source: trunk/yat/utility/MatrixWeighted.h @ 1583

#ifndef _theplu_yat_utility_matrix_weighted_
#define _theplu_yat_utility_matrix_weighted_

// $Id: MatrixWeighted.h 1583 2008-10-15 18:29:47Z peter $

/*
  Copyright (C) 2003 Daniel Dalevi, Peter Johansson
  Copyright (C) 2004 Jari Häkkinen, Peter Johansson
  Copyright (C) 2005, 2006 Jari Häkkinen, Peter Johansson, Markus Ringnér
  Copyright (C) 2007, 2008 Jari Häkkinen, Peter Johansson

  This file is part of the yat library, http://dev.thep.lu.se/yat

  The yat library is free software; you can redistribute it and/or
  modify it under the terms of the GNU General Public License as
  published by the Free Software Foundation; either version 3 of the
  License, or (at your option) any later version.

  The yat library is distributed in the hope that it will be useful,
  but WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
  General Public License for more details.

  You should have received a copy of the GNU General Public License
  along with yat. If not, see <http://www.gnu.org/licenses/>.
*/

#include "DataWeight.h"
#include "StrideIterator.h"

#include <vector>

namespace theplu {
namespace yat {
namespace utility {

  class Matrix;

  ///
  /// @brief Weighted Matrix
  ///
  class MatrixWeighted
  {
  public:
    /**
       value_type is DataWeight

       \since New in yat 0.5
     */
    typedef DataWeight value_type;

    /**
       reference type is DataWeight&
     */
    typedef DataWeight& reference;

    /**
       const_reference type is const DataWeight&
     */
    typedef const DataWeight& const_reference;

    /**
       Mutable iterator that iterates over all elements
     */
    typedef std::vector<DataWeight>::iterator iterator;

    /**
       Read-only iterator that iterates over all elements
     */
    typedef std::vector<DataWeight>::const_iterator const_iterator;

    /**
       Mutable iterator that iterates over one column
     */
    typedef StrideIterator<std::vector<DataWeight>::iterator> column_iterator;

    /**
       Read-only iterator that iterates over one column
     */
    typedef StrideIterator<std::vector<DataWeight>::const_iterator> 
    const_column_iterator;

    /**
       Mutable iterator that iterates over one row
     */
    typedef std::vector<DataWeight>::iterator row_iterator;

    /**
       Read-only iterator that iterates over one row
     */
    typedef std::vector<DataWeight>::const_iterator const_row_iterator;

    /**
       @brief The default constructor.
    
       This contructor does not initialize underlying (essential)
       structures.
    */
    MatrixWeighted(void);

    /**
       \brief Constructor allocating memory space for \a r times \a c
       elements, and sets all elements to 
       DataWeight(\a init_value, \a init_weight)
    */
    MatrixWeighted(size_t r, size_t c, double init_value=0,
                   double init_weight=1.0);

    /**
       \brief The copy constructor.
    */
    MatrixWeighted(const MatrixWeighted&);

    
    /**
       \brief The istream constructor.

       Data is copied from \a other and weights are calculated using
       the nan function.
    */
    explicit MatrixWeighted(const Matrix& other);

    /**
       \brief The istream constructor.

       This constructor first creates a Matrix using the istream
       constructor, and then constructs MatrixWeighted using
       MatrixWeighted(const Matrix&).
    */
    explicit MatrixWeighted(std::istream &, char sep='\0'); 

    /**
       Iterator iterates along a row. When end of row is reached it
       jumps to beginning of next row.

       \return iterator pointing to upper-left element.
     */
    iterator begin(void);

    /**
       Iterator iterates along a row. When end of row is reached it
       jumps to beginning of next row.

       \return const_iterator pointing to upper-left element.
     */
    const_iterator begin(void) const;

    /**
       Iterator iterates along a column.

       \return iterator pointing to first element of column \a i.
     */
    column_iterator begin_column(size_t i);

    /**
       Iterator iterates along a column.

       \return const_iterator pointing to first element of column \a i.
     */
    const_column_iterator begin_column(size_t i) const;

    /**
       Iterator iterates along a row.

       \return iterator pointing to first element of row \a i.
     */
    row_iterator begin_row(size_t i);

    /**
       Iterator iterates along a row.

       \return const_iterator pointing to first element of row \a i.
     */
    const_row_iterator begin_row(size_t i) const;

    /**
       \return The number of columns in the matrix.
    */
    size_t columns(void) const;

    /**
       \return iterator pointing to end of matrix
     */
    iterator end(void);

    /**
       \return const_iterator pointing to end of matrix
     */
    const_iterator end(void) const;

    /**
       \return iterator pointing to end of column \a i
     */
    column_iterator end_column(size_t i);

    /**
       \return const_iterator pointing to end of column \a i
     */
    const_column_iterator end_column(size_t i) const;

    /**
       \return iterator pointing to end of row \a i
     */
    row_iterator end_row(size_t i);

    /**
       \return const_iterator pointing to end of row \a i
     */
    const_row_iterator end_row(size_t i) const;

    /**
       \brief Resize Matrix

       \note this function may invalidate iterators.
    */
    void resize(size_t, size_t);

    /**
       \return The number of rows in the matrix.
    */
    size_t rows(void) const;

    /**
       \brief Element access operator.

       \return Reference to the element position (\a row, \a column).
    */
    DataWeight& operator()(size_t row,size_t column);

    /**
       \brief Element access operator.

       \return Const reference to the element position (\a row, \a
       column).
    */
    const DataWeight& operator()(size_t row,size_t column) const;


    /**
       \brief The assignment operator.

       \return A const reference to the resulting Matrix.
    */
    const MatrixWeighted& operator=(const MatrixWeighted& other);

  private:
    void copy(const Matrix&);
    void copy(const Matrix& data, const Matrix& weight);

    std::vector<DataWeight> vec_;
    size_t columns_;

  };

  /**
     \brief Exchange all elements.

     Takes constant time.

     \throw std::runtime_error if the two matrices disagree in size.
  */
  void swap(MatrixWeighted&, MatrixWeighted&);

}}} // of namespace utility, yat, and theplu

#endif