source: trunk/test @ 3100

Name Size Rev Age Author Last Change
../
data 2888   10 years Peter add example SAM file. refs #729
yat-hello 2477   11 years Peter use dir build-aux in yat-hello
alignment2.cc 2.8 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
alignment.cc 4.0 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
averager1.cc 1.2 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
averager3.cc 1.3 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
averager4.cc 4.0 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
averager.cc 14.8 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
bam.cc 6.1 KB 3055   9 years Peter closes #746. New function BamRead::name(1)
bam_header.cc 2.3 KB 2999   9 years Peter closes #739. Two new functions in BamHeader?: tid(string) and parse_region.
bam_iterator.cc 3.6 KB 2986   9 years Peter merge 0.10-stable branch into trunk
bam_pair_analyse.cc 1.7 KB 2943   10 years Peter merge release 0.10 into trunk
bam_read_filter.cc 1.9 KB 2994   9 years Peter new class BamReadFilter?. closes #738
bam_region_iterator.cc 2.6 KB 3056   9 years Peter fixes #764: throw if region in BamReadIterator? is invalid
cmd_test.sh 972 bytes 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
codon.cc 1.8 KB 2919   10 years Peter update copyright years
commandline.cc 18.2 KB 2893   10 years Peter run (also C++) tests in specific test dir so test can create temporary …
concept.cc 2.3 KB 2919   10 years Peter update copyright years
consensus_inputranker.cc 3.1 KB 2919   10 years Peter update copyright years
crossvalidation.cc 2.5 KB 2919   10 years Peter update copyright years
data_lookup_1d.cc 5.6 KB 2919   10 years Peter update copyright years
data_weight.cc 1.6 KB 2919   10 years Peter update copyright years
data_weight_proxy.cc 3.0 KB 2919   10 years Peter update copyright years
defs.sh.in 3.6 KB 3100   9 years Peter SKIP test when shared or static libs is not available
deleter.cc 1.3 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
distance.cc 8.9 KB 2919   10 years Peter update copyright years
dna.cc 3.4 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
doxygen_test.sh 1.1 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
ensemble.cc 5.7 KB 2919   10 years Peter update copyright years
feature_selection.cc 3.4 KB 2919   10 years Peter update copyright years
fileutil.cc 6.6 KB 2919   10 years Peter update copyright years
fisher.cc 3.8 KB 3004   9 years Peter refs #689. Deprecate Fisher::one_sided_p; implement Fisher::left_p and …
gen_libmy_shared.sh 1.8 KB 3041   9 years Peter fix distcheck issues
gen_libmy_static.sh 1.7 KB 3041   9 years Peter fix distcheck issues
genomic_position.cc 1.4 KB 2919   10 years Peter update copyright years
getline_iterator.cc 2.0 KB 2919   10 years Peter update copyright years
gff.cc 3.1 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
help.cc 1.2 KB 2919   10 years Peter update copyright years
help_test.sh 1.3 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
histogram.cc 2.2 KB 2919   10 years Peter update copyright years
igp.cc 1.4 KB 2919   10 years Peter update copyright years
index.cc 2.7 KB 2919   10 years Peter update copyright years
init.sh 2.5 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
inputranker.cc 1.9 KB 2919   10 years Peter update copyright years
interpolation.cc 3.8 KB 2919   10 years Peter update copyright years
iterator.cc 16.7 KB 3059   9 years Peter add test that we can modify data() and weight() elements via …
kendall.cc 4.0 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
kernel.cc 7.3 KB 2919   10 years Peter update copyright years
kernel_lookup.cc 5.3 KB 2919   10 years Peter update copyright years
kernel_pca.cc 4.3 KB 2919   10 years Peter update copyright years
knn.cc 11.2 KB 2919   10 years Peter update copyright years
kolmogorov_smirnov.cc 7.3 KB 3018   9 years Peter merge patch release 0.10.2 into trunk
large_file.cc 1.5 KB 3050   9 years Peter prefer including as <config.h> rather than "config.h"
Makefile 798 bytes 2749   10 years Peter add small convenience Makefiles in subdirs. closes #703
Makefile.am 10.8 KB 3099   9 years Peter make rule for bams silent when in silent mode
matrix.cc 7.7 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
matrix_lookup.cc 6.3 KB 2919   10 years Peter update copyright years
matrix_lookup_weighted.cc 3.3 KB 2919   10 years Peter update copyright years
matrix_weighted.cc 3.1 KB 2919   10 years Peter update copyright years
merge.cc 3.3 KB 2919   10 years Peter update copyright years
merge_iterator.cc 3.1 KB 2995   9 years Peter closes #741. New class MergeIterator?
nbc.cc 1.8 KB 2919   10 years Peter update copyright years
ncc.cc 11.4 KB 2919   10 years Peter update copyright years
nni.cc 5.9 KB 2919   10 years Peter update copyright years
normalization.cc 17.3 KB 2919   10 years Peter update copyright years
pca.cc 1.6 KB 2919   10 years Peter update copyright years
queue2.cc 1.9 KB 3063   9 years Peter add another test for new class Queue
queue.cc 1.7 KB 3062   9 years Peter implement copy and assignment (compiler generated does not compile …
range.cc 1.4 KB 2919   10 years Peter update copyright years
README 4.6 KB 2754   10 years Peter avoid suggesting bug reports to trac, prefer single quote (rather than …
regression.cc 16.9 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
rnd.cc 1.9 KB 2919   10 years Peter update copyright years
rng-mt.cc 3.6 KB 2943   10 years Peter merge release 0.10 into trunk
roc.cc 11.6 KB 3006   9 years Peter deprecate ROC::p_value, first versions of p_left and p_right (refs …
score.cc 3.9 KB 2919   10 years Peter update copyright years
segment.cc 8.7 KB 2919   10 years Peter update copyright years
smart_ptr.cc 1.3 KB 2919   10 years Peter update copyright years
smoother.cc 1.6 KB 2919   10 years Peter update copyright years
spearman.cc 4.7 KB 2919   10 years Peter update copyright years
split.cc 2.4 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
static_test.sh 1.4 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
statistics.cc 9.6 KB 2919   10 years Peter update copyright years
stream_redirect.cc 3.7 KB 2919   10 years Peter update copyright years
subset_generator.cc 11.3 KB 2919   10 years Peter update copyright years
Suite.cc 3.7 KB 2919   10 years Peter update copyright years
Suite.h 13.8 KB 2960   10 years Peter merge patch release 0.10.1 into trunk
svd.cc 3.6 KB 2919   10 years Peter update copyright years
svm.cc 4.6 KB 2919   10 years Peter update copyright years
svm_multi_class.cc 4.9 KB 2919   10 years Peter update copyright years
target.cc 3.4 KB 2919   10 years Peter update copyright years
ttest.cc 1.7 KB 3043   9 years Peter avoid using deprecated functions in test
tukey.cc 2.0 KB 2919   10 years Peter update copyright years
utility.cc 17.9 KB 3098   9 years Peter merge release 0.10.3 into trunk
vector.cc 11.2 KB 2919   10 years Peter update copyright years
version.cc 1.8 KB 2943   10 years Peter merge release 0.10 into trunk
view.cc 4.2 KB 2919   10 years Peter update copyright years
yat_config_cblas_test.sh 1.0 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_config_test.sh 1.2 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_cpp_add_flag_test.sh 1.6 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_cxx_add_flag_test.sh 1.4 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_have_svn_wc_test.sh 1.1 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_ld_add_flag_test.sh 1.5 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_lt_compile_ifelse_test.sh 1.5 KB 3069   9 years Peter New macro YAT_LT_LINK_LA_IFELSE that tests if we can use code and LIBS …
yat_lt_link_ifelse_test.sh 2.4 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_lt_link_la_ifelse_test.sh 1.7 KB 3100   9 years Peter SKIP test when shared or static libs is not available
yat_m4_test2.sh 1.5 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_m4_test.sh 1.7 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_m4_with_bam_test.sh 1.3 KB 3053   9 years Peter refs #757. new macro linking against bam stuff in libyat
yat_msg_error_test2.sh 1.1 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_msg_error_test.sh 1.5 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_pc_test.sh 2.3 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_prog_move_if_change_test.sh 1.2 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_revision_header_test.sh 1.5 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_svn_release_year_test.sh 1.8 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_svn_revision_test.sh 1.3 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
yat_use_libtool_tag_test.sh 1.4 KB 3036   9 years Peter common_defs does two things: 1) init test scripts 2) defines some …
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