1 | // $Id: Local.cc 1486 2008-09-09 21:17:19Z jari $ |
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2 | |
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3 | /* |
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4 | Copyright (C) 2004 Peter Johansson |
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5 | Copyright (C) 2005, 2006, 2007 Jari Häkkinen, Peter Johansson |
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6 | Copyright (C) 2008 Peter Johansson |
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7 | |
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8 | This file is part of the yat library, http://dev.thep.lu.se/yat |
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9 | |
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10 | The yat library is free software; you can redistribute it and/or |
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11 | modify it under the terms of the GNU General Public License as |
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12 | published by the Free Software Foundation; either version 3 of the |
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13 | License, or (at your option) any later version. |
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14 | |
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15 | The yat library is distributed in the hope that it will be useful, |
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16 | but WITHOUT ANY WARRANTY; without even the implied warranty of |
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17 | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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18 | General Public License for more details. |
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19 | |
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20 | You should have received a copy of the GNU General Public License |
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21 | along with this program; if not, write to the Free Software |
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22 | Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA |
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23 | 02111-1307, USA. |
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24 | */ |
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25 | |
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26 | #include "Local.h" |
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27 | #include "Kernel.h" |
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28 | #include "OneDimensionalWeighted.h" |
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29 | #include "yat/utility/Vector.h" |
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30 | #include "yat/utility/VectorView.h" |
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31 | |
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32 | #include <algorithm> |
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33 | #include <cassert> |
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34 | #include <iostream> |
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35 | #include <sstream> |
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36 | #include <stdexcept> |
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37 | |
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38 | namespace theplu { |
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39 | namespace yat { |
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40 | namespace regression { |
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41 | |
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42 | Local::Local(OneDimensionalWeighted& r, Kernel& k) |
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43 | : kernel_(&k), regressor_(&r) |
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44 | { |
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45 | } |
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46 | |
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47 | Local::~Local(void) |
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48 | { |
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49 | } |
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50 | |
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51 | void Local::add(const double x, const double y) |
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52 | { |
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53 | data_.push_back(std::make_pair(x,y)); |
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54 | } |
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55 | |
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56 | void Local::fit(const size_t step_size, const size_t nof_points) |
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57 | { |
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58 | if (step_size==0){ |
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59 | std::stringstream ss; |
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60 | ss << "yat::regression::Local: step_size must be larger than zero."; |
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61 | throw std::runtime_error(ss.str()); |
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62 | } |
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63 | if (nof_points<3){ |
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64 | std::stringstream ss; |
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65 | ss << "yat::regression::Local: too few data points. " |
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66 | << "At least 3 data points are needed to perform fitting."; |
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67 | throw std::runtime_error(ss.str()); |
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68 | } |
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69 | if (data_.size()<step_size){ |
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70 | std::stringstream ss; |
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71 | ss << "yat::regression::Local: too large step_size " |
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72 | << "step_size, " << step_size |
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73 | << ", is larger than number of added data points " << data_.size(); |
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74 | throw std::runtime_error(ss.str()); |
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75 | } |
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76 | |
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77 | size_t nof_fits=data_.size()/step_size; |
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78 | x_.resize(nof_fits); |
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79 | y_predicted_.resize(x_.size()); |
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80 | y_err_.resize(x_.size()); |
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81 | sort(data_.begin(), data_.end()); |
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82 | |
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83 | // copying data to 2 utility vectors ONCE to use views from |
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84 | utility::Vector x(data_.size()); |
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85 | utility::Vector y(data_.size()); |
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86 | for (size_t j=0; j<x.size(); j++){ |
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87 | x(j)=data_[j].first; |
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88 | y(j)=data_[j].second; |
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89 | } |
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90 | |
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91 | // looping over regression points and perform local regression |
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92 | for (size_t i=0; i<nof_fits; i++) { |
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93 | size_t max_index = static_cast<size_t>( (i+0.5)*step_size ); |
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94 | size_t min_index; |
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95 | double width; // distance from middle of windo to border of window |
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96 | double x_mid; // middle of window |
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97 | // right border case |
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98 | if (max_index > data_.size()-1){ |
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99 | min_index = max_index - nof_points + 1; |
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100 | max_index = data_.size()-1; |
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101 | width = ( (( x(max_index)-x(0) )*(nof_points-1)) / |
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102 | ( 2*(max_index-min_index)) ); |
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103 | x_mid = x(min_index)+width; |
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104 | } |
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105 | // normal middle case |
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106 | else if (max_index > nof_points-1){ |
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107 | min_index = max_index - nof_points + 1; |
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108 | width = (x(max_index)-x(min_index))/2; |
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109 | x_mid = x(min_index)+width; |
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110 | } |
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111 | // left border case |
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112 | else { |
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113 | min_index = 0; |
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114 | width = ( (( x(max_index)-x(0) )*(nof_points-1)) / |
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115 | ( 2*(max_index-min_index)) ); |
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116 | x_mid = x(max_index)-width; |
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117 | } |
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118 | assert(min_index<data_.size()); |
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119 | assert(max_index<data_.size()); |
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120 | |
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121 | utility::VectorView x_local(x, min_index, max_index-min_index+1); |
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122 | utility::VectorView y_local(y, min_index, max_index-min_index+1); |
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123 | |
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124 | // calculating weights |
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125 | utility::Vector w(max_index-min_index+1); |
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126 | for (size_t j=0; j<w.size(); j++) |
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127 | w(j) = (*kernel_)( (x_local(j)- x_mid)/width ); |
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128 | |
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129 | // fitting the regressor locally |
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130 | regressor_->fit(x_local,y_local,w); |
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131 | assert(i<y_predicted_.size()); |
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132 | assert(i<y_err_.size()); |
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133 | x_(i) = x(i*step_size); |
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134 | y_predicted_(i) = regressor_->predict(x(i*step_size)); |
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135 | y_err_(i) = sqrt(regressor_->standard_error2(x(i*step_size))); |
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136 | } |
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137 | } |
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138 | |
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139 | |
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140 | void Local::reset(void) |
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141 | { |
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142 | data_.clear(); |
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143 | x_.resize(0); |
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144 | y_predicted_.resize(0); |
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145 | y_err_.resize(0); |
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146 | } |
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147 | |
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148 | |
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149 | const utility::Vector& Local::x(void) const |
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150 | { |
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151 | return x_; |
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152 | } |
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153 | |
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154 | const utility::Vector& Local::y_predicted(void) const |
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155 | { |
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156 | return y_predicted_; |
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157 | } |
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158 | |
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159 | const utility::Vector& Local::y_err(void) const |
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160 | { |
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161 | return y_err_; |
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162 | } |
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163 | |
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164 | std::ostream& operator<<(std::ostream& os, const Local& r) |
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165 | { |
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166 | os << "# column 1: x\n" |
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167 | << "# column 2: y\n" |
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168 | << "# column 3: y_err\n"; |
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169 | for (size_t i=0; i<r.x().size(); i++) { |
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170 | os << r.x()(i) << "\t" |
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171 | << r.y_predicted()(i) << "\t" |
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172 | << r.y_err()(i) << "\n"; |
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173 | } |
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174 | |
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175 | return os; |
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176 | } |
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177 | |
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178 | }}} // of namespaces regression, yat, and theplu |
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