source:
trunk/yat/utility
@
4117
| Name | Size | Rev | Age | Author | Last Change |
|---|---|---|---|---|---|
| ../ | |||||
| expression | 3999 | 20 months | update copyright years | ||
| ranking | 4087 | 9 months | extend docs; closes #710 | ||
| Makefile | 786 bytes | 2824 | 10 years | remove intermediate libraries. Makefiles in corresponding … | |
| Deleter.cc | 995 bytes | 2881 | 10 years | Define PP variables in config.h rather than in CPPFLAGS. Include … | |
| BLAS_utility.h | 1016 bytes | 3605 | 5 years | A first go at implementing template expression in order to provide … | |
| version.cc | 1.2 KB | 2919 | 9 years | update copyright years | |
| stl_utility.cc | 1.3 KB | 2919 | 9 years | update copyright years | |
| OptionInFile.cc | 1.5 KB | 2919 | 9 years | update copyright years | |
| OptionOutFile.cc | 1.5 KB | 2919 | 9 years | update copyright years | |
| GetlineIterator.cc | 1.5 KB | 3330 | 8 years | update copyright years | |
| split.cc | 1.6 KB | 2881 | 10 years | Define PP variables in config.h rather than in CPPFLAGS. Include … | |
| SegmentMap.h | 1.6 KB | 2992 | 9 years | set svndigest:ignore proprty to reflect when files were initially … | |
| Exception.cc | 1.7 KB | 4089 | 9 months | updating copyright years | |
| Deleter.h | 1.7 KB | 4089 | 9 months | updating copyright years | |
| OptionHelp.cc | 1.7 KB | 2919 | 9 years | update copyright years | |
| deprecate.h | 1.8 KB | 3295 | 8 years | merge release 0.12 into trunk | |
| TypeInfo.cc | 1.8 KB | 2919 | 9 years | update copyright years | |
| split.h | 1.8 KB | 2898 | 9 years | dox typo | |
| OptionSwitch.cc | 1.9 KB | 2919 | 9 years | update copyright years | |
| DataWeight.cc | 1.9 KB | 2919 | 9 years | update copyright years | |
| OptionSwitch.h | 2.0 KB | 2119 | 12 years | converted files to utf-8. fixes #577 | |
| BasicVector.h | 2.0 KB | 3605 | 5 years | A first go at implementing template expression in order to provide … | |
| BinaryOstreamIterator.h | 2.0 KB | 3902 | 2 years | closes #915. New functions that read and write numbers in binary format. | |
| round.h | 2.1 KB | 4059 | 13 months | new function: round, which is rounding elements in a range with the … | |
| OptionInFile.h | 2.1 KB | 2121 | 12 years | updating copyrights to uniform encoding in them. | |
| OptionOutFile.h | 2.1 KB | 3330 | 8 years | update copyright years | |
| Index.cc | 2.1 KB | 2919 | 9 years | update copyright years | |
| KernelPCA.cc | 2.2 KB | 3519 | 6 years | remove trailing ws | |
| Alignment.cc | 2.3 KB | 2881 | 10 years | Define PP variables in config.h rather than in CPPFLAGS. Include … | |
| version.h | 2.3 KB | 2992 | 9 years | set svndigest:ignore proprty to reflect when files were initially … | |
| kNNI.h | 2.3 KB | 2119 | 12 years | converted files to utf-8. fixes #577 | |
| yat_assert.h | 2.3 KB | 3188 | 8 years | merge patch release 0.11.2 | |
| BinaryIstreamIterator.h | 2.4 KB | 3902 | 2 years | closes #915. New functions that read and write numbers in binary format. | |
| ColumnStream.h | 2.4 KB | 3330 | 8 years | update copyright years | |
| OptionFile.h | 2.5 KB | 2119 | 12 years | converted files to utf-8. fixes #577 | |
| OptionFile.cc | 2.5 KB | 3114 | 9 years | update copyright years | |
| Index.h | 2.5 KB | 2119 | 12 years | converted files to utf-8. fixes #577 | |
| SmithWaterman.cc | 2.5 KB | 3212 | 8 years | move Cigar defines to a separate file | |
| BasicMatrix.cc | 2.5 KB | 3999 | 20 months | update copyright years | |
| TypeInfo.h | 2.6 KB | 2119 | 12 years | converted files to utf-8. fixes #577 | |
| Cigar.cc | 2.6 KB | 4003 | 20 months | Add a constructor Aligner::Cigar(string) (closes #962) Add a function … | |
| config_public.h.in | 2.6 KB | 4104 | 8 months | make doxygen happy | |
| KernelPCA.h | 2.6 KB | 3661 | 5 years | update copyright years | |
| WeNNI.h | 2.7 KB | 2526 | 11 years | update copyright years | |
| FileUtil.cc | 2.7 KB | 3670 | 5 years | update copyright years | |
| VectorConstView.cc | 2.7 KB | 3661 | 5 years | update copyright years | |
| GetlineIterator.h | 2.7 KB | 3210 | 8 years | update copyright years | |
| kNNI.cc | 2.8 KB | 2919 | 9 years | update copyright years | |
| OptionHelp.h | 2.8 KB | 2119 | 12 years | converted files to utf-8. fixes #577 | |
| Queue.h | 2.9 KB | 3999 | 20 months | update copyright years | |
| DataWeight.h | 2.9 KB | 2119 | 12 years | converted files to utf-8. fixes #577 | |
| WeNNI.cc | 2.9 KB | 2919 | 9 years | update copyright years | |
| Exception.h | 3.0 KB | 4089 | 9 months | updating copyright years | |
| SVD.cc | 3.0 KB | 3999 | 20 months | update copyright years | |
| BasicMatrix.h | 3.0 KB | 3651 | 5 years | ||
| Option.cc | 3.0 KB | 2919 | 9 years | update copyright years | |
| BLAS_level2.h | 3.1 KB | 3999 | 20 months | update copyright years | |
| NNI.cc | 3.1 KB | 2919 | 9 years | update copyright years | |
| PCA.cc | 3.2 KB | 3938 | 23 months | let configure fail if compiler is not a C++11 compiler. … | |
| getvector.h | 3.3 KB | 4096 | 8 months | simplify code and alter private interface to reflect what's going on inside | |
| FileUtil.h | 3.3 KB | 2125 | 12 years | fixes #575 - allow copy of FileUtil? | |
| Cigar.h | 3.3 KB | 4005 | 20 months | int8_t needs <cstdint> when sam.h isn't included | |
| MatrixExpression.h | 3.4 KB | 3938 | 23 months | let configure fail if compiler is not a C++11 compiler. … | |
| PCA.h | 3.4 KB | 3999 | 20 months | update copyright years | |
| SmartPtr.h | 3.5 KB | 3992 | 20 months | recommend std rather than boost | |
| ColumnStream.cc | 3.5 KB | 3330 | 8 years | update copyright years | |
| DataIterator.h | 3.5 KB | 3550 | 5 years | Update copyright years. Happy New Year | |
| PriorityQueue.h | 3.6 KB | 3999 | 20 months | update copyright years | |
| SortedBuffer.h | 3.6 KB | 4057 | 14 months | closes #798; new classes BamPairBuffer? and a more general SortedBuffer?. | |
| OstreamIterator.h | 3.6 KB | 3154 | 8 years | Happy New 2014 | |
| Container2DIterator.h | 3.6 KB | 3417 | 7 years | updating copyright statements | |
| Option.h | 3.7 KB | 2384 | 11 years | updating copyright years | |
| WeightIterator.h | 3.7 KB | 3550 | 5 years | Update copyright years. Happy New Year | |
| SVD.h | 3.8 KB | 3938 | 23 months | let configure fail if compiler is not a C++11 compiler. … | |
| VectorView.cc | 3.8 KB | 3623 | 5 years | merge release 0.14.1 into trunk move functions 'create_gsl_vector' … | |
| VectorConstView.h | 3.8 KB | 3661 | 5 years | update copyright years | |
| VectorExpression.h | 3.8 KB | 3999 | 20 months | update copyright years | |
| DiagonalMatrix.cc | 3.8 KB | 4105 | 8 months | implement +=, -=, and *= operators for DiagonalMatrix?; prefer using … | |
| CigarIterator.h | 3.9 KB | 3792 | 3 years | update copyright years | |
| Alignment.h | 4.1 KB | 3210 | 8 years | update copyright years | |
| StrideIterator.h | 4.3 KB | 3550 | 5 years | Update copyright years. Happy New Year | |
| BLAS_level1.h | 4.5 KB | 3678 | 5 years | docs | |
| SmithWaterman.h | 4.5 KB | 3550 | 5 years | Update copyright years. Happy New Year | |
| OptionArg.h | 4.7 KB | 3114 | 9 years | update copyright years | |
| VectorMutable.cc | 4.7 KB | 3987 | 21 months | merge release 0.17.2 into trunk | |
| DataWeightProxy.h | 4.7 KB | 3550 | 5 years | Update copyright years. Happy New Year | |
| NNI.h | 4.9 KB | 2119 | 12 years | converted files to utf-8. fixes #577 | |
| BLAS_level3.h | 5.1 KB | 3908 | 2 years | #closes #881 Lift out expression classes to their own files, so they … | |
| Vector.cc | 5.2 KB | 4089 | 9 months | updating copyright years | |
| Makefile.am | 5.2 KB | 4089 | 9 months | updating copyright years | |
| Range.h | 5.3 KB | 3259 | 8 years | deprecated class Range. closes #786 | |
| KernelMatrix.h | 5.6 KB | 3190 | 8 years | new class KernelMatrix?. closes #381 | |
| MergeIterator.h | 5.7 KB | 3792 | 3 years | update copyright years | |
| utility.cc | 5.7 KB | 4097 | 8 months | use boost when functionality is available; prefer passing const& … | |
| Vector.h | 5.9 KB | 3938 | 23 months | let configure fail if compiler is not a C++11 compiler. … | |
| MatrixWeighted.cc | 6.0 KB | 4089 | 9 months | updating copyright years | |
| SegmentSet.h | 6.1 KB | 4039 | 16 months | Using me::value_type propagated to compilation errors and created … | |
| WeightedIteratorArchetype.h | 6.2 KB | 3579 | 5 years | merge release 0.14 into trunk | |
| WeightedIterator.h | 6.2 KB | 3461 | 6 years | docs | |
| VectorView.h | 6.3 KB | 3661 | 5 years | update copyright years | |
| StreamRedirect.h | 6.4 KB | 2061 | 13 years | removed include not needed | |
| multiprocess.h | 6.4 KB | 4076 | 9 months | fixed docs typo | |
| VectorMutable.h | 6.6 KB | 3661 | 5 years | update copyright years | |
| MatrixWeighted.h | 6.8 KB | 3938 | 23 months | let configure fail if compiler is not a C++11 compiler. … | |
| BasicQueue.h | 6.8 KB | 4043 | 15 months | Add capacity to Queue and PriorityQueue?, which is a feature to limit … | |
| CommandLine.cc | 6.9 KB | 3792 | 3 years | update copyright years | |
| sort_index.h | 7.0 KB | 3550 | 5 years | Update copyright years. Happy New Year | |
| Aligner.cc | 7.1 KB | 4089 | 9 months | updating copyright years | |
| CommandLine.h | 7.2 KB | 3188 | 8 years | merge patch release 0.11.2 | |
| VectorBase.cc | 8.0 KB | 3871 | 2 years | closes #932 | |
| concept_check.h | 8.0 KB | 3792 | 3 years | update copyright years | |
| Segment.h | 8.2 KB | 4089 | 9 months | updating copyright years | |
| merge.h | 9.2 KB | 3225 | 8 years | make code more readable | |
| VectorBase.h | 9.6 KB | 3871 | 2 years | closes #932 | |
| Aligner.h | 10.1 KB | 4089 | 9 months | updating copyright years | |
| SegmentTree.h | 10.5 KB | 4032 | 16 months | merge release 0.18.1 into trunk | |
| DiagonalMatrix.h | 10.5 KB | 4105 | 8 months | implement +=, -=, and *= operators for DiagonalMatrix?; prefer using … | |
| iterator_traits.h | 11.2 KB | 3550 | 5 years | Update copyright years. Happy New Year | |
| Scheduler.h | 11.2 KB | 3948 | 22 months | replace boost::thread with std::thread in Scheduler. refs #953 | |
| Matrix.cc | 11.4 KB | 4089 | 9 months | updating copyright years | |
| boost_exception_ptr.h | 13.2 KB | 3047 | 9 years | add missing Id tag | |
| Scheduler.cc | 13.9 KB | 3948 | 22 months | replace boost::thread with std::thread in Scheduler. refs #953 | |
| Matrix.h | 19.1 KB | 4106 | 8 months | docs: c++11 is required | |
| Ranking.h | 21.5 KB | 4087 | 9 months | extend docs; closes #710 | |
| utility.h | 22.5 KB | 4102 | 8 months | add wrapper function that calls std::string::contains, ::starts_with, … | |
| stl_utility.h | 24.6 KB | 3792 | 3 years | update copyright years | |
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