source: trunk/test/common_defs.sh.in @ 2981

Last change on this file since 2981 was 2981, checked in by Peter, 9 years ago

Skip yat_pc_test.sh when -without-samtools. fixes #748

  • Property svn:eol-style set to native
  • Property svn:keywords set to Id
File size: 4.8 KB
Line 
1# @configure_input@
2# $Id: common_defs.sh.in 2981 2013-02-04 11:24:51Z peter $
3
4# Copyright (C) 2009, 2010, 2011, 2012, 2013 Peter Johansson
5#
6# This file is part of the yat library, http://dev.thep.lu.se/yat
7#
8# The yat library is free software; you can redistribute it
9# and/or modify it under the terms of the GNU General Public License as
10# published by the Free Software Foundation; either version 3 of the
11# License, or (at your option) any later version.
12#
13# The yat library is distributed in the hope that it will be useful,
14# but WITHOUT ANY WARRANTY; without even the implied warranty of
15# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
16# General Public License for more details.
17#
18# You should have received a copy of the GNU General Public License
19# along with yat. If not, see <http://www.gnu.org/licenses/>.
20
21
22# bootstrap a test project
23#
24bootstrap ()
25{
26    rm -rf m4
27    @MKDIR_P@ m4
28    cp @abs_top_srcdir@/m4/*.m4 m4/.
29    rm -f m4/lt*.m4 m4/libtool.m4
30    autoreconf -siv && true
31    res=$?
32    case $res in
33        0)
34            :;;
35        63)
36            exit_skip;;
37        *)
38            exit $res;;
39    esac
40}
41
42# Usage: run PROG EXPECTED_EXITCODE [OPTION]...
43run ()
44{
45    test $# -ge 2 || exit_fatal
46    foo_prog=$1
47    shift
48    expected_exitcode=$1
49    shift
50    exitcode=0
51    $foo_prog ${1+"$@"} > stdout 2>stderr || exitcode=$?
52    cat stderr >&2
53    cat stdout
54    test $exitcode = $expected_exitcode || Exit 1
55}
56
57Exit () { set +x; exit $1; }
58warn_ () { echo $@ >&2; }
59exit_fail () { warn_ "$me: failed test: $@"; Exit 1; }
60exit_fatal () { warn_ "$me: hard error: $@"; Exit 99; }
61exit_skip () { warn_ "$me: skipped test: $@"; Exit 77; }
62exit_success () { echo "$me: successsful test: $@"; Exit 0; }
63
64me=$0
65
66echo "=== Running $me ==="
67
68# if required tool is not available, exit_skip
69if test -n "$required"; then
70  for tool in $required; do
71    case $tool in
72      automake)
73      echo "$me: running $tool --version"
74      ($tool --version) || exit_skip;
75      # skip test if automake older than v1.10
76      version_am=`$tool --version | head -n 1 | cut -f 2 -d ')'`
77      ver_major=`echo ${version_am} | cut -f 1 -d '.'`
78      test ${ver_major} -ge 1 || exit_skip
79      ver_minor=`echo ${version_am} | cut -f 2 -d '.'`
80      test ${ver_major} -gt 1 || test ${ver_minor} -ge 10 || exit_skip
81      ;;
82      doxygen)
83      test @have_doxygen@ = "yes" || exit_skip no doxygen
84      ;;
85      libbam)
86      test @have_libbam@ = "yes" || exit_skip no libbam
87      ;;
88      libtool)
89      # GNU libtool comes as glibtool on Mac OS
90      (echo "$me: running libtool --version" && libtool --version) || \
91      (echo "$me: running glibtool --version" && glibtool --version) || \
92       exit_skip
93      ;;
94      static)
95      if (test "x@enable_static@" = "xno"); then
96        echo static libyat disabled;
97        exit_skip;
98      fi
99      ;;
100      *)
101      echo "$me: running $tool --version"
102      ($tool --version) || exit_skip
103    esac
104  done
105fi
106
107# some defs we need in tests
108test_dir=`echo $me.dir | sed -e 's,.*[\\/],,'`
109test_dir="test/testSubDir/$test_dir"
110abs_top_builddir=@abs_top_builddir@
111abs_top_srcdir=@abs_top_srcdir@
112have_doxygen="@have_doxygen@"
113
114GSL_CONFIG=@GSL_CONFIG@
115
116# user is always right
117test -z "$DOXYGEN" && DOXYGEN="@DOXYGEN@"
118
119rm -rf $test_dir/*
120@MKDIR_P@ --verbose $test_dir
121
122# Taken from Automake 1.11 tests/defs.sh.in
123
124# Unset some MAKE... variables that may cause 'make' to act like a
125# recursively invoked sub-make.  Any 'make' invocation in a test is
126# conceptually an independent invocation, not part of the main
127# 'yat' build.
128unset MFLAGS
129unset MAKEFLAGS
130unset MAKELEVEL
131unset DESTDIR
132unset V
133unset TESTS
134unset TEST_LOGS
135unset RECHECK_LOGS
136unset VERBOSE
137
138cd $test_dir
139
140if (echo "$required" | grep autoconf > /dev/null); then
141echo "creating configure.ac"
142cat > configure.ac <<EOF
143AC_INIT([hello],[1.0])
144AC_CONFIG_SRCDIR([hello.cc])
145AC_CONFIG_MACRO_DIR([m4])
146EOF
147if (echo "$required" | grep automake > /dev/null); then
148echo "AM_INIT_AUTOMAKE([foreign])" >> configure.ac
149fi
150if (echo "$required" | grep libtool > /dev/null); then
151cat >> configure.ac << EOF
152AC_LANG([C++])
153AC_PROG_CXXCPP
154AC_PROG_CXX
155AC_PROG_LIBTOOL
156EOF
157fi
158
159
160echo "creating Makefile.am"
161cat > Makefile.am <<EOF
162ACLOCAL_AMFLAGS = -I m4
163AM_CPPFLAGS = \$(YAT_CPPFLAGS)
164AM_CXXFLAGS = \$(YAT_CXXFLAGS)
165LDADD = \$(YAT_LDADD)
166bin_PROGRAMS = hello
167TESTS = hello
168hello_SOURCES = hello.cc
169EOF
170
171echo "creating hello.cc"
172cat > hello.cc <<EOF
173#include <yat/utility/Vector.h>
174#include <yat/utility/version.h>
175#include <algorithm>
176#include <iostream>
177#include <string>
178int main(void)
179{
180  using namespace theplu::yat;
181  if (utility::version()!="@VERSION@") {
182    std::cerr << "Incorrect version of linked libyat\n";
183    return 1;
184  }
185  // testing something with gsl
186  utility::Vector v(10);
187  v.resize(120);
188  // testing something with boost
189  std::copy(v.begin(), v.begin()+10, v.begin()+10);
190  return 0;
191}
192EOF
193fi #end of creation of autotool files
194
195# turn on shell traces
196set -x
197# remove old core dumps
198rm -f core*
Note: See TracBrowser for help on using the repository browser.