| 1 | ## Process this file with automake to produce Makefile.in |
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| 2 | ## |
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| 3 | ## $Id: Makefile.am 2341 2010-10-17 02:30:07Z peter $ |
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| 4 | |
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| 5 | # Copyright (C) 2003 Daniel Dalevi, Jari Häkkinen |
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| 6 | # Copyright (C) 2004 Jari Häkkinen, Peter Johansson, Cecilia Ritz |
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| 7 | # Copyright (C) 2005 Jari Häkkinen, Peter Johansson |
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| 8 | # Copyright (C) 2006, 2007, 2008 Jari Häkkinen, Peter Johansson, Markus Ringnér |
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| 9 | # Copyright (C) 2009, 2010 Peter Johansson |
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| 10 | # |
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| 11 | # This file is part of the yat library, http://dev.thep.lu.se/yat |
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| 12 | # |
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| 13 | # The yat library is free software; you can redistribute it |
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| 14 | # and/or modify it under the terms of the GNU General Public License as |
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| 15 | # published by the Free Software Foundation; either version 3 of the |
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| 16 | # License, or (at your option) any later version. |
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| 17 | # |
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| 18 | # The yat library is distributed in the hope that it will be useful, |
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| 19 | # but WITHOUT ANY WARRANTY; without even the implied warranty of |
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| 20 | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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| 21 | # General Public License for more details. |
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| 22 | # |
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| 23 | # You should have received a copy of the GNU General Public License |
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| 24 | # along with yat. If not, see <http://www.gnu.org/licenses/>. |
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| 25 | |
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| 26 | SUBDIRS = data |
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| 27 | |
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| 28 | ## we use suffix .cc for all source |
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| 29 | AM_DEFAULT_SOURCE_EXT = .cc |
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| 30 | |
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| 31 | noinst_HEADERS = Suite.h |
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| 32 | |
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| 33 | check_LTLIBRARIES = libyattest.la |
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| 34 | |
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| 35 | check_SCRIPTS = common_defs.sh |
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| 36 | |
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| 37 | .PHONY: FORCE |
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| 38 | |
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| 39 | clean-local:; rm -rf yathello testSubDir |
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| 40 | |
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| 41 | FORCE: |
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| 42 | |
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| 43 | yathello: create_yathello.sh $(top_srcdir)/m4/yat.m4 |
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| 44 | ./create_yathello.sh |
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| 45 | |
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| 46 | # testing autoconf macro YAT_CHECK_YAT on an installed yat (the bindir |
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| 47 | # argument requires some care). |
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| 48 | yat_check_yat_test: yathello FORCE |
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| 49 | cd yathello && autoreconf -sivf && \ |
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| 50 | ./configure --with-yat=$(bindir) && $(MAKE) check |
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| 51 | |
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| 52 | EXTRA_PROGRAMS = alignment_test averager_test \ |
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| 53 | commandline_test \ |
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| 54 | concept_test \ |
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| 55 | consensus_inputranker_test data_lookup_1d_test \ |
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| 56 | data_weight_test data_weight_proxy_test distance_test \ |
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| 57 | dna_test ensemble_test feature_selection_test fileutil_test \ |
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| 58 | fisher_test getline_iterator_test histogram_test \ |
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| 59 | igp_test index_test inputranker_test interpolation_test \ |
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| 60 | iterator_test kernel_lookup_test kernel_pca_test kernel_test \ |
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| 61 | knn_test kolmogorov_smirnov_test large_file_test matrix_lookup_test \ |
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| 62 | matrix_lookup_weighted_test matrix_test \ |
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| 63 | matrix_weighted_test merge_test nbc_test \ |
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| 64 | ncc_test nni_test normalization_test pca_test \ |
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| 65 | range_test regression_test rnd_test roc_test \ |
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| 66 | score_test segment_test smart_ptr_test \ |
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| 67 | smoother_test split_test statistics_test stream_redirect_test \ |
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| 68 | subset_generator_test svd_test svm_test \ |
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| 69 | svm_multi_class_test target_test \ |
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| 70 | ttest_test \ |
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| 71 | utility_test vector_test version_test view_test |
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| 72 | |
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| 73 | TESTS = $(EXTRA_PROGRAMS) |
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| 74 | CLEANFILES = $(EXTRA_PROGRAMS) |
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| 75 | |
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| 76 | # tests not passing through yet |
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| 77 | XFAIL_TESTS = |
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| 78 | |
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| 79 | TESTS += documentation_test.sh |
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| 80 | |
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| 81 | DISTRIBUTED_TESTS = \ |
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| 82 | static_test.sh \ |
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| 83 | yat_config_cblas_test.sh \ |
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| 84 | yat_cpp_add_flag_test.sh \ |
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| 85 | yat_cxx_add_flag_test.sh \ |
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| 86 | yat_ld_add_flag_test.sh \ |
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| 87 | yat_lt_link_ifelse_test.sh \ |
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| 88 | yat_m4_test.sh \ |
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| 89 | yat_m4_test2.sh |
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| 90 | |
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| 91 | TESTS += $(DISTRIBUTED_TESTS) |
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| 92 | EXTRA_DIST = $(DISTRIBUTED_TESTS) |
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| 93 | |
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| 94 | TEST_EXTENSIONS = .sh |
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| 95 | |
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| 96 | LDADD = $(top_builddir)/yat/libyat.la libyattest.la $(YAT_LIBS) |
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| 97 | |
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| 98 | libyattest_la_SOURCES = Suite.cc |
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| 99 | |
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| 100 | lazycheck:; $(MAKE) $(AM_MAKEFLAGS) check RECHECK_LOGS= |
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| 101 | |
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| 102 | # dependencies for lazycheck |
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| 103 | static_test.log: $(top_srcdir)/m4/yat.m4 common_defs.sh |
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| 104 | yat_config_cblas_test.log: $(top_builddir)/build_support/yat-config \ |
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| 105 | common_defs.sh |
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| 106 | yat_cpp_add_flag_test.log: $(top_srcdir)/m4/yat_add_flag.m4 \ |
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| 107 | $(top_srcdir)/m4/ax_cxxcpp_check_flag.m4 common_defs.sh |
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| 108 | yat_cxx_add_flag_test.log: $(top_srcdir)/m4/yat_add_flag.m4 \ |
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| 109 | $(top_srcdir)/m4/ax_cxx_check_flag.m4 common_defs.sh |
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| 110 | yat_ld_add_flag_test.log: $(top_srcdir)/m4/yat_add_flag.m4 \ |
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| 111 | $(top_srcdir)/m4/ax_ld_check_flag.m4 common_defs.sh |
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| 112 | yat_m4_test.log:$(top_srcdir)/m4/yat.m4 common_defs.sh \ |
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| 113 | $(top_builddir)/build_support/yat-config |
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| 114 | yat_m4_test2.log:$(top_srcdir)/m4/yat.m4 common_defs.sh |
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| 115 | |
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| 116 | ## We always rerun documentation_test. When sources for doxygen have |
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| 117 | ## not changed and a rerun would not be needed, the test is very |
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| 118 | ## inexpensive because 'make doc' will not run anything, in other |
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| 119 | ## words, we always run the test but let the logic for 'make doc' take |
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| 120 | ## care of whether doxygen will run or not. |
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| 121 | documentation_test.log: FORCE |
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