source: trunk/yat/omic @ 2919

Name Size Rev Age Author Last Change
../
algorithm.h 3.5 KB 2905   9 years Peter remove superfluous 'using'
BamFile.cc 2.7 KB 2897   9 years Peter prefer throwing yat::utility::runtime_error. refs #729
BamFile.h 4.7 KB 2897   9 years Peter prefer throwing yat::utility::runtime_error. refs #729
BamHeader.cc 1.1 KB 2883   9 years Peter New classes to wrap around functionality provided by samtools. refs #729
BamHeader.h 1.5 KB 2884   9 years Peter add missing since tags. refs #729
BamRead.cc 5.2 KB 2886   9 years Peter fast swap for BamRead?
BamRead.h 6.2 KB 2911   9 years Peter accidently included in r2910
BamReadIterator.cc 2.6 KB 2897   9 years Peter prefer throwing yat::utility::runtime_error. refs #729
BamReadIterator.h 3.8 KB 2896   9 years Peter improve doc and remove private classes from docs
BamWriteIterator.cc 1.1 KB 2883   9 years Peter New classes to wrap around functionality provided by samtools. refs #729
BamWriteIterator.h 2.3 KB 2910   9 years Peter improve docs. closes #729
Codon.cc 3.9 KB 2919   9 years Peter update copyright years
Codon.h 3.8 KB 2919   9 years Peter update copyright years
DNA.cc 2.8 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
DNA.h 4.3 KB 2743   10 years Peter correct doc typo
GenomicPosition.cc 2.1 KB 2919   9 years Peter update copyright years
GenomicPosition.h 3.3 KB 2919   9 years Peter update copyright years
GFF2.cc 1.2 KB 2919   9 years Peter update copyright years
GFF2.h 1.1 KB 2919   9 years Peter update copyright years
GFF3.cc 1.1 KB 2919   9 years Peter update copyright years
GFF3.h 1.1 KB 2482   11 years Peter new class GFF. closes #647
GFF.cc 3.6 KB 2881   9 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
GFF.h 3.3 KB 2576   10 years Peter avoid warning with doxygen 1.7.5.1
Makefile 786 bytes 2824   9 years Peter remove intermediate libraries. Makefiles in corresponding …
Makefile.am 2.0 KB 2899   9 years Peter function bam_pair_analyse
Note: See TracBrowser for help on using the repository browser.