Changeset 1497 for trunk/yat


Ignore:
Timestamp:
Sep 12, 2008, 8:30:41 PM (13 years ago)
Author:
Peter
Message:

changing name to normalizer - closes #416

Location:
trunk/yat
Files:
1 edited
6 copied
1 moved

Legend:

Unmodified
Added
Removed
  • trunk/yat/Makefile.am

    r1487 r1497  
    2222# along with yat. If not, see <http://www.gnu.org/licenses/>.
    2323
    24 SUBDIRS = classifier normalization random regression statistics utility
     24SUBDIRS = classifier normalizer random regression statistics utility
    2525
    2626lib_LTLIBRARIES = libyat.la
     
    3535libyat_la_LIBADD = \
    3636  classifier/libclassifier.la \
    37   normalization/libnormalization.la \
     37  normalizer/libnormalizer.la \
    3838  random/librandom.la \
    3939  regression/libregression.la \
  • trunk/yat/normalizer/Centralizer.h

    r1496 r1497  
    1 #ifndef _theplu_yat_normalization_centralizer_
    2 #define _theplu_yat_normalization_centralizer_
     1#ifndef _theplu_yat_normalizer_centralizer_
     2#define _theplu_yat_normalizer_centralizer_
    33
    44/*
     
    2828namespace theplu {
    2929namespace yat {
    30 namespace normalization {
     30namespace normalizer {
    3131
    3232  /**
     
    8282  };
    8383
    84 }}} // end of namespace normalization, yat and thep
     84}}} // end of namespace normalizer, yat and thep
    8585#endif
  • trunk/yat/normalizer/ColumnNormalizer.h

    r1496 r1497  
    1 #ifndef _theplu_yat_normalization_column_normalizer_
    2 #define _theplu_yat_normalization_column_normalizer_
     1#ifndef _theplu_yat_normalizer_column_normalizer_
     2#define _theplu_yat_normalizer_column_normalizer_
    33
    44/*
     
    2525namespace theplu {
    2626namespace yat {
    27 namespace normalization {
     27namespace normalizer {
    2828
    2929  /**
     
    7676
    7777
    78 }}} // end of namespace normalization, yat and thep
     78}}} // end of namespace normalizer, yat and thep
    7979#endif
  • trunk/yat/normalizer/Makefile.am

    r1496 r1497  
    2020# along with yat. If not, see <http://www.gnu.org/licenses/>.
    2121
    22 noinst_LTLIBRARIES = libnormalization.la
    23 libnormalization_la_SOURCES = QuantileNormalizer.cc
     22noinst_LTLIBRARIES = libnormalizer.la
     23libnormalizer_la_SOURCES = QuantileNormalizer.cc
    2424
    25 include_normalizationdir = $(includedir)/yat/normalization
     25include_normalizerdir = $(includedir)/yat/normalizer
    2626
    27 include_normalization_HEADERS = Centralizer.h ColumnNormalizer.h \
     27include_normalizer_HEADERS = Centralizer.h ColumnNormalizer.h \
    2828  QuantileNormalizer.h Spearman.h
  • trunk/yat/normalizer/QuantileNormalizer.cc

    r1496 r1497  
    3333namespace theplu {
    3434namespace yat {
    35 namespace normalization {
     35namespace normalizer {
    3636
    3737  void QuantileNormalizer::operator()(const utility::Matrix& data,
  • trunk/yat/normalizer/QuantileNormalizer.h

    r1496 r1497  
    1 #ifndef _theplu_yat_normalization_quantile_normalizer_
    2 #define _theplu_yat_normalization_quantile_normalizer_
     1#ifndef _theplu_yat_normalizer_quantile_normalizer_
     2#define _theplu_yat_normalizer_quantile_normalizer_
    33
    44/*
     
    2626  class Matrix;
    2727}
    28 namespace normalization {
     28namespace normalizer {
    2929
    3030  /**
    31      \brief Perform quantile normalization
     31     \brief Perform quantile normalizer
    3232
    3333     \since New in yat 0.5
     
    4141       in step 1. This results in a \a matrix in which each column has
    4242       the same distribution of data, and the rank of an element
    43        within a column is preserved in the normalization.
     43       within a column is preserved in the normalizer.
    4444
    4545       \note Number of rows in \a matrix and \a result must match.
     
    4949  };
    5050
    51 }}} // end of namespace normalization, yat and thep
     51}}} // end of namespace normalizer, yat and thep
    5252#endif
  • trunk/yat/normalizer/Spearman.h

    r1496 r1497  
    1 #ifndef _theplu_yat_normalization_spearman_
    2 #define _theplu_yat_normalization_spearman_
     1#ifndef _theplu_yat_normalizer_spearman_
     2#define _theplu_yat_normalizer_spearman_
    33
    44/*
     
    2828namespace theplu {
    2929namespace yat {
    30 namespace normalization {
     30namespace normalizer {
    3131
    3232  /**
     
    6868  };
    6969
    70 }}} // end of namespace normalization, yat and thep
     70}}} // end of namespace normalizer, yat and thep
    7171#endif
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