source: trunk/yat/omic @ 2897

Name Size Rev Age Author Last Change
../
BamFile.cc 2.7 KB 2897   10 years Peter prefer throwing yat::utility::runtime_error. refs #729
BamFile.h 4.7 KB 2897   10 years Peter prefer throwing yat::utility::runtime_error. refs #729
BamHeader.cc 1.1 KB 2883   10 years Peter New classes to wrap around functionality provided by samtools. refs #729
BamHeader.h 1.5 KB 2884   10 years Peter add missing since tags. refs #729
BamRead.cc 5.2 KB 2886   10 years Peter fast swap for BamRead?
BamRead.h 6.2 KB 2887   10 years Peter docs typo
BamReadIterator.cc 2.6 KB 2897   10 years Peter prefer throwing yat::utility::runtime_error. refs #729
BamReadIterator.h 3.8 KB 2896   10 years Peter improve doc and remove private classes from docs
BamWriteIterator.cc 1.1 KB 2883   10 years Peter New classes to wrap around functionality provided by samtools. refs #729
BamWriteIterator.h 2.2 KB 2884   10 years Peter add missing since tags. refs #729
Codon.cc 3.9 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
Codon.h 3.8 KB 2441   12 years Peter docs typo
DNA.cc 2.8 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
DNA.h 4.3 KB 2743   11 years Peter correct doc typo
GenomicPosition.cc 2.1 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
GenomicPosition.h 3.3 KB 2389   12 years Peter adding some missing since tags
GFF2.cc 1.2 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
GFF2.h 1.1 KB 2482   12 years Peter new class GFF. closes #647
GFF3.cc 1.1 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
GFF3.h 1.1 KB 2482   12 years Peter new class GFF. closes #647
GFF.cc 3.6 KB 2881   10 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
GFF.h 3.3 KB 2576   11 years Peter avoid warning with doxygen 1.7.5.1
Makefile 786 bytes 2824   10 years Peter remove intermediate libraries. Makefiles in corresponding …
Makefile.am 1.9 KB 2891   10 years Peter check for samtools in configure; create bam file in 'make check' if we …
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