../
|
Alignment.cc
|
1.5 KB
|
256
|
18 years
|
Peter |
added functionality to get information about best path
|
Alignment.h
|
1.3 KB
|
256
|
18 years
|
Peter |
added functionality to get information about best path
|
Averager.cc
|
546 bytes
|
197
|
19 years
|
Jari Häkkinen |
Cleanup interfaces for Averager classes and move stuff into statsitics …
|
Averager.h
|
2.8 KB
|
218
|
18 years
|
Peter |
sum_xsqr_centered(void) added
|
AveragerPair.cc
|
800 bytes
|
197
|
19 years
|
Jari Häkkinen |
Cleanup interfaces for Averager classes and move stuff into statsitics …
|
AveragerPair.h
|
3.3 KB
|
252
|
18 years
|
Peter |
corrected calculation of ccc
|
ConsensusInputRanker.cc
|
2.8 KB
|
196
|
19 years
|
Jari Häkkinen |
Changed Statistics class to statisics namespace.
Fixed other minor issues.
|
ConsensusInputRanker.h
|
1.9 KB
|
152
|
19 years
|
Peter |
fixed cv bug
|
CrossValidation.cc
|
1.5 KB
|
123
|
19 years
|
Peter |
modified to be balanced between classes
|
CrossValidation.h
|
1.1 KB
|
135
|
19 years
|
Peter |
added doc
|
FileIO.cc
|
678 bytes
|
58
|
19 years
|
Jari Häkkinen |
Implemented first version of KKNImpute.
Minor fixes.
|
FileIO.h
|
992 bytes
|
144
|
19 years
|
Jari Häkkinen |
* empty log message *
|
Fisher.cc
|
3.0 KB
|
196
|
19 years
|
Jari Häkkinen |
Changed Statistics class to statisics namespace.
Fixed other minor issues.
|
Fisher.h
|
3.1 KB
|
187
|
19 years
|
Peter |
fixed bug with inheritance of p_value()
|
GaussianKernelFunction.cc
|
1.5 KB
|
163
|
19 years
|
Peter |
Design of Kernel class modified
|
GaussianKernelFunction.h
|
1.5 KB
|
163
|
19 years
|
Peter |
Design of Kernel class modified
|
gslapi_utility.cc
|
601 bytes
|
257
|
18 years
|
Jari Häkkinen |
Added vector views and made vector member functions to be non-member …
|
gslapi_utility.h
|
1.1 KB
|
257
|
18 years
|
Jari Häkkinen |
Added vector views and made vector member functions to be non-member …
|
Histogram.cc
|
1.9 KB
|
231
|
18 years
|
Peter |
filled incomplete stuff
|
Histogram.h
|
4.3 KB
|
231
|
18 years
|
Peter |
filled incomplete stuff
|
InputRanker.cc
|
2.4 KB
|
162
|
19 years
|
Peter |
choice of maximal epochs added in SVM
|
InputRanker.h
|
1.7 KB
|
150
|
19 years
|
Peter |
fixed major bug
|
Kernel.cc
|
719 bytes
|
166
|
19 years
|
Peter |
Kernel object modified to contain information about the KernelFunction? …
|
Kernel.h
|
1.2 KB
|
166
|
19 years
|
Peter |
Kernel object modified to contain information about the KernelFunction? …
|
KernelFunction.h
|
926 bytes
|
163
|
19 years
|
Peter |
Design of Kernel class modified
|
kNNI.cc
|
1.9 KB
|
234
|
18 years
|
Peter |
* empty log message *
|
kNNI.h
|
1000 bytes
|
241
|
18 years
|
Jari Häkkinen |
Cleaned up size_t/u_int confusion.
|
Makefile.am
|
1.3 KB
|
257
|
18 years
|
Jari Häkkinen |
Added vector views and made vector member functions to be non-member …
|
matrix.cc
|
3.8 KB
|
242
|
18 years
|
Jari Häkkinen |
Fixed mul_elements documentation, and made it inline.
|
matrix.h
|
5.9 KB
|
242
|
18 years
|
Jari Häkkinen |
Fixed mul_elements documentation, and made it inline.
|
Merge.cc
|
2.8 KB
|
200
|
19 years
|
Peter |
Simplified interface to WeightedAverager?
|
Merge.h
|
1.6 KB
|
105
|
19 years
|
cecilia |
handle missing values
|
NNI.cc
|
2.0 KB
|
228
|
18 years
|
Peter |
moved estimation from constructor, added function telling which rows …
|
NNI.h
|
3.3 KB
|
241
|
18 years
|
Jari Häkkinen |
Cleaned up size_t/u_int confusion.
|
PCA.cc
|
7.9 KB
|
227
|
18 years
|
Jari Häkkinen |
Started reimplementation of the vector class.
|
PCA.h
|
3.8 KB
|
42
|
19 years
|
Jari Häkkinen |
Made a major revision of matrix and vector classes. Everything …
|
Pearson.cc
|
2.5 KB
|
187
|
19 years
|
Peter |
fixed bug with inheritance of p_value()
|
Pearson.h
|
2.8 KB
|
187
|
19 years
|
Peter |
fixed bug with inheritance of p_value()
|
PolynomialKernelFunction.cc
|
1.5 KB
|
163
|
19 years
|
Peter |
Design of Kernel class modified
|
PolynomialKernelFunction.h
|
1.5 KB
|
163
|
19 years
|
Peter |
Design of Kernel class modified
|
random_singleton.cc
|
1.1 KB
|
42
|
19 years
|
Jari Häkkinen |
Made a major revision of matrix and vector classes. Everything …
|
random_singleton.h
|
4.6 KB
|
66
|
19 years
|
Peter |
added operator for STL
|
Regression.cc
|
199 bytes
|
235
|
18 years
|
Peter |
Major modifications
|
Regression.h
|
1.5 KB
|
235
|
18 years
|
Peter |
Major modifications
|
RegressionKernel.cc
|
180 bytes
|
205
|
19 years
|
Peter |
RegressionKernel? added
|
RegressionKernel.h
|
480 bytes
|
216
|
18 years
|
Peter |
RegressionLocal? added
|
RegressionKernelBox.cc
|
367 bytes
|
216
|
18 years
|
Peter |
RegressionLocal? added
|
RegressionKernelBox.h
|
561 bytes
|
221
|
18 years
|
Peter |
interface to regression modified
|
RegressionLinear.cc
|
2.4 KB
|
235
|
18 years
|
Peter |
Major modifications
|
RegressionLinear.h
|
3.1 KB
|
253
|
18 years
|
Peter |
modified prediction function in RegressionLocal? to take a ostream
|
RegressionLocal.cc
|
2.4 KB
|
253
|
18 years
|
Peter |
modified prediction function in RegressionLocal? to take a ostream
|
RegressionLocal.h
|
2.1 KB
|
253
|
18 years
|
Peter |
modified prediction function in RegressionLocal? to take a ostream
|
RegressionNaive.cc
|
1.3 KB
|
235
|
18 years
|
Peter |
Major modifications
|
RegressionNaive.h
|
2.3 KB
|
235
|
18 years
|
Peter |
Major modifications
|
ROC.cc
|
4.3 KB
|
187
|
19 years
|
Peter |
fixed bug with inheritance of p_value()
|
ROC.h
|
3.8 KB
|
187
|
19 years
|
Peter |
fixed bug with inheritance of p_value()
|
Score.cc
|
233 bytes
|
186
|
19 years
|
Peter |
Moving Fisher's exact test from Statistics.cc to having its own class …
|
Score.h
|
1.1 KB
|
187
|
19 years
|
Peter |
fixed bug with inheritance of p_value()
|
Statistics.cc
|
1.2 KB
|
196
|
19 years
|
Jari Häkkinen |
Changed Statistics class to statisics namespace.
Fixed other minor issues.
|
Statistics.h
|
2.7 KB
|
201
|
19 years
|
Peter |
doc
|
stl_utility.h
|
877 bytes
|
59
|
19 years
|
Jari Häkkinen |
Fixed minor bug in sort order.
|
SVD.cc
|
1.3 KB
|
227
|
18 years
|
Jari Häkkinen |
Started reimplementation of the vector class.
|
SVD.h
|
3.2 KB
|
227
|
18 years
|
Jari Häkkinen |
Started reimplementation of the vector class.
|
SVM.cc
|
5.3 KB
|
227
|
18 years
|
Jari Häkkinen |
Started reimplementation of the vector class.
|
SVM.h
|
3.2 KB
|
227
|
18 years
|
Jari Häkkinen |
Started reimplementation of the vector class.
|
tScore.cc
|
2.2 KB
|
197
|
19 years
|
Jari Häkkinen |
Cleanup interfaces for Averager classes and move stuff into statsitics …
|
tScore.h
|
1.9 KB
|
187
|
19 years
|
Peter |
fixed bug with inheritance of p_value()
|
vector.cc
|
4.8 KB
|
257
|
18 years
|
Jari Häkkinen |
Added vector views and made vector member functions to be non-member …
|
vector.h
|
10.6 KB
|
257
|
18 years
|
Jari Häkkinen |
Added vector views and made vector member functions to be non-member …
|
WeightedAverager.cc
|
617 bytes
|
197
|
19 years
|
Jari Häkkinen |
Cleanup interfaces for Averager classes and move stuff into statsitics …
|
WeightedAverager.h
|
3.1 KB
|
232
|
18 years
|
Peter |
doc corrected
|
WeNNI.cc
|
1.8 KB
|
233
|
18 years
|
Peter |
function added
|
WeNNI.h
|
1.1 KB
|
246
|
18 years
|
Peter |
only doc
|