source: trunk/test @ 3069

Name Size Rev Age Author Last Change
../
data 2888   9 years Peter add example SAM file. refs #729
yat-hello 2477   10 years Peter use dir build-aux in yat-hello
alignment2.cc 2.8 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
alignment.cc 4.0 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
averager1.cc 1.2 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
averager3.cc 1.3 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
averager4.cc 4.0 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
averager.cc 14.8 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
bam.cc 6.1 KB 3055   8 years Peter closes #746. New function BamRead::name(1)
bam_header.cc 2.3 KB 2999   8 years Peter closes #739. Two new functions in BamHeader?: tid(string) and parse_region.
bam_iterator.cc 3.6 KB 2986   8 years Peter merge 0.10-stable branch into trunk
bam_pair_analyse.cc 1.7 KB 2943   9 years Peter merge release 0.10 into trunk
bam_read_filter.cc 1.9 KB 2994   8 years Peter new class BamReadFilter?. closes #738
bam_region_iterator.cc 2.6 KB 3056   8 years Peter fixes #764: throw if region in BamReadIterator? is invalid
cmd_test.sh 972 bytes 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
codon.cc 1.8 KB 2919   9 years Peter update copyright years
commandline.cc 18.2 KB 2893   9 years Peter run (also C++) tests in specific test dir so test can create temporary …
concept.cc 2.3 KB 2919   9 years Peter update copyright years
consensus_inputranker.cc 3.1 KB 2919   9 years Peter update copyright years
crossvalidation.cc 2.5 KB 2919   9 years Peter update copyright years
data_lookup_1d.cc 5.6 KB 2919   9 years Peter update copyright years
data_weight.cc 1.6 KB 2919   9 years Peter update copyright years
data_weight_proxy.cc 3.0 KB 2919   9 years Peter update copyright years
defs.sh.in 3.3 KB 3051   8 years Peter simplify code
deleter.cc 1.3 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
distance.cc 8.9 KB 2919   9 years Peter update copyright years
dna.cc 3.4 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
doxygen_test.sh 1.1 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
ensemble.cc 5.7 KB 2919   9 years Peter update copyright years
feature_selection.cc 3.4 KB 2919   9 years Peter update copyright years
fileutil.cc 6.6 KB 2919   9 years Peter update copyright years
fisher.cc 3.8 KB 3004   8 years Peter refs #689. Deprecate Fisher::one_sided_p; implement Fisher::left_p and …
gen_libmy_shared.sh 1.8 KB 3041   8 years Peter fix distcheck issues
gen_libmy_static.sh 1.7 KB 3041   8 years Peter fix distcheck issues
genomic_position.cc 1.4 KB 2919   9 years Peter update copyright years
getline_iterator.cc 2.0 KB 2919   9 years Peter update copyright years
gff.cc 3.1 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
help.cc 1.2 KB 2919   9 years Peter update copyright years
help_test.sh 1.3 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
histogram.cc 2.2 KB 2919   9 years Peter update copyright years
igp.cc 1.4 KB 2919   9 years Peter update copyright years
index.cc 2.7 KB 2919   9 years Peter update copyright years
init.sh 2.5 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
inputranker.cc 1.9 KB 2919   9 years Peter update copyright years
interpolation.cc 3.8 KB 2919   9 years Peter update copyright years
iterator.cc 16.7 KB 3059   8 years Peter add test that we can modify data() and weight() elements via …
kendall.cc 4.0 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
kernel.cc 7.3 KB 2919   9 years Peter update copyright years
kernel_lookup.cc 5.3 KB 2919   9 years Peter update copyright years
kernel_pca.cc 4.3 KB 2919   9 years Peter update copyright years
knn.cc 11.2 KB 2919   9 years Peter update copyright years
kolmogorov_smirnov.cc 7.3 KB 3018   8 years Peter merge patch release 0.10.2 into trunk
large_file.cc 1.5 KB 3050   8 years Peter prefer including as <config.h> rather than "config.h"
Makefile 798 bytes 2749   9 years Peter add small convenience Makefiles in subdirs. closes #703
Makefile.am 10.7 KB 3069   8 years Peter New macro YAT_LT_LINK_LA_IFELSE that tests if we can use code and LIBS …
matrix.cc 7.7 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
matrix_lookup.cc 6.3 KB 2919   9 years Peter update copyright years
matrix_lookup_weighted.cc 3.3 KB 2919   9 years Peter update copyright years
matrix_weighted.cc 3.1 KB 2919   9 years Peter update copyright years
merge.cc 3.3 KB 2919   9 years Peter update copyright years
merge_iterator.cc 3.1 KB 2995   8 years Peter closes #741. New class MergeIterator?
nbc.cc 1.8 KB 2919   9 years Peter update copyright years
ncc.cc 11.4 KB 2919   9 years Peter update copyright years
nni.cc 5.9 KB 2919   9 years Peter update copyright years
normalization.cc 17.3 KB 2919   9 years Peter update copyright years
pca.cc 1.6 KB 2919   9 years Peter update copyright years
queue2.cc 1.9 KB 3063   8 years Peter add another test for new class Queue
queue.cc 1.7 KB 3062   8 years Peter implement copy and assignment (compiler generated does not compile …
range.cc 1.4 KB 2919   9 years Peter update copyright years
README 4.6 KB 2754   9 years Peter avoid suggesting bug reports to trac, prefer single quote (rather than …
regression.cc 16.9 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
rnd.cc 1.9 KB 2919   9 years Peter update copyright years
rng-mt.cc 3.6 KB 2943   9 years Peter merge release 0.10 into trunk
roc.cc 11.6 KB 3006   8 years Peter deprecate ROC::p_value, first versions of p_left and p_right (refs …
score.cc 3.9 KB 2919   9 years Peter update copyright years
segment.cc 8.7 KB 2919   9 years Peter update copyright years
smart_ptr.cc 1.3 KB 2919   9 years Peter update copyright years
smoother.cc 1.6 KB 2919   9 years Peter update copyright years
spearman.cc 4.7 KB 2919   9 years Peter update copyright years
split.cc 2.4 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
static_test.sh 1.4 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
statistics.cc 9.6 KB 2919   9 years Peter update copyright years
stream_redirect.cc 3.7 KB 2919   9 years Peter update copyright years
subset_generator.cc 11.3 KB 2919   9 years Peter update copyright years
Suite.cc 3.7 KB 2919   9 years Peter update copyright years
Suite.h 13.8 KB 2960   9 years Peter merge patch release 0.10.1 into trunk
svd.cc 3.6 KB 2919   9 years Peter update copyright years
svm.cc 4.6 KB 2919   9 years Peter update copyright years
svm_multi_class.cc 4.9 KB 2919   9 years Peter update copyright years
target.cc 3.4 KB 2919   9 years Peter update copyright years
ttest.cc 1.7 KB 3043   8 years Peter avoid using deprecated functions in test
tukey.cc 2.0 KB 2919   9 years Peter update copyright years
utility.cc 17.4 KB 2963   9 years Peter closes #472. Defaut constructors in compose functors.
vector.cc 11.2 KB 2919   9 years Peter update copyright years
version.cc 1.8 KB 2943   9 years Peter merge release 0.10 into trunk
view.cc 4.2 KB 2919   9 years Peter update copyright years
yat_config_cblas_test.sh 1.0 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_config_test.sh 1.2 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_cpp_add_flag_test.sh 1.6 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_cxx_add_flag_test.sh 1.4 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_have_svn_wc_test.sh 1.1 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_ld_add_flag_test.sh 1.5 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_lt_compile_ifelse_test.sh 1.5 KB 3069   8 years Peter New macro YAT_LT_LINK_LA_IFELSE that tests if we can use code and LIBS …
yat_lt_link_ifelse_test.sh 2.4 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_lt_link_la_ifelse_test.sh 1.6 KB 3069   8 years Peter New macro YAT_LT_LINK_LA_IFELSE that tests if we can use code and LIBS …
yat_m4_test2.sh 1.5 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_m4_test.sh 1.7 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_m4_with_bam_test.sh 1.3 KB 3053   8 years Peter refs #757. new macro linking against bam stuff in libyat
yat_msg_error_test2.sh 1.1 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_msg_error_test.sh 1.5 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_pc_test.sh 2.3 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_prog_move_if_change_test.sh 1.2 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_revision_header_test.sh 1.5 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_svn_release_year_test.sh 1.8 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_svn_revision_test.sh 1.3 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_use_libtool_tag_test.sh 1.4 KB 3036   8 years Peter common_defs does two things: 1) init test scripts 2) defines some …
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