a sep is the default '\\0' value then column elements are
     separated with white space characters except the new line
     character. Multiple sequential white space characters are treated
     as one separator.
     
     - Setting \a sep to something else than the default value will
     change the behaviour to use the \a sep character as the separator
     between column elements. Multiple sequential \a sep characters
     will be treated as separating elements with missing values.

     If \a rectangle is true, rows must contain same number of
     elements or function will throw.

     If \a ignore_empty is true empty lines are ignored.

     \see load(std::istream&, std::vector<T>&, char sep='\\0')

     \note Requirement on T: utility::convert<T> must be supported

     \since New in yat 0.6
   */
  template<typename T>
  void load(std::istream& is, std::vector<std::vector<T> >& vec, char sep='\0', 
            char line_sep='\n', bool ignore_empty=false, bool rectangle=true);

  /**
     \brief Fill a vector<T> with elements from istream

     Element separation has two modes depending on the value of \a
     sep.
     
     - If \a sep is the default '\\0' value then elements are
     separated with white space characters. Multiple sequential white
     space characters are treated as one separator.
     
     - Setting \a sep to something else than the default value will
     change the behaviour to use the \a sep character as the
     separator between column elements. Multiple sequential \a sep
     characters will be treated as separating elements with missing
     values. Missing values are set to std::numeric_limits<T>::quiet_NaN
     
     \note Requirement on T: utility::convert<T> must be supported

     \since New in yat 0.6
   */
  template<typename T>
  void load(std::istream& is, std::vector<T>& vec, char sep='\0');
  
  // template implementations

  template<typename InputIterator, typename OutputIterator>
  bool binary_weight(InputIterator first, InputIterator last, 
                     OutputIterator result)
  {
    bool nan=false;
    while (first!=last) {
      if (std::isnan(*first)) {
        *result=0;
        nan=true;
      }
      else
        *result = 1.0;
      ++first;
      ++result;
    }
    return nan;
  }


  // template implementations
  template<typename T>
  T convert(const std::string& s)
  {
    if (is_nan(s))
      return std::numeric_limits<T>::quiet_NaN();
    if (is_equal(s, "inf"))
      return std::numeric_limits<T>::infinity();
    if (is_equal(s, "-inf")) {
      if (std::numeric_limits<T>::is_signed)
        return -std::numeric_limits<T>::infinity();
      else
        throw std::runtime_error(std::string("yat::utility::convert(\"")+s+
                                 std::string("\"): type is unsigned") );
    }
    std::stringstream ss(s);
    T a;
    ss >> a;
    bool ok = true;
    if(ss.fail()) 
      ok = false;
    // Check that nothing is left on stream
    std::string b;
    ss >> b;
    if (!b.empty() || !ok)
      throw std::runtime_error(std::string("yat::utility::convert(\"")+s+
                               std::string("\")"));
    return a;
  }

  template<typename T>
  bool is(const std::string& s)
  {
    if (is_nan(s))
      return std::numeric_limits<T>::has_quiet_NaN;
    if (is_equal(s, "inf"))
      return std::numeric_limits<T>::has_infinity;
    if (is_equal(s, "-inf"))
      return std::numeric_limits<T>::has_infinity && 
        std::numeric_limits<T>::is_signed;
    std::stringstream ss(s);
    T a;
    ss >> a;
    if(ss.fail())
      return false;
    // Check that nothing is left on stream
    std::string b;
    ss >> b;
    return b.empty();
  }

  template<typename T>
  void load(std::istream& is, std::vector<std::vector<T> >& matrix, 
            char sep, char line_sep, bool ignore_empty, 
            bool rectangle)
  {
    size_t nof_columns=0;
    std::string line;
    while(getline(is, line, line_sep)){
      if (line.empty() && ignore_empty)
        continue;
      matrix.resize(matrix.size()+1);
      std::vector<T>& v=matrix.back();
      v.reserve(nof_columns);
      std::stringstream ss(line);
      load(ss, v, sep);
      // add NaN for final separator
      if(sep!='\0' && !line.empty() && line[line.size()-1]==sep) 
        v.push_back(std::numeric_limits<T>::quiet_NaN());
      
      if (rectangle && nof_columns && v.size()!=nof_columns) {
        std::ostringstream s;
        s << "load data file error: "
          << "line " << matrix.size() << " has " << v.size()
          << " columns; expected " << nof_columns << " columns.";
        throw utility::IO_error(s.str());
      }       
      nof_columns = std::max(nof_columns, v.size());
    }

    // manipulate the state of the stream to be good
    is.clear(std::ios::goodbit);
  }

  template<typename T>
  void load(std::istream& is, std::vector<T>& vec, char sep='\0')
  {
    std::string element;
    bool ok=true;
    while(ok) {
      if(sep=='\0')
        ok=(is>>element);
      else
        ok=getline(is, element, sep);
      if(!ok)
        break;
      
      if (!element.size())
        vec.push_back(std::numeric_limits<T>::quiet_NaN());
      else {
        vec.push_back(convert<T>(element));
      }
    }
  }           

}}} // of namespace utility, yat, and theplu

#endif